RNA–Protein interactions for RNA: ENST00000457153.6

SYT1-204, Transcript of synaptotagmin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYT1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-204ENST00000457153 NISCHQ9Y2I1 1504 aa26.95■■□□□ 1.9
SYT1-204ENST00000457153 DCAF8L2P0C7V8 631 aa24.21■■□□□ 1.47
SYT1-204ENST00000457153 SHROOM4Q9ULL8 1493 aa23.85■■□□□ 1.41
SYT1-204ENST00000457153 SUPT5HO00267 1087 aaKnown RBP23.82■■□□□ 1.4
SYT1-204ENST00000457153 CCDC180Q9P1Z9 1646 aa22.66■■□□□ 1.22
SYT1-204ENST00000457153 ZCCHC6Q5VYS8 1495 aaKnown RBP22.61■■□□□ 1.21
SYT1-204ENST00000457153 CHIC1Q5VXU3 224 aa22.43■■□□□ 1.18
SYT1-204ENST00000457153 PCGF6Q9BYE7 350 aa22.33■■□□□ 1.16
SYT1-204ENST00000457153 TRIM41Q8WV44 630 aa22.28■■□□□ 1.16
SYT1-204ENST00000457153 FAM9AQ8IZU1 332 aaPredicted RBP22.13■■□□□ 1.13
SYT1-204ENST00000457153 EHMT2Q96KQ7 1210 aa22.07■■□□□ 1.12
SYT1-204ENST00000457153 ZEB1P37275 1124 aaPredicted RBP21.99■■□□□ 1.11
SYT1-204ENST00000457153 HRCP23327 699 aa21.96■■□□□ 1.11
SYT1-204ENST00000457153 DCAF1Q9Y4B6 1507 aa21.92■■□□□ 1.1
SYT1-204ENST00000457153 TRIM26Q12899 539 aaPredicted RBP21.9■■□□□ 1.1
SYT1-204ENST00000457153 LOC105371045A0A1W2PR82 267 aa21.85■■□□□ 1.09
SYT1-204ENST00000457153 ABCC9O60706 1549 aa21.81■■□□□ 1.08
SYT1-204ENST00000457153 APLP2Q06481 763 aa21.7■■□□□ 1.06
SYT1-204ENST00000457153 SCRIBQ14160 1630 aa21.64■■□□□ 1.05
SYT1-204ENST00000457153 UBTFP17480 764 aaKnown RBP21.53■■□□□ 1.04
SYT1-204ENST00000457153 CCER1Q8TC90 406 aaPredicted RBP21.49■■□□□ 1.03
SYT1-204ENST00000457153 MYO15BQ96JP2 1530 aa21.42■■□□□ 1.02
SYT1-204ENST00000457153 NACADO15069 1562 aa21.4■■□□□ 1.02
SYT1-204ENST00000457153 RSF1Q96T23 1441 aaPredicted RBP21.4■■□□□ 1.02
SYT1-204ENST00000457153 TTBK1Q5TCY1 1321 aaPredicted RBP21.39■■□□□ 1.01
SYT1-204ENST00000457153 PPARGC1BQ86YN6 1023 aaKnown RBP21.26■□□□□ 0.99
SYT1-204ENST00000457153 RB1CC1Q8TDY2 1594 aa21.22■□□□□ 0.99
SYT1-204ENST00000457153 CENPBP07199 599 aaPredicted RBP21.16■□□□□ 0.98
SYT1-204ENST00000457153 PABPN1Q86U42 306 aaKnown RBP eCLIP21.14■□□□□ 0.98
SYT1-204ENST00000457153 RANGAP1P46060 587 aaPredicted RBP21.13■□□□□ 0.97
SYT1-204ENST00000457153 CSRNP3Q8WYN3 585 aa20.99■□□□□ 0.95
SYT1-204ENST00000457153 BAZ1AQ9NRL2 1556 aaPredicted RBP20.96■□□□□ 0.95
SYT1-204ENST00000457153 PELP1Q8IZL8 1130 aaKnown RBP20.93■□□□□ 0.94
SYT1-204ENST00000457153 CECR2Q9BXF3 1484 aa20.92■□□□□ 0.94
SYT1-204ENST00000457153 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.92■□□□□ 0.94
SYT1-204ENST00000457153 MROH2BQ7Z745 1585 aa20.82■□□□□ 0.92
SYT1-204ENST00000457153 EEA1Q15075 1411 aa20.82■□□□□ 0.92
SYT1-204ENST00000457153 HNRNPUL2Q1KMD3 747 aaKnown RBP20.8■□□□□ 0.92
SYT1-204ENST00000457153 ATP1B4Q9UN42 357 aaPredicted RBP20.74■□□□□ 0.91
SYT1-204ENST00000457153 DIEXFQ68CQ4 756 aaKnown RBP20.7■□□□□ 0.9
SYT1-204ENST00000457153 TNIKQ9UKE5 1360 aa20.59■□□□□ 0.89
SYT1-204ENST00000457153 WIZO95785 1651 aa20.59■□□□□ 0.89
SYT1-204ENST00000457153 WRNQ14191 1432 aaPredicted RBP eCLIP20.58■□□□□ 0.88
SYT1-204ENST00000457153 GOLGA3Q08378 1498 aa20.58■□□□□ 0.88
SYT1-204ENST00000457153 CEP162Q5TB80 1403 aa20.57■□□□□ 0.88
SYT1-204ENST00000457153 TOP2AP11388 1531 aaKnown RBP20.56■□□□□ 0.88
SYT1-204ENST00000457153 YTHDC1Q96MU7 727 aaKnown RBP20.54■□□□□ 0.88
SYT1-204ENST00000457153 CCDC88BA6NC98 1476 aa20.52■□□□□ 0.88
SYT1-204ENST00000457153 BAZ1BQ9UIG0 1483 aaKnown RBP20.51■□□□□ 0.87
SYT1-204ENST00000457153 ITGAEP38570 1179 aa20.5■□□□□ 0.87
SYT1-204ENST00000457153 ZNF316A6NFI3 1004 aaPredicted RBP20.49■□□□□ 0.87
SYT1-204ENST00000457153 CEP164Q9UPV0 1460 aa20.45■□□□□ 0.86
SYT1-204ENST00000457153 CLIP1P30622 1438 aa20.45■□□□□ 0.86
SYT1-204ENST00000457153 SMARCA4P51532 1647 aa20.41■□□□□ 0.86
SYT1-204ENST00000457153 ABCC8Q09428 1581 aa20.35■□□□□ 0.85
SYT1-204ENST00000457153 SOGA1O94964 1423 aa20.35■□□□□ 0.85
SYT1-204ENST00000457153 SMARCA2P51531 1590 aa20.32■□□□□ 0.84
SYT1-204ENST00000457153 ACIN1Q9UKV3 1341 aaKnown RBP20.28■□□□□ 0.84
SYT1-204ENST00000457153 FAM50AQ14320 339 aaKnown RBP20.27■□□□□ 0.84
SYT1-204ENST00000457153 NEFLP07196 543 aa20.23■□□□□ 0.83
SYT1-204ENST00000457153 KIF27Q86VH2 1401 aa20.21■□□□□ 0.83
SYT1-204ENST00000457153 MYT1Q01538 1121 aa20.17■□□□□ 0.82
SYT1-204ENST00000457153 GTF3C3Q9Y5Q9 886 aa20.17■□□□□ 0.82
SYT1-204ENST00000457153 ATAD2BQ9ULI0 1458 aa20.13■□□□□ 0.81
SYT1-204ENST00000457153 VPS8Q8N3P4 1428 aa20.11■□□□□ 0.81
SYT1-204ENST00000457153 P3H3Q8IVL6 736 aa20.05■□□□□ 0.8
SYT1-204ENST00000457153 CLSPNQ9HAW4 1339 aa20.04■□□□□ 0.8
SYT1-204ENST00000457153 NEUROD1Q13562 356 aa20.03■□□□□ 0.8
SYT1-204ENST00000457153 RUSC2Q8N2Y8 1516 aa19.95■□□□□ 0.78
SYT1-204ENST00000457153 SCAF1Q9H7N4 1312 aaKnown RBP19.94■□□□□ 0.78
SYT1-204ENST00000457153 TRIM52Q96A61 297 aa19.9■□□□□ 0.78
SYT1-204ENST00000457153 ANP32CO43423 234 aa19.88■□□□□ 0.77
SYT1-204ENST00000457153 CUX2O14529 1486 aa19.86■□□□□ 0.77
SYT1-204ENST00000457153 RAPGEF2Q9Y4G8 1499 aa19.86■□□□□ 0.77
SYT1-204ENST00000457153 FHAD1B1AJZ9 1412 aa19.84■□□□□ 0.77
SYT1-204ENST00000457153 CARMIL1Q5VZK9 1371 aa19.84■□□□□ 0.77
SYT1-204ENST00000457153 MIER1Q8N108 512 aa19.83■□□□□ 0.77
SYT1-204ENST00000457153 CCNB3Q8WWL7 1395 aa19.82■□□□□ 0.76
SYT1-204ENST00000457153 MTUS2Q5JR59 1369 aa19.8■□□□□ 0.76
SYT1-204ENST00000457153 KIF21BO75037 1637 aa19.8■□□□□ 0.76
SYT1-204ENST00000457153 TONSLQ96HA7 1378 aa19.78■□□□□ 0.76
SYT1-204ENST00000457153 ERICH6Q7L0X2 663 aa19.77■□□□□ 0.76
SYT1-204ENST00000457153 CDK11AQ9UQ88 783 aaPredicted RBP19.77■□□□□ 0.76
SYT1-204ENST00000457153 NCAPD3P42695 1498 aa19.76■□□□□ 0.75
SYT1-204ENST00000457153 CADPSQ9ULU8 1353 aa19.74■□□□□ 0.75
SYT1-204ENST00000457153 SYNJ1O43426 1573 aa19.7■□□□□ 0.74
SYT1-204ENST00000457153 BICRAQ9NZM4 1560 aa19.69■□□□□ 0.74
SYT1-204ENST00000457153 KANK4Q5T7N3 995 aaPredicted RBP19.69■□□□□ 0.74
SYT1-204ENST00000457153 PEG3Q9GZU2 1588 aa19.69■□□□□ 0.74
SYT1-204ENST00000457153 POLR3GLQ9BT43 218 aa19.65■□□□□ 0.74
SYT1-204ENST00000457153 ERICH3Q5RHP9 1530 aa19.64■□□□□ 0.73
SYT1-204ENST00000457153 TIMELESSQ9UNS1 1208 aa19.64■□□□□ 0.73
SYT1-204ENST00000457153 DDX10Q13206 875 aaKnown RBP19.63■□□□□ 0.73
SYT1-204ENST00000457153 TOP2BQ02880 1626 aa19.61■□□□□ 0.73
SYT1-204ENST00000457153 HMGXB3Q12766 1538 aa19.6■□□□□ 0.73
SYT1-204ENST00000457153 EIF4G1Q04637 1599 aaKnown RBP19.6■□□□□ 0.73
SYT1-204ENST00000457153 UNC13AQ9UPW8 1703 aa19.59■□□□□ 0.73
SYT1-204ENST00000457153 SETD5Q9C0A6 1442 aa19.59■□□□□ 0.73
SYT1-204ENST00000457153 FBLN2P98095 1184 aa19.58■□□□□ 0.73
SYT1-204ENST00000457153 ARID3CA6NKF2 412 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms