RNA–Protein interactions for RNA: ENST00000422728.2

FAM200B-201, Transcript of family with sequence similarity 200 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM200B, Length 2,962 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM200B-201ENST00000422728 NISCHQ9Y2I1 1504 aa28.92■■■□□ 2.22
FAM200B-201ENST00000422728 CCDC180Q9P1Z9 1646 aa24.96■■□□□ 1.59
FAM200B-201ENST00000422728 SHROOM4Q9ULL8 1493 aa24.7■■□□□ 1.54
FAM200B-201ENST00000422728 ZCCHC6Q5VYS8 1495 aaKnown RBP24.56■■□□□ 1.52
FAM200B-201ENST00000422728 SUPT5HO00267 1087 aaKnown RBP24.35■■□□□ 1.49
FAM200B-201ENST00000422728 DCAF1Q9Y4B6 1507 aa24.09■■□□□ 1.45
FAM200B-201ENST00000422728 MYO15BQ96JP2 1530 aa23.83■■□□□ 1.41
FAM200B-201ENST00000422728 CHIC1Q5VXU3 224 aa23.71■■□□□ 1.39
FAM200B-201ENST00000422728 DCAF8L2P0C7V8 631 aa23.65■■□□□ 1.38
FAM200B-201ENST00000422728 HRCP23327 699 aa23.58■■□□□ 1.36
FAM200B-201ENST00000422728 PCGF6Q9BYE7 350 aa23.47■■□□□ 1.35
FAM200B-201ENST00000422728 PPARGC1BQ86YN6 1023 aaKnown RBP23.31■■□□□ 1.32
FAM200B-201ENST00000422728 ABCC9O60706 1549 aa23.23■■□□□ 1.31
FAM200B-201ENST00000422728 LOC105371045A0A1W2PR82 267 aa23.2■■□□□ 1.3
FAM200B-201ENST00000422728 NACADO15069 1562 aa22.89■■□□□ 1.25
FAM200B-201ENST00000422728 SCRIBQ14160 1630 aa22.84■■□□□ 1.25
FAM200B-201ENST00000422728 RSF1Q96T23 1441 aaPredicted RBP22.74■■□□□ 1.23
FAM200B-201ENST00000422728 TRIM26Q12899 539 aaPredicted RBP22.73■■□□□ 1.23
FAM200B-201ENST00000422728 RB1CC1Q8TDY2 1594 aa22.7■■□□□ 1.22
FAM200B-201ENST00000422728 FAM9AQ8IZU1 332 aaPredicted RBP22.55■■□□□ 1.2
FAM200B-201ENST00000422728 EHMT2Q96KQ7 1210 aa22.53■■□□□ 1.2
FAM200B-201ENST00000422728 TRIM41Q8WV44 630 aa22.5■■□□□ 1.19
FAM200B-201ENST00000422728 BAZ1AQ9NRL2 1556 aaPredicted RBP22.36■■□□□ 1.17
FAM200B-201ENST00000422728 MROH2BQ7Z745 1585 aa22.33■■□□□ 1.17
FAM200B-201ENST00000422728 EIF4G1Q04637 1599 aaKnown RBP22.3■■□□□ 1.16
FAM200B-201ENST00000422728 CECR2Q9BXF3 1484 aa22.28■■□□□ 1.16
FAM200B-201ENST00000422728 WIZO95785 1651 aa22.24■■□□□ 1.15
FAM200B-201ENST00000422728 ZEB1P37275 1124 aaPredicted RBP22.23■■□□□ 1.15
FAM200B-201ENST00000422728 UNC13AQ9UPW8 1703 aa22.18■■□□□ 1.14
FAM200B-201ENST00000422728 TOP2AP11388 1531 aaKnown RBP22.09■■□□□ 1.13
FAM200B-201ENST00000422728 SCAF1Q9H7N4 1312 aaKnown RBP22.08■■□□□ 1.13
FAM200B-201ENST00000422728 SMARCA4P51532 1647 aa22.08■■□□□ 1.12
FAM200B-201ENST00000422728 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.97■■□□□ 1.11
FAM200B-201ENST00000422728 SMARCA2P51531 1590 aa21.91■■□□□ 1.1
FAM200B-201ENST00000422728 PEG3Q9GZU2 1588 aa21.89■■□□□ 1.09
FAM200B-201ENST00000422728 TTBK1Q5TCY1 1321 aaPredicted RBP21.86■■□□□ 1.09
FAM200B-201ENST00000422728 CCER1Q8TC90 406 aaPredicted RBP21.82■■□□□ 1.08
FAM200B-201ENST00000422728 BICRAQ9NZM4 1560 aa21.8■■□□□ 1.08
FAM200B-201ENST00000422728 CCDC88BA6NC98 1476 aa21.76■■□□□ 1.07
FAM200B-201ENST00000422728 ABCC8Q09428 1581 aa21.7■■□□□ 1.06
FAM200B-201ENST00000422728 NEUROD1Q13562 356 aa21.69■■□□□ 1.06
FAM200B-201ENST00000422728 PELP1Q8IZL8 1130 aaKnown RBP21.67■■□□□ 1.06
FAM200B-201ENST00000422728 EEA1Q15075 1411 aa21.63■■□□□ 1.05
FAM200B-201ENST00000422728 ACIN1Q9UKV3 1341 aaKnown RBP21.62■■□□□ 1.05
FAM200B-201ENST00000422728 WRNQ14191 1432 aaPredicted RBP eCLIP21.6■■□□□ 1.05
FAM200B-201ENST00000422728 DIEXFQ68CQ4 756 aaKnown RBP21.58■■□□□ 1.05
FAM200B-201ENST00000422728 SOGA1O94964 1423 aa21.55■■□□□ 1.04
FAM200B-201ENST00000422728 CEP162Q5TB80 1403 aa21.54■■□□□ 1.04
FAM200B-201ENST00000422728 RUSC2Q8N2Y8 1516 aa21.48■■□□□ 1.03
FAM200B-201ENST00000422728 GTF3C3Q9Y5Q9 886 aa21.48■■□□□ 1.03
FAM200B-201ENST00000422728 TNIKQ9UKE5 1360 aa21.43■■□□□ 1.02
FAM200B-201ENST00000422728 UBTFP17480 764 aaKnown RBP21.42■■□□□ 1.02
FAM200B-201ENST00000422728 KIF21BO75037 1637 aa21.41■■□□□ 1.02
FAM200B-201ENST00000422728 ATAD2BQ9ULI0 1458 aa21.37■■□□□ 1.01
FAM200B-201ENST00000422728 CSRNP3Q8WYN3 585 aa21.36■■□□□ 1.01
FAM200B-201ENST00000422728 CENPBP07199 599 aaPredicted RBP21.33■■□□□ 1.01
FAM200B-201ENST00000422728 SYNJ1O43426 1573 aa21.32■■□□□ 1
FAM200B-201ENST00000422728 GOLGA3Q08378 1498 aa21.32■■□□□ 1
FAM200B-201ENST00000422728 YTHDC1Q96MU7 727 aaKnown RBP21.27■■□□□ 1
FAM200B-201ENST00000422728 BAZ1BQ9UIG0 1483 aaKnown RBP21.26■□□□□ 0.99
FAM200B-201ENST00000422728 ZNF316A6NFI3 1004 aaPredicted RBP21.26■□□□□ 0.99
FAM200B-201ENST00000422728 BIVM-ERCC5R4GMW8 1640 aa21.26■□□□□ 0.99
FAM200B-201ENST00000422728 HNRNPUL2Q1KMD3 747 aaKnown RBP21.25■□□□□ 0.99
FAM200B-201ENST00000422728 CEP164Q9UPV0 1460 aa21.22■□□□□ 0.99
FAM200B-201ENST00000422728 HMGXB3Q12766 1538 aa21.22■□□□□ 0.99
FAM200B-201ENST00000422728 TOP2BQ02880 1626 aa21.21■□□□□ 0.99
FAM200B-201ENST00000422728 PABPN1Q86U42 306 aaKnown RBP eCLIP21.18■□□□□ 0.98
FAM200B-201ENST00000422728 MIER1Q8N108 512 aa21.14■□□□□ 0.97
FAM200B-201ENST00000422728 RANGAP1P46060 587 aaPredicted RBP21.13■□□□□ 0.97
FAM200B-201ENST00000422728 PRDM2Q13029 1718 aa21.08■□□□□ 0.97
FAM200B-201ENST00000422728 ERICH3Q5RHP9 1530 aa21.06■□□□□ 0.96
FAM200B-201ENST00000422728 NCAPD3P42695 1498 aa21.06■□□□□ 0.96
FAM200B-201ENST00000422728 CLIP1P30622 1438 aa21.04■□□□□ 0.96
FAM200B-201ENST00000422728 RAPGEF2Q9Y4G8 1499 aa20.97■□□□□ 0.95
FAM200B-201ENST00000422728 VPS8Q8N3P4 1428 aa20.96■□□□□ 0.95
FAM200B-201ENST00000422728 PRXQ9BXM0 1461 aa20.91■□□□□ 0.94
FAM200B-201ENST00000422728 APLP2Q06481 763 aa20.9■□□□□ 0.94
FAM200B-201ENST00000422728 CFTRP13569 1480 aa20.86■□□□□ 0.93
FAM200B-201ENST00000422728 CUX1P39880 1505 aa20.85■□□□□ 0.93
FAM200B-201ENST00000422728 KANK4Q5T7N3 995 aaPredicted RBP20.76■□□□□ 0.91
FAM200B-201ENST00000422728 DHX57Q6P158 1386 aaKnown RBP20.74■□□□□ 0.91
FAM200B-201ENST00000422728 ARAP1Q96P48 1450 aa20.73■□□□□ 0.91
FAM200B-201ENST00000422728 KIF27Q86VH2 1401 aa20.68■□□□□ 0.9
FAM200B-201ENST00000422728 MAP3K1Q13233 1512 aa20.6■□□□□ 0.89
FAM200B-201ENST00000422728 ITGAEP38570 1179 aa20.6■□□□□ 0.89
FAM200B-201ENST00000422728 CUX2O14529 1486 aa20.59■□□□□ 0.89
FAM200B-201ENST00000422728 RRBP1Q9P2E9 1410 aaKnown RBP20.56■□□□□ 0.88
FAM200B-201ENST00000422728 SUPT16HQ9Y5B9 1047 aaKnown RBP20.56■□□□□ 0.88
FAM200B-201ENST00000422728 CLSPNQ9HAW4 1339 aa20.56■□□□□ 0.88
FAM200B-201ENST00000422728 MYT1Q01538 1121 aa20.55■□□□□ 0.88
FAM200B-201ENST00000422728 KCNH8Q96L42 1107 aa20.52■□□□□ 0.87
FAM200B-201ENST00000422728 ARHGAP35Q9NRY4 1499 aa20.51■□□□□ 0.87
FAM200B-201ENST00000422728 CADPSQ9ULU8 1353 aa20.48■□□□□ 0.87
FAM200B-201ENST00000422728 CFAP43Q8NDM7 1665 aa20.45■□□□□ 0.86
FAM200B-201ENST00000422728 CCNB3Q8WWL7 1395 aa20.44■□□□□ 0.86
FAM200B-201ENST00000422728 TIAM1Q13009 1591 aa20.41■□□□□ 0.86
FAM200B-201ENST00000422728 CC2D2AQ9P2K1 1620 aa20.41■□□□□ 0.86
FAM200B-201ENST00000422728 DNMBPQ6XZF7 1577 aa20.41■□□□□ 0.86
FAM200B-201ENST00000422728 FGD5Q6ZNL6 1462 aa20.4■□□□□ 0.86
FAM200B-201ENST00000422728 IGF1RP08069 1367 aa20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms