RNA–Protein interactions for RNA: ENST00000421801.6

GABARAPL1-202, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 2 BASIC

Gene GABARAPL1, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-202ENST00000421801 NISCHQ9Y2I1 1504 aa39.83■■■■□ 3.97
GABARAPL1-202ENST00000421801 CCDC180Q9P1Z9 1646 aa35.75■■■■□ 3.31
GABARAPL1-202ENST00000421801 ABCC9O60706 1549 aa35.63■■■■□ 3.29
GABARAPL1-202ENST00000421801 RB1CC1Q8TDY2 1594 aa33.94■■■■□ 3.02
GABARAPL1-202ENST00000421801 NACADO15069 1562 aa33.72■■■□□ 2.99
GABARAPL1-202ENST00000421801 DCAF8L2P0C7V8 631 aa33.54■■■□□ 2.96
GABARAPL1-202ENST00000421801 UNC13AQ9UPW8 1703 aa33.31■■■□□ 2.92
GABARAPL1-202ENST00000421801 DNAJC5BQ9UF47 199 aa33.29■■■□□ 2.92
GABARAPL1-202ENST00000421801 MYO15BQ96JP2 1530 aa33.24■■■□□ 2.91
GABARAPL1-202ENST00000421801 PABPN1Q86U42 306 aaKnown RBP eCLIP33.15■■■□□ 2.9
GABARAPL1-202ENST00000421801 ZCCHC6Q5VYS8 1495 aaKnown RBP33.05■■■□□ 2.88
GABARAPL1-202ENST00000421801 BICRAQ9NZM4 1560 aa32.99■■■□□ 2.87
GABARAPL1-202ENST00000421801 DCAF1Q9Y4B6 1507 aa32.88■■■□□ 2.85
GABARAPL1-202ENST00000421801 SCRIBQ14160 1630 aa32.62■■■□□ 2.81
GABARAPL1-202ENST00000421801 SHROOM4Q9ULL8 1493 aa32.47■■■□□ 2.79
GABARAPL1-202ENST00000421801 CC2D2AQ9P2K1 1620 aa32.21■■■□□ 2.75
GABARAPL1-202ENST00000421801 EIF4G1Q04637 1599 aaKnown RBP32.15■■■□□ 2.74
GABARAPL1-202ENST00000421801 CECR2Q9BXF3 1484 aa32.05■■■□□ 2.72
GABARAPL1-202ENST00000421801 SMARCA4P51532 1647 aa31.1■■■□□ 2.57
GABARAPL1-202ENST00000421801 NCAPD3P42695 1498 aa31.09■■■□□ 2.57
GABARAPL1-202ENST00000421801 ATAD2BQ9ULI0 1458 aa31.04■■■□□ 2.56
GABARAPL1-202ENST00000421801 SMARCA2P51531 1590 aa30.96■■■□□ 2.55
GABARAPL1-202ENST00000421801 HMGXB3Q12766 1538 aa30.92■■■□□ 2.54
GABARAPL1-202ENST00000421801 BAZ1AQ9NRL2 1556 aaPredicted RBP30.92■■■□□ 2.54
GABARAPL1-202ENST00000421801 BAZ1BQ9UIG0 1483 aaKnown RBP30.76■■■□□ 2.52
GABARAPL1-202ENST00000421801 PEG3Q9GZU2 1588 aa30.76■■■□□ 2.52
GABARAPL1-202ENST00000421801 ERCC6Q03468 1493 aa30.73■■■□□ 2.51
GABARAPL1-202ENST00000421801 MROH2BQ7Z745 1585 aa30.72■■■□□ 2.51
GABARAPL1-202ENST00000421801 NESP48681 1621 aa30.65■■■□□ 2.5
GABARAPL1-202ENST00000421801 CUX2O14529 1486 aa30.62■■■□□ 2.49
GABARAPL1-202ENST00000421801 DNAJC5Q9H3Z4 198 aa30.44■■■□□ 2.46
GABARAPL1-202ENST00000421801 LAMC3Q9Y6N6 1575 aa30.43■■■□□ 2.46
GABARAPL1-202ENST00000421801 WIZO95785 1651 aa30.41■■■□□ 2.46
GABARAPL1-202ENST00000421801 THOC2Q8NI27 1593 aaKnown RBP30.35■■■□□ 2.45
GABARAPL1-202ENST00000421801 KIF21AQ7Z4S6 1674 aa30.33■■■□□ 2.45
GABARAPL1-202ENST00000421801 PDS5BQ9NTI5 1447 aa30.19■■■□□ 2.42
GABARAPL1-202ENST00000421801 CADPSQ9ULU8 1353 aa30.15■■■□□ 2.42
GABARAPL1-202ENST00000421801 RSF1Q96T23 1441 aaPredicted RBP30.08■■■□□ 2.41
GABARAPL1-202ENST00000421801 TOP2AP11388 1531 aaKnown RBP29.98■■■□□ 2.39
GABARAPL1-202ENST00000421801 MRC2Q9UBG0 1479 aa29.97■■■□□ 2.39
GABARAPL1-202ENST00000421801 WDR62O43379 1518 aa29.91■■■□□ 2.38
GABARAPL1-202ENST00000421801 CEP164Q9UPV0 1460 aa29.88■■■□□ 2.37
GABARAPL1-202ENST00000421801 FANCD2Q9BXW9 1451 aa29.86■■■□□ 2.37
GABARAPL1-202ENST00000421801 CFTRP13569 1480 aa29.85■■■□□ 2.37
GABARAPL1-202ENST00000421801 PRDM2Q13029 1718 aa29.71■■■□□ 2.35
GABARAPL1-202ENST00000421801 URB2Q14146 1524 aaKnown RBP29.63■■■□□ 2.33
GABARAPL1-202ENST00000421801 CCDC88BA6NC98 1476 aa29.62■■■□□ 2.33
GABARAPL1-202ENST00000421801 TOPBP1Q92547 1522 aa29.31■■■□□ 2.28
GABARAPL1-202ENST00000421801 IFT140Q96RY7 1462 aa29.25■■■□□ 2.27
GABARAPL1-202ENST00000421801 ZNF608Q9ULD9 1512 aaPredicted RBP29.25■■■□□ 2.27
GABARAPL1-202ENST00000421801 DNMBPQ6XZF7 1577 aa29.22■■■□□ 2.27
GABARAPL1-202ENST00000421801 TRIM41Q8WV44 630 aa29.21■■■□□ 2.27
GABARAPL1-202ENST00000421801 ABCC8Q09428 1581 aa29.19■■■□□ 2.26
GABARAPL1-202ENST00000421801 OSCARQ8IYS5 282 aa29.18■■■□□ 2.26
GABARAPL1-202ENST00000421801 EIF4G3O43432 1585 aaKnown RBP29.13■■■□□ 2.25
GABARAPL1-202ENST00000421801 TARBP1Q13395 1621 aaKnown RBP29.08■■■□□ 2.25
GABARAPL1-202ENST00000421801 POLA1P09884 1462 aaPredicted RBP29.02■■■□□ 2.24
GABARAPL1-202ENST00000421801 AQRO60306 1485 aaKnown RBP eCLIP28.97■■■□□ 2.23
GABARAPL1-202ENST00000421801 CHD1O14646 1710 aa28.94■■■□□ 2.22
GABARAPL1-202ENST00000421801 RIMBP3CA6NJZ7 1639 aa28.93■■■□□ 2.22
GABARAPL1-202ENST00000421801 RIMBP3BA6NNM3 1639 aa28.93■■■□□ 2.22
GABARAPL1-202ENST00000421801 RIMBP3Q9UFD9 1639 aa28.93■■■□□ 2.22
GABARAPL1-202ENST00000421801 RAD54L2Q9Y4B4 1467 aa28.91■■■□□ 2.22
GABARAPL1-202ENST00000421801 CUX1P39880 1505 aa28.87■■■□□ 2.21
GABARAPL1-202ENST00000421801 FGD5Q6ZNL6 1462 aa28.86■■■□□ 2.21
GABARAPL1-202ENST00000421801 SOGA1O94964 1423 aa28.85■■■□□ 2.21
GABARAPL1-202ENST00000421801 SUPT5HO00267 1087 aaKnown RBP28.83■■■□□ 2.21
GABARAPL1-202ENST00000421801 ARHGEF11O15085 1522 aa28.81■■■□□ 2.2
GABARAPL1-202ENST00000421801 TDRD9Q8NDG6 1382 aaKnown RBP28.79■■■□□ 2.2
GABARAPL1-202ENST00000421801 WDR97A6NE52 1622 aa28.74■■■□□ 2.19
GABARAPL1-202ENST00000421801 FBLN2P98095 1184 aa28.73■■■□□ 2.19
GABARAPL1-202ENST00000421801 SNAPC4Q5SXM2 1469 aa28.7■■■□□ 2.18
GABARAPL1-202ENST00000421801 PBRM1Q86U86 1689 aa28.61■■■□□ 2.17
GABARAPL1-202ENST00000421801 GRIN2BQ13224 1484 aa28.59■■■□□ 2.17
GABARAPL1-202ENST00000421801 MAGI1Q96QZ7 1491 aaPredicted RBP28.59■■■□□ 2.17
GABARAPL1-202ENST00000421801 CLASP1Q7Z460 1538 aa28.53■■■□□ 2.16
GABARAPL1-202ENST00000421801 ARAP1Q96P48 1450 aa28.53■■■□□ 2.16
GABARAPL1-202ENST00000421801 CYB5RLQ6IPT4 315 aa28.53■■■□□ 2.16
GABARAPL1-202ENST00000421801 ABCA5Q8WWZ7 1642 aa28.52■■■□□ 2.16
GABARAPL1-202ENST00000421801 GAPVD1Q14C86 1478 aa28.52■■■□□ 2.16
GABARAPL1-202ENST00000421801 CHMP7Q8WUX9 453 aaPredicted RBP28.51■■■□□ 2.15
GABARAPL1-202ENST00000421801 ABCA10Q8WWZ4 1543 aa28.51■■■□□ 2.15
GABARAPL1-202ENST00000421801 SYNJ1O43426 1573 aa28.5■■■□□ 2.15
GABARAPL1-202ENST00000421801 SYNJ2O15056 1496 aa28.5■■■□□ 2.15
GABARAPL1-202ENST00000421801 BIVM-ERCC5R4GMW8 1640 aa28.46■■■□□ 2.15
GABARAPL1-202ENST00000421801 TOP2BQ02880 1626 aa28.43■■■□□ 2.14
GABARAPL1-202ENST00000421801 WRNQ14191 1432 aaPredicted RBP eCLIP28.39■■■□□ 2.14
GABARAPL1-202ENST00000421801 ADAMTS12P58397 1594 aa28.29■■■□□ 2.12
GABARAPL1-202ENST00000421801 GRIN2AQ12879 1464 aa28.25■■■□□ 2.11
GABARAPL1-202ENST00000421801 CEP170Q5SW79 1584 aa28.2■■■□□ 2.1
GABARAPL1-202ENST00000421801 TRHP20396 242 aaPredicted RBP28.18■■■□□ 2.1
GABARAPL1-202ENST00000421801 ERICH3Q5RHP9 1530 aa28.16■■■□□ 2.1
GABARAPL1-202ENST00000421801 FHAD1B1AJZ9 1412 aa28.14■■■□□ 2.1
GABARAPL1-202ENST00000421801 ERCC6L2Q5T890 1561 aa28.13■■■□□ 2.09
GABARAPL1-202ENST00000421801 NUP160Q12769 1436 aa28.13■■■□□ 2.09
GABARAPL1-202ENST00000421801 SHROOM2Q13796 1616 aa28.06■■■□□ 2.08
GABARAPL1-202ENST00000421801 RUSC2Q8N2Y8 1516 aa27.91■■■□□ 2.06
GABARAPL1-202ENST00000421801 PRG4Q92954 1404 aaPredicted RBP27.86■■■□□ 2.05
GABARAPL1-202ENST00000421801 CUL7Q14999 1698 aa27.82■■■□□ 2.04
GABARAPL1-202ENST00000421801 KIF27Q86VH2 1401 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms