Protein–RNA interactions for Protein: P0DP42

TMEM225B, Transmembrane protein 225B, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM225BP0DP42 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM225BP0DP42 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM225BP0DP42 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM225BP0DP42 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.19□□□□□ -0.3
TMEM225BP0DP42 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM225BP0DP42 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM225BP0DP42 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM225BP0DP42 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM225BP0DP42 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM225BP0DP42 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
TMEM225BP0DP42 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM225BP0DP42 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM225BP0DP42 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.18□□□□□ -0.3
TMEM225BP0DP42 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 RPL13P2-201ENST00000440687 659 ntBASIC13.18□□□□□ -0.3
TMEM225BP0DP42 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 AC074044.1-201ENST00000609673 707 ntBASIC13.18□□□□□ -0.3
TMEM225BP0DP42 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 AL359258.3-201ENST00000622910 2331 ntBASIC13.18□□□□□ -0.3
TMEM225BP0DP42 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 AL121723.1-201ENST00000445194 1519 ntBASIC13.18□□□□□ -0.3
TMEM225BP0DP42 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TMEM225BP0DP42 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM225BP0DP42 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TMEM225BP0DP42 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.17□□□□□ -0.3
TMEM225BP0DP42 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TMEM225BP0DP42 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM225BP0DP42 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.17□□□□□ -0.3
TMEM225BP0DP42 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM225BP0DP42 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM225BP0DP42 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.17□□□□□ -0.3
TMEM225BP0DP42 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM225BP0DP42 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TMEM225BP0DP42 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.17□□□□□ -0.3
TMEM225BP0DP42 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
TMEM225BP0DP42 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM225BP0DP42 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.17□□□□□ -0.3
TMEM225BP0DP42 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TMEM225BP0DP42 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.17□□□□□ -0.3
TMEM225BP0DP42 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM225BP0DP42 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM225BP0DP42 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
TMEM225BP0DP42 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.17□□□□□ -0.3
TMEM225BP0DP42 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.17□□□□□ -0.3
TMEM225BP0DP42 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM225BP0DP42 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM225BP0DP42 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.17□□□□□ -0.3
TMEM225BP0DP42 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.17□□□□□ -0.3
TMEM225BP0DP42 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.17□□□□□ -0.3
TMEM225BP0DP42 CNN2P2-201ENST00000443536 909 ntBASIC13.17□□□□□ -0.3
TMEM225BP0DP42 CNN2P3-201ENST00000450201 906 ntBASIC13.17□□□□□ -0.3
TMEM225BP0DP42 SDHAP3-202ENST00000515467 728 ntBASIC13.17□□□□□ -0.3
TMEM225BP0DP42 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.17□□□□□ -0.3
TMEM225BP0DP42 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.17□□□□□ -0.3
TMEM225BP0DP42 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.17□□□□□ -0.3
TMEM225BP0DP42 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms