Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDH17O14917 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDH17O14917 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.61□□□□□ -0.07
PCDH17O14917 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
PCDH17O14917 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDH17O14917 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDH17O14917 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDH17O14917 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH17O14917 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.6□□□□□ -0.07
PCDH17O14917 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.6□□□□□ -0.07
PCDH17O14917 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH17O14917 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.6□□□□□ -0.07
PCDH17O14917 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
PCDH17O14917 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH17O14917 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
PCDH17O14917 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
PCDH17O14917 C1QBPP1-201ENST00000400117 770 ntBASIC14.6□□□□□ -0.07
PCDH17O14917 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.6□□□□□ -0.07
PCDH17O14917 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.6□□□□□ -0.07
PCDH17O14917 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.6□□□□□ -0.07
PCDH17O14917 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH17O14917 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.6□□□□□ -0.07
PCDH17O14917 AC026410.3-201ENST00000514280 936 ntBASIC14.6□□□□□ -0.07
PCDH17O14917 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
PCDH17O14917 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.6□□□□□ -0.07
PCDH17O14917 AC124283.3-201ENST00000570869 594 ntBASIC14.6□□□□□ -0.07
PCDH17O14917 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
PCDH17O14917 MIR6805-201ENST00000615055 62 ntBASIC14.6□□□□□ -0.07
PCDH17O14917 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH17O14917 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.6□□□□□ -0.07
PCDH17O14917 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.6□□□□□ -0.07
PCDH17O14917 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH17O14917 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
PCDH17O14917 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH17O14917 AC013726.1-201ENST00000563747 2285 ntBASIC14.6□□□□□ -0.07
PCDH17O14917 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH17O14917 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.6□□□□□ -0.07
PCDH17O14917 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH17O14917 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH17O14917 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH17O14917 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH17O14917 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
PCDH17O14917 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.6□□□□□ -0.07
PCDH17O14917 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH17O14917 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH17O14917 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDH17O14917 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDH17O14917 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.59□□□□□ -0.07
PCDH17O14917 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.59□□□□□ -0.07
PCDH17O14917 AC007292.2-201ENST00000593524 1812 ntBASIC14.59□□□□□ -0.07
PCDH17O14917 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.59□□□□□ -0.07
PCDH17O14917 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.59□□□□□ -0.07
PCDH17O14917 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDH17O14917 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDH17O14917 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.59□□□□□ -0.07
PCDH17O14917 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDH17O14917 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDH17O14917 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDH17O14917 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
PCDH17O14917 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.59□□□□□ -0.07
PCDH17O14917 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDH17O14917 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDH17O14917 ACKR1-201ENST00000368121 1240 ntBASIC14.59□□□□□ -0.07
PCDH17O14917 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.59□□□□□ -0.07
PCDH17O14917 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.59□□□□□ -0.07
PCDH17O14917 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.59□□□□□ -0.07
PCDH17O14917 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
PCDH17O14917 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.59□□□□□ -0.07
PCDH17O14917 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.59□□□□□ -0.07
PCDH17O14917 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.59□□□□□ -0.07
PCDH17O14917 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.59□□□□□ -0.07
PCDH17O14917 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.59□□□□□ -0.07
PCDH17O14917 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDH17O14917 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.59□□□□□ -0.07
PCDH17O14917 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.59□□□□□ -0.07
PCDH17O14917 KRT17P8-201ENST00000540749 863 ntBASIC14.59□□□□□ -0.07
PCDH17O14917 RAB43P1-201ENST00000561790 589 ntBASIC14.59□□□□□ -0.07
PCDH17O14917 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.59□□□□□ -0.07
PCDH17O14917 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.59□□□□□ -0.07
PCDH17O14917 AC010319.3-201ENST00000597028 470 ntBASIC14.59□□□□□ -0.07
PCDH17O14917 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.59□□□□□ -0.07
PCDH17O14917 AC023024.2-201ENST00000623561 1993 ntBASIC14.59□□□□□ -0.07
PCDH17O14917 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PCDH17O14917 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDH17O14917 AC148477.4-201ENST00000613430 1793 ntBASIC14.59□□□□□ -0.07
PCDH17O14917 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.59□□□□□ -0.07
PCDH17O14917 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
PCDH17O14917 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDH17O14917 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PCDH17O14917 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PCDH17O14917 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDH17O14917 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDH17O14917 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.59□□□□□ -0.07
PCDH17O14917 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.59□□□□□ -0.07
PCDH17O14917 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PCDH17O14917 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDH17O14917 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
PCDH17O14917 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PCDH17O14917 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.58□□□□□ -0.07
PCDH17O14917 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms