RNA–Protein interactions for RNA: ENST00000300107.7

CLPX-201, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPX, Length 4,695 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-201ENST00000300107 DCAF8L2P0C7V8 631 aa22.09■■□□□ 1.13
CLPX-201ENST00000300107 SUPT5HO00267 1087 aaKnown RBP21.03■□□□□ 0.96
CLPX-201ENST00000300107 NISCHQ9Y2I1 1504 aa20.92■□□□□ 0.94
CLPX-201ENST00000300107 SHROOM4Q9ULL8 1493 aa20.54■□□□□ 0.88
CLPX-201ENST00000300107 PELP1Q8IZL8 1130 aaKnown RBP20.33■□□□□ 0.85
CLPX-201ENST00000300107 EHMT2Q96KQ7 1210 aa20.23■□□□□ 0.83
CLPX-201ENST00000300107 PCGF6Q9BYE7 350 aa20.14■□□□□ 0.81
CLPX-201ENST00000300107 APLP2Q06481 763 aa19.84■□□□□ 0.77
CLPX-201ENST00000300107 CENPBP07199 599 aaPredicted RBP19.82■□□□□ 0.76
CLPX-201ENST00000300107 ZEB1P37275 1124 aaPredicted RBP19.82■□□□□ 0.76
CLPX-201ENST00000300107 FAM9AQ8IZU1 332 aaPredicted RBP19.8■□□□□ 0.76
CLPX-201ENST00000300107 TTBK1Q5TCY1 1321 aaPredicted RBP19.61■□□□□ 0.73
CLPX-201ENST00000300107 MYT1Q01538 1121 aa19.58■□□□□ 0.72
CLPX-201ENST00000300107 CCER1Q8TC90 406 aaPredicted RBP19.58■□□□□ 0.72
CLPX-201ENST00000300107 TRIM41Q8WV44 630 aa19.45■□□□□ 0.7
CLPX-201ENST00000300107 ERICH6Q7L0X2 663 aa19.45■□□□□ 0.7
CLPX-201ENST00000300107 HRCP23327 699 aa19.39■□□□□ 0.69
CLPX-201ENST00000300107 RANGAP1P46060 587 aaPredicted RBP19.35■□□□□ 0.69
CLPX-201ENST00000300107 YTHDC1Q96MU7 727 aaKnown RBP19.25■□□□□ 0.67
CLPX-201ENST00000300107 TRIM26Q12899 539 aaPredicted RBP19.25■□□□□ 0.67
CLPX-201ENST00000300107 NEFLP07196 543 aa19.19■□□□□ 0.66
CLPX-201ENST00000300107 UBTFP17480 764 aaKnown RBP19.13■□□□□ 0.65
CLPX-201ENST00000300107 ATP1B4Q9UN42 357 aaPredicted RBP19.07■□□□□ 0.64
CLPX-201ENST00000300107 PPARGC1BQ86YN6 1023 aaKnown RBP19.04■□□□□ 0.64
CLPX-201ENST00000300107 CHIC1Q5VXU3 224 aa18.95■□□□□ 0.62
CLPX-201ENST00000300107 LOC105371045A0A1W2PR82 267 aa18.91■□□□□ 0.62
CLPX-201ENST00000300107 DIEXFQ68CQ4 756 aaKnown RBP18.67■□□□□ 0.58
CLPX-201ENST00000300107 HNRNPUL2Q1KMD3 747 aaKnown RBP18.62■□□□□ 0.57
CLPX-201ENST00000300107 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.6■□□□□ 0.57
CLPX-201ENST00000300107 ITGAEP38570 1179 aa18.56■□□□□ 0.56
CLPX-201ENST00000300107 DAXXQ9UER7 740 aaPredicted RBP18.52■□□□□ 0.55
CLPX-201ENST00000300107 GTF3C3Q9Y5Q9 886 aa18.47■□□□□ 0.55
CLPX-201ENST00000300107 PABPN1Q86U42 306 aaKnown RBP eCLIP18.37■□□□□ 0.53
CLPX-201ENST00000300107 POLR3GLQ9BT43 218 aa18.37■□□□□ 0.53
CLPX-201ENST00000300107 RTL5Q5HYW3 569 aaPredicted RBP18.33■□□□□ 0.52
CLPX-201ENST00000300107 ABCC9O60706 1549 aa18.33■□□□□ 0.52
CLPX-201ENST00000300107 MYT1LQ9UL68 1186 aa18.31■□□□□ 0.52
CLPX-201ENST00000300107 ACIN1Q9UKV3 1341 aaKnown RBP18.26■□□□□ 0.51
CLPX-201ENST00000300107 CNGB1Q14028 1251 aaPredicted RBP18.25■□□□□ 0.51
CLPX-201ENST00000300107 ZNF316A6NFI3 1004 aaPredicted RBP18.19■□□□□ 0.5
CLPX-201ENST00000300107 BCANQ96GW7 911 aa18.19■□□□□ 0.5
CLPX-201ENST00000300107 CDK11AQ9UQ88 783 aaPredicted RBP18.07■□□□□ 0.48
CLPX-201ENST00000300107 CLSPNQ9HAW4 1339 aa18.05■□□□□ 0.48
CLPX-201ENST00000300107 ANP32CO43423 234 aa18.05■□□□□ 0.48
CLPX-201ENST00000300107 FAM50AQ14320 339 aaKnown RBP18.04■□□□□ 0.48
CLPX-201ENST00000300107 NEUROD1Q13562 356 aa18.04■□□□□ 0.48
CLPX-201ENST00000300107 TRIM52Q96A61 297 aa17.91■□□□□ 0.46
CLPX-201ENST00000300107 FBLN2P98095 1184 aa17.85■□□□□ 0.45
CLPX-201ENST00000300107 DCAF1Q9Y4B6 1507 aa17.83■□□□□ 0.44
CLPX-201ENST00000300107 SLC4A1APQ9BWU0 796 aaKnown RBP17.81■□□□□ 0.44
CLPX-201ENST00000300107 SCAF1Q9H7N4 1312 aaKnown RBP17.78■□□□□ 0.44
CLPX-201ENST00000300107 CSRNP3Q8WYN3 585 aa17.77■□□□□ 0.43
CLPX-201ENST00000300107 ANP32AP39687 249 aaKnown RBP17.76■□□□□ 0.43
CLPX-201ENST00000300107 FKBP8Q14318 412 aa17.75■□□□□ 0.43
CLPX-201ENST00000300107 ZNF326Q5BKZ1 582 aaKnown RBP17.72■□□□□ 0.43
CLPX-201ENST00000300107 ARID3CA6NKF2 412 aa17.7■□□□□ 0.42
CLPX-201ENST00000300107 P3H3Q8IVL6 736 aa17.7■□□□□ 0.42
CLPX-201ENST00000300107 NPM2Q86SE8 214 aaKnown RBP17.58■□□□□ 0.41
CLPX-201ENST00000300107 HNRNPUQ00839 825 aaKnown RBP eCLIP17.57■□□□□ 0.4
CLPX-201ENST00000300107 DDX10Q13206 875 aaKnown RBP17.57■□□□□ 0.4
CLPX-201ENST00000300107 MIER1Q8N108 512 aa17.54■□□□□ 0.4
CLPX-201ENST00000300107 ZBTB47Q9UFB7 747 aaPredicted RBP17.54■□□□□ 0.4
CLPX-201ENST00000300107 EIF5BO60841 1220 aaKnown RBP17.53■□□□□ 0.4
CLPX-201ENST00000300107 CANXP27824 592 aaKnown RBP17.53■□□□□ 0.4
CLPX-201ENST00000300107 TONSLQ96HA7 1378 aa17.48■□□□□ 0.39
CLPX-201ENST00000300107 SCRIBQ14160 1630 aa17.45■□□□□ 0.38
CLPX-201ENST00000300107 ZNF777Q9ULD5 760 aaPredicted RBP17.44■□□□□ 0.38
CLPX-201ENST00000300107 FAM9BQ8IZU0 186 aa17.43■□□□□ 0.38
CLPX-201ENST00000300107 CCDC136Q96JN2 1154 aa17.4■□□□□ 0.38
CLPX-201ENST00000300107 NBR1Q14596 966 aa17.39■□□□□ 0.37
CLPX-201ENST00000300107 BCL11AQ9H165 835 aa17.35■□□□□ 0.37
CLPX-201ENST00000300107 MYO15BQ96JP2 1530 aa17.32■□□□□ 0.36
CLPX-201ENST00000300107 NEFMP07197 916 aa17.32■□□□□ 0.36
CLPX-201ENST00000300107 ANP32BQ92688 251 aaKnown RBP17.32■□□□□ 0.36
CLPX-201ENST00000300107 ANP32EQ9BTT0 268 aa17.3■□□□□ 0.36
CLPX-201ENST00000300107 UPF2Q9HAU5 1272 aaKnown RBP17.3■□□□□ 0.36
CLPX-201ENST00000300107 GLIPR1L2Q4G1C9 344 aa17.29■□□□□ 0.36
CLPX-201ENST00000300107 MRS2Q9HD23 443 aa17.28■□□□□ 0.36
CLPX-201ENST00000300107 TMC1Q8TDI8 760 aa17.28■□□□□ 0.36
CLPX-201ENST00000300107 IRX6P78412 446 aaPredicted RBP17.27■□□□□ 0.36
CLPX-201ENST00000300107 ZCCHC6Q5VYS8 1495 aaKnown RBP17.26■□□□□ 0.35
CLPX-201ENST00000300107 SALL2Q9Y467 1007 aaPredicted RBP17.26■□□□□ 0.35
CLPX-201ENST00000300107 HSP90AA1P07900 732 aaKnown RBP17.25■□□□□ 0.35
CLPX-201ENST00000300107 HIRIP3Q9BW71 556 aaPredicted RBP17.2■□□□□ 0.34
CLPX-201ENST00000300107 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.18■□□□□ 0.34
CLPX-201ENST00000300107 SLC24A1O60721 1099 aa17.17■□□□□ 0.34
CLPX-201ENST00000300107 PLPPR3Q6T4P5 718 aa17.16■□□□□ 0.34
CLPX-201ENST00000300107 CHGAP10645 457 aaKnown RBP17.15■□□□□ 0.34
CLPX-201ENST00000300107 CCDC180Q9P1Z9 1646 aa17.14■□□□□ 0.33
CLPX-201ENST00000300107 CLIP1P30622 1438 aa17.14■□□□□ 0.33
CLPX-201ENST00000300107 CHIC2Q9UKJ5 165 aa17.14■□□□□ 0.33
CLPX-201ENST00000300107 EIF4G2P78344 907 aaKnown RBP eCLIP17.12■□□□□ 0.333e-6■■■■■ 37.9
CLPX-201ENST00000300107 NPM1P06748 294 aaKnown RBP eCLIP17.1■□□□□ 0.33
CLPX-201ENST00000300107 ESF1Q9H501 851 aaKnown RBP17.09■□□□□ 0.33
CLPX-201ENST00000300107 ARXQ96QS3 562 aa17.09■□□□□ 0.33
CLPX-201ENST00000300107 SUPT16HQ9Y5B9 1047 aaKnown RBP17.07■□□□□ 0.32
CLPX-201ENST00000300107 CEP162Q5TB80 1403 aa17.06■□□□□ 0.32
CLPX-201ENST00000300107 WDR43Q15061 677 aaKnown RBP eCLIP17.06■□□□□ 0.32
CLPX-201ENST00000300107 DDRGK1Q96HY6 314 aa17.05■□□□□ 0.32
CLPX-201ENST00000300107 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms