Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.27■□□□□ 0.03
RAB3IL1Q8TBN0 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
RAB3IL1Q8TBN0 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
RAB3IL1Q8TBN0 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.03
RAB3IL1Q8TBN0 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB3IL1Q8TBN0 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RAB3IL1Q8TBN0 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.27■□□□□ 0.03
RAB3IL1Q8TBN0 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
RAB3IL1Q8TBN0 AC138969.3-201ENST00000546612 1459 ntBASIC15.27■□□□□ 0.03
RAB3IL1Q8TBN0 AC138932.2-201ENST00000548268 1459 ntBASIC15.27■□□□□ 0.03
RAB3IL1Q8TBN0 AC126755.4-201ENST00000549796 1459 ntBASIC15.27■□□□□ 0.03
RAB3IL1Q8TBN0 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB3IL1Q8TBN0 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
RAB3IL1Q8TBN0 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 C8orf49-201ENST00000525043 1968 ntBASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 AC018529.2-202ENST00000611482 3087 ntBASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3IL1Q8TBN0 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 AC007787.1-201ENST00000588095 1583 ntBASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 AL671277.1-201ENST00000429656 993 ntBASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 KRT8P23-201ENST00000560090 1207 ntBASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 AC152010.1-201ENST00000415779 2006 ntBASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 SON-203ENST00000381679 7860 ntTSL 5 BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms