RNA–Protein interactions for RNA: ENST00000434651.6

HLA-DQB1-205, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,642 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-205ENST00000434651 NISCHQ9Y2I1 1504 aa36.34■■■■□ 3.41
HLA-DQB1-205ENST00000434651 CCDC180Q9P1Z9 1646 aa32.08■■■□□ 2.73
HLA-DQB1-205ENST00000434651 ABCC9O60706 1549 aa31.42■■■□□ 2.62
HLA-DQB1-205ENST00000434651 DCAF8L2P0C7V8 631 aa30.44■■■□□ 2.46
HLA-DQB1-205ENST00000434651 ZCCHC6Q5VYS8 1495 aaKnown RBP30.3■■■□□ 2.44
HLA-DQB1-205ENST00000434651 RB1CC1Q8TDY2 1594 aa30.12■■■□□ 2.41
HLA-DQB1-205ENST00000434651 NACADO15069 1562 aa30.11■■■□□ 2.41
HLA-DQB1-205ENST00000434651 MYO15BQ96JP2 1530 aa29.93■■■□□ 2.38
HLA-DQB1-205ENST00000434651 DCAF1Q9Y4B6 1507 aa29.93■■■□□ 2.38
HLA-DQB1-205ENST00000434651 UNC13AQ9UPW8 1703 aa29.62■■■□□ 2.33
HLA-DQB1-205ENST00000434651 SCRIBQ14160 1630 aa29.49■■■□□ 2.31
HLA-DQB1-205ENST00000434651 PABPN1Q86U42 306 aaKnown RBP eCLIP29.48■■■□□ 2.31
HLA-DQB1-205ENST00000434651 BICRAQ9NZM4 1560 aa29.36■■■□□ 2.29
HLA-DQB1-205ENST00000434651 SHROOM4Q9ULL8 1493 aa29.07■■■□□ 2.24
HLA-DQB1-205ENST00000434651 DNAJC5BQ9UF47 199 aa28.79■■■□□ 2.2
HLA-DQB1-205ENST00000434651 EIF4G1Q04637 1599 aaKnown RBP28.51■■■□□ 2.15
HLA-DQB1-205ENST00000434651 CECR2Q9BXF3 1484 aa28.42■■■□□ 2.14
HLA-DQB1-205ENST00000434651 CC2D2AQ9P2K1 1620 aa28.37■■■□□ 2.13
HLA-DQB1-205ENST00000434651 SMARCA4P51532 1647 aa28.15■■■□□ 2.1
HLA-DQB1-205ENST00000434651 MROH2BQ7Z745 1585 aa28.1■■■□□ 2.09
HLA-DQB1-205ENST00000434651 BAZ1AQ9NRL2 1556 aaPredicted RBP28.07■■■□□ 2.08
HLA-DQB1-205ENST00000434651 ATAD2BQ9ULI0 1458 aa27.95■■■□□ 2.06
HLA-DQB1-205ENST00000434651 NCAPD3P42695 1498 aa27.84■■■□□ 2.05
HLA-DQB1-205ENST00000434651 WIZO95785 1651 aa27.83■■■□□ 2.05
HLA-DQB1-205ENST00000434651 RSF1Q96T23 1441 aaPredicted RBP27.82■■■□□ 2.04
HLA-DQB1-205ENST00000434651 SMARCA2P51531 1590 aa27.82■■■□□ 2.04
HLA-DQB1-205ENST00000434651 PEG3Q9GZU2 1588 aa27.79■■■□□ 2.04
HLA-DQB1-205ENST00000434651 BAZ1BQ9UIG0 1483 aaKnown RBP27.7■■■□□ 2.02
HLA-DQB1-205ENST00000434651 HMGXB3Q12766 1538 aa27.68■■■□□ 2.02
HLA-DQB1-205ENST00000434651 SUPT5HO00267 1087 aaKnown RBP27.41■■□□□ 1.98
HLA-DQB1-205ENST00000434651 TOP2AP11388 1531 aaKnown RBP27.41■■□□□ 1.98
HLA-DQB1-205ENST00000434651 NESP48681 1621 aa27.31■■□□□ 1.96
HLA-DQB1-205ENST00000434651 CCDC88BA6NC98 1476 aa27.18■■□□□ 1.94
HLA-DQB1-205ENST00000434651 CADPSQ9ULU8 1353 aa27.07■■□□□ 1.92
HLA-DQB1-205ENST00000434651 LAMC3Q9Y6N6 1575 aa27.03■■□□□ 1.92
HLA-DQB1-205ENST00000434651 CFTRP13569 1480 aa26.95■■□□□ 1.91
HLA-DQB1-205ENST00000434651 ERCC6Q03468 1493 aa26.95■■□□□ 1.9
HLA-DQB1-205ENST00000434651 KIF21AQ7Z4S6 1674 aa26.92■■□□□ 1.9
HLA-DQB1-205ENST00000434651 PDS5BQ9NTI5 1447 aa26.85■■□□□ 1.89
HLA-DQB1-205ENST00000434651 FANCD2Q9BXW9 1451 aa26.79■■□□□ 1.88
HLA-DQB1-205ENST00000434651 PRDM2Q13029 1718 aa26.72■■□□□ 1.87
HLA-DQB1-205ENST00000434651 THOC2Q8NI27 1593 aaKnown RBP26.71■■□□□ 1.87
HLA-DQB1-205ENST00000434651 CEP164Q9UPV0 1460 aa26.69■■□□□ 1.86
HLA-DQB1-205ENST00000434651 MRC2Q9UBG0 1479 aa26.6■■□□□ 1.85
HLA-DQB1-205ENST00000434651 URB2Q14146 1524 aaKnown RBP26.56■■□□□ 1.84
HLA-DQB1-205ENST00000434651 WDR62O43379 1518 aa26.51■■□□□ 1.83
HLA-DQB1-205ENST00000434651 CUX2O14529 1486 aa26.48■■□□□ 1.83
HLA-DQB1-205ENST00000434651 TOPBP1Q92547 1522 aa26.39■■□□□ 1.82
HLA-DQB1-205ENST00000434651 ABCC8Q09428 1581 aa26.34■■□□□ 1.81
HLA-DQB1-205ENST00000434651 DNMBPQ6XZF7 1577 aa26.32■■□□□ 1.8
HLA-DQB1-205ENST00000434651 CUX1P39880 1505 aa26.32■■□□□ 1.8
HLA-DQB1-205ENST00000434651 POLA1P09884 1462 aaPredicted RBP26.2■■□□□ 1.78
HLA-DQB1-205ENST00000434651 SYNJ1O43426 1573 aa26.19■■□□□ 1.78
HLA-DQB1-205ENST00000434651 FGD5Q6ZNL6 1462 aa26.17■■□□□ 1.78
HLA-DQB1-205ENST00000434651 RAD54L2Q9Y4B4 1467 aa26.17■■□□□ 1.78
HLA-DQB1-205ENST00000434651 WRNQ14191 1432 aaPredicted RBP eCLIP26.17■■□□□ 1.78
HLA-DQB1-205ENST00000434651 ZNF608Q9ULD9 1512 aaPredicted RBP26.13■■□□□ 1.77
HLA-DQB1-205ENST00000434651 TARBP1Q13395 1621 aaKnown RBP26.1■■□□□ 1.77
HLA-DQB1-205ENST00000434651 IFT140Q96RY7 1462 aa26.09■■□□□ 1.77
HLA-DQB1-205ENST00000434651 SOGA1O94964 1423 aa26.08■■□□□ 1.77
HLA-DQB1-205ENST00000434651 TOP2BQ02880 1626 aa26.08■■□□□ 1.77
HLA-DQB1-205ENST00000434651 BIVM-ERCC5R4GMW8 1640 aa26.07■■□□□ 1.76
HLA-DQB1-205ENST00000434651 AQRO60306 1485 aaKnown RBP eCLIP26■■□□□ 1.75
HLA-DQB1-205ENST00000434651 TDRD9Q8NDG6 1382 aaKnown RBP26■■□□□ 1.75
HLA-DQB1-205ENST00000434651 EIF4G3O43432 1585 aaKnown RBP25.95■■□□□ 1.74
HLA-DQB1-205ENST00000434651 WDR97A6NE52 1622 aa25.91■■□□□ 1.74
HLA-DQB1-205ENST00000434651 ABCA10Q8WWZ4 1543 aa25.86■■□□□ 1.73
HLA-DQB1-205ENST00000434651 ABCA5Q8WWZ7 1642 aa25.77■■□□□ 1.72
HLA-DQB1-205ENST00000434651 GAPVD1Q14C86 1478 aa25.76■■□□□ 1.71
HLA-DQB1-205ENST00000434651 TRIM41Q8WV44 630 aa25.76■■□□□ 1.71
HLA-DQB1-205ENST00000434651 PBRM1Q86U86 1689 aa25.71■■□□□ 1.71
HLA-DQB1-205ENST00000434651 SNAPC4Q5SXM2 1469 aa25.7■■□□□ 1.7
HLA-DQB1-205ENST00000434651 GRIN2BQ13224 1484 aa25.68■■□□□ 1.7
HLA-DQB1-205ENST00000434651 CHIC1Q5VXU3 224 aa25.67■■□□□ 1.7
HLA-DQB1-205ENST00000434651 RUSC2Q8N2Y8 1516 aa25.65■■□□□ 1.7
HLA-DQB1-205ENST00000434651 FBLN2P98095 1184 aa25.65■■□□□ 1.7
HLA-DQB1-205ENST00000434651 CHD1O14646 1710 aa25.62■■□□□ 1.69
HLA-DQB1-205ENST00000434651 MAGI1Q96QZ7 1491 aaPredicted RBP25.56■■□□□ 1.68
HLA-DQB1-205ENST00000434651 KIF27Q86VH2 1401 aa25.56■■□□□ 1.68
HLA-DQB1-205ENST00000434651 DNAJC5Q9H3Z4 198 aa25.55■■□□□ 1.68
HLA-DQB1-205ENST00000434651 IGF1RP08069 1367 aa25.53■■□□□ 1.68
HLA-DQB1-205ENST00000434651 OSCARQ8IYS5 282 aa25.52■■□□□ 1.68
HLA-DQB1-205ENST00000434651 CHMP7Q8WUX9 453 aaPredicted RBP25.52■■□□□ 1.68
HLA-DQB1-205ENST00000434651 ERICH3Q5RHP9 1530 aa25.52■■□□□ 1.68
HLA-DQB1-205ENST00000434651 SYNJ2O15056 1496 aa25.5■■□□□ 1.67
HLA-DQB1-205ENST00000434651 ADAMTS12P58397 1594 aa25.5■■□□□ 1.67
HLA-DQB1-205ENST00000434651 FHAD1B1AJZ9 1412 aa25.43■■□□□ 1.66
HLA-DQB1-205ENST00000434651 GRIN2AQ12879 1464 aa25.4■■□□□ 1.66
HLA-DQB1-205ENST00000434651 FAM9AQ8IZU1 332 aaPredicted RBP25.39■■□□□ 1.66
HLA-DQB1-205ENST00000434651 CARMIL1Q5VZK9 1371 aa25.34■■□□□ 1.65
HLA-DQB1-205ENST00000434651 CEP170Q5SW79 1584 aa25.32■■□□□ 1.64
HLA-DQB1-205ENST00000434651 CUL7Q14999 1698 aa25.32■■□□□ 1.64
HLA-DQB1-205ENST00000434651 CLASP1Q7Z460 1538 aa25.28■■□□□ 1.64
HLA-DQB1-205ENST00000434651 NUP160Q12769 1436 aa25.25■■□□□ 1.63
HLA-DQB1-205ENST00000434651 CSRNP3Q8WYN3 585 aa25.23■■□□□ 1.63
HLA-DQB1-205ENST00000434651 RAPGEF2Q9Y4G8 1499 aa25.18■■□□□ 1.62
HLA-DQB1-205ENST00000434651 PRXQ9BXM0 1461 aa25.18■■□□□ 1.62
HLA-DQB1-205ENST00000434651 EHMT2Q96KQ7 1210 aa25.16■■□□□ 1.62
HLA-DQB1-205ENST00000434651 RIMBP3CA6NJZ7 1639 aa25.15■■□□□ 1.62
HLA-DQB1-205ENST00000434651 RIMBP3BA6NNM3 1639 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms