Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
RAB4AP20338 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB4AP20338 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB4AP20338 AC102953.2-201ENST00000609755 3026 ntBASIC11.74□□□□□ -0.53
RAB4AP20338 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RAB4AP20338 LINC00477-201ENST00000483544 1710 ntTSL 2 BASIC11.74□□□□□ -0.53
RAB4AP20338 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC11.74□□□□□ -0.53
RAB4AP20338 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
RAB4AP20338 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RAB4AP20338 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB4AP20338 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB4AP20338 EIF3L-214ENST00000624234 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB4AP20338 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC11.74□□□□□ -0.53
RAB4AP20338 MARVELD2-201ENST00000325631 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB4AP20338 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB4AP20338 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB4AP20338 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB4AP20338 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB4AP20338 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB4AP20338 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RAB4AP20338 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB4AP20338 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
RAB4AP20338 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC11.73□□□□□ -0.53
RAB4AP20338 EPB41L5-201ENST00000263713 6628 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RAB4AP20338 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB4AP20338 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB4AP20338 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB4AP20338 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
RAB4AP20338 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RAB4AP20338 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB4AP20338 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB4AP20338 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
RAB4AP20338 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC11.73□□□□□ -0.53
RAB4AP20338 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RAB4AP20338 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RAB4AP20338 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB4AP20338 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
RAB4AP20338 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB4AP20338 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RAB4AP20338 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RAB4AP20338 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB4AP20338 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB4AP20338 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC11.73□□□□□ -0.53
RAB4AP20338 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC11.73□□□□□ -0.53
RAB4AP20338 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB4AP20338 PTCHD3P3-201ENST00000403073 906 ntBASIC11.73□□□□□ -0.53
RAB4AP20338 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RAB4AP20338 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
RAB4AP20338 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RAB4AP20338 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC11.73□□□□□ -0.53
RAB4AP20338 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC11.73□□□□□ -0.53
RAB4AP20338 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
RAB4AP20338 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RAB4AP20338 TOB2P1-201ENST00000469761 992 ntBASIC11.73□□□□□ -0.53
RAB4AP20338 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RAB4AP20338 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC11.73□□□□□ -0.53
RAB4AP20338 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC11.73□□□□□ -0.53
RAB4AP20338 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB4AP20338 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB4AP20338 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB4AP20338 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC11.73□□□□□ -0.53
RAB4AP20338 TPSP2-201ENST00000561760 610 ntBASIC11.73□□□□□ -0.53
RAB4AP20338 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC11.73□□□□□ -0.53
RAB4AP20338 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RAB4AP20338 MIR5100-201ENST00000579544 119 ntBASIC11.73□□□□□ -0.53
RAB4AP20338 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC11.73□□□□□ -0.53
RAB4AP20338 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB4AP20338 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC11.73□□□□□ -0.53
RAB4AP20338 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB4AP20338 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB4AP20338 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB4AP20338 AC097493.4-201ENST00000641197 219 ntBASIC11.73□□□□□ -0.53
RAB4AP20338 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB4AP20338 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC11.73□□□□□ -0.53
RAB4AP20338 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
RAB4AP20338 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB4AP20338 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC11.73□□□□□ -0.53
RAB4AP20338 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
RAB4AP20338 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB4AP20338 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
RAB4AP20338 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB4AP20338 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RAB4AP20338 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RAB4AP20338 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB4AP20338 TRAF3-201ENST00000347662 7700 ntTSL 5 BASIC11.72□□□□□ -0.53
RAB4AP20338 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB4AP20338 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC11.72□□□□□ -0.53
RAB4AP20338 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC11.72□□□□□ -0.53
RAB4AP20338 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
RAB4AP20338 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB4AP20338 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RAB4AP20338 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC11.72□□□□□ -0.53
RAB4AP20338 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC11.72□□□□□ -0.53
RAB4AP20338 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RAB4AP20338 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC11.72□□□□□ -0.53
RAB4AP20338 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
RAB4AP20338 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
RAB4AP20338 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC11.72□□□□□ -0.53
RAB4AP20338 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RAB4AP20338 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms