Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 TOP3BP1-201ENST00000420768 1380 ntBASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 HCG4-201ENST00000418983 998 ntBASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 AP005018.1-201ENST00000525475 301 ntBASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 AC109635.5-201ENST00000533593 962 ntBASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 MPDU1-223ENST00000582151 728 ntBASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 AC008267.7-201ENST00000624570 1194 ntBASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXR1Q6PIV2 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXR1Q6PIV2 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
FOXR1Q6PIV2 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
FOXR1Q6PIV2 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
FOXR1Q6PIV2 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXR1Q6PIV2 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
FOXR1Q6PIV2 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16■□□□□ 0.15
FOXR1Q6PIV2 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC16■□□□□ 0.15
FOXR1Q6PIV2 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXR1Q6PIV2 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
FOXR1Q6PIV2 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC16■□□□□ 0.15
FOXR1Q6PIV2 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
FOXR1Q6PIV2 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC16■□□□□ 0.15
FOXR1Q6PIV2 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXR1Q6PIV2 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
FOXR1Q6PIV2 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC16■□□□□ 0.15
FOXR1Q6PIV2 SLC6A6P1-201ENST00000413933 1850 ntBASIC16■□□□□ 0.15
FOXR1Q6PIV2 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16■□□□□ 0.15
FOXR1Q6PIV2 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
FOXR1Q6PIV2 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXR1Q6PIV2 CD81-202ENST00000381036 880 ntTSL 3 BASIC16■□□□□ 0.15
FOXR1Q6PIV2 RNU1-129P-201ENST00000384064 167 ntBASIC16■□□□□ 0.15
FOXR1Q6PIV2 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
FOXR1Q6PIV2 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16■□□□□ 0.15
FOXR1Q6PIV2 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16■□□□□ 0.15
FOXR1Q6PIV2 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16■□□□□ 0.15
FOXR1Q6PIV2 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16■□□□□ 0.15
FOXR1Q6PIV2 U1.21-201ENST00000580816 167 ntBASIC16■□□□□ 0.15
FOXR1Q6PIV2 AP001350.2-201ENST00000625104 1094 ntBASIC16■□□□□ 0.15
FOXR1Q6PIV2 AC012183.1-201ENST00000625197 499 ntBASIC16■□□□□ 0.15
FOXR1Q6PIV2 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC16■□□□□ 0.15
FOXR1Q6PIV2 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXR1Q6PIV2 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
FOXR1Q6PIV2 SLC9A7P1-202ENST00000556476 2239 ntBASIC16■□□□□ 0.15
FOXR1Q6PIV2 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXR1Q6PIV2 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC16■□□□□ 0.15
FOXR1Q6PIV2 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC16■□□□□ 0.15
FOXR1Q6PIV2 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
FOXR1Q6PIV2 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC16■□□□□ 0.15
FOXR1Q6PIV2 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
FOXR1Q6PIV2 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
FOXR1Q6PIV2 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16■□□□□ 0.15
FOXR1Q6PIV2 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
FOXR1Q6PIV2 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16■□□□□ 0.15
FOXR1Q6PIV2 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
FOXR1Q6PIV2 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
FOXR1Q6PIV2 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXR1Q6PIV2 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
FOXR1Q6PIV2 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
FOXR1Q6PIV2 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXR1Q6PIV2 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXR1Q6PIV2 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXR1Q6PIV2 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
FOXR1Q6PIV2 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXR1Q6PIV2 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.99■□□□□ 0.15
FOXR1Q6PIV2 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.99■□□□□ 0.15
FOXR1Q6PIV2 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXR1Q6PIV2 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
FOXR1Q6PIV2 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
FOXR1Q6PIV2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
FOXR1Q6PIV2 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms