RNA–Protein interactions for RNA: ENST00000413933.1

SLC6A6P1-201, Transcript of solute carrier family 6 member 6 pseudogene 1, humanhuman

BASIC

Gene SLC6A6P1, Length 1,850 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6P1-201ENST00000413933 NISCHQ9Y2I1 1504 aa30.62■■■□□ 2.49
SLC6A6P1-201ENST00000413933 CCDC180Q9P1Z9 1646 aa26.89■■□□□ 1.89
SLC6A6P1-201ENST00000413933 ABCC9O60706 1549 aa25.73■■□□□ 1.71
SLC6A6P1-201ENST00000413933 ZCCHC6Q5VYS8 1495 aaKnown RBP25.65■■□□□ 1.7
SLC6A6P1-201ENST00000413933 DCAF8L2P0C7V8 631 aa25.36■■□□□ 1.65
SLC6A6P1-201ENST00000413933 DCAF1Q9Y4B6 1507 aa25.31■■□□□ 1.64
SLC6A6P1-201ENST00000413933 MYO15BQ96JP2 1530 aa25.15■■□□□ 1.62
SLC6A6P1-201ENST00000413933 NACADO15069 1562 aa25.11■■□□□ 1.61
SLC6A6P1-201ENST00000413933 RB1CC1Q8TDY2 1594 aa24.98■■□□□ 1.59
SLC6A6P1-201ENST00000413933 SHROOM4Q9ULL8 1493 aa24.69■■□□□ 1.54
SLC6A6P1-201ENST00000413933 SCRIBQ14160 1630 aa24.66■■□□□ 1.54
SLC6A6P1-201ENST00000413933 UNC13AQ9UPW8 1703 aa24.53■■□□□ 1.52
SLC6A6P1-201ENST00000413933 BICRAQ9NZM4 1560 aa24.26■■□□□ 1.47
SLC6A6P1-201ENST00000413933 PABPN1Q86U42 306 aaKnown RBP eCLIP24.18■■□□□ 1.46
SLC6A6P1-201ENST00000413933 CECR2Q9BXF3 1484 aa23.82■■□□□ 1.4
SLC6A6P1-201ENST00000413933 BAZ1AQ9NRL2 1556 aaPredicted RBP23.67■■□□□ 1.38
SLC6A6P1-201ENST00000413933 HRCP23327 699 aa23.65■■□□□ 1.38
SLC6A6P1-201ENST00000413933 MROH2BQ7Z745 1585 aa23.64■■□□□ 1.38
SLC6A6P1-201ENST00000413933 SMARCA4P51532 1647 aa23.62■■□□□ 1.37
SLC6A6P1-201ENST00000413933 RSF1Q96T23 1441 aaPredicted RBP23.59■■□□□ 1.37
SLC6A6P1-201ENST00000413933 SUPT5HO00267 1087 aaKnown RBP23.56■■□□□ 1.36
SLC6A6P1-201ENST00000413933 EIF4G1Q04637 1599 aaKnown RBP23.55■■□□□ 1.36
SLC6A6P1-201ENST00000413933 WIZO95785 1651 aa23.45■■□□□ 1.34
SLC6A6P1-201ENST00000413933 PEG3Q9GZU2 1588 aa23.35■■□□□ 1.33
SLC6A6P1-201ENST00000413933 ATAD2BQ9ULI0 1458 aa23.31■■□□□ 1.32
SLC6A6P1-201ENST00000413933 CC2D2AQ9P2K1 1620 aa23.3■■□□□ 1.32
SLC6A6P1-201ENST00000413933 SMARCA2P51531 1590 aa23.29■■□□□ 1.32
SLC6A6P1-201ENST00000413933 PELP1Q8IZL8 1130 aaKnown RBP23.17■■□□□ 1.3
SLC6A6P1-201ENST00000413933 TOP2AP11388 1531 aaKnown RBP23.17■■□□□ 1.3
SLC6A6P1-201ENST00000413933 NCAPD3P42695 1498 aa23.17■■□□□ 1.3
SLC6A6P1-201ENST00000413933 BAZ1BQ9UIG0 1483 aaKnown RBP23.15■■□□□ 1.3
SLC6A6P1-201ENST00000413933 HMGXB3Q12766 1538 aa23.11■■□□□ 1.29
SLC6A6P1-201ENST00000413933 DNAJC5BQ9UF47 199 aa23.03■■□□□ 1.28
SLC6A6P1-201ENST00000413933 CCDC88BA6NC98 1476 aa22.92■■□□□ 1.26
SLC6A6P1-201ENST00000413933 PCGF6Q9BYE7 350 aa22.92■■□□□ 1.26
SLC6A6P1-201ENST00000413933 CHIC1Q5VXU3 224 aa22.89■■□□□ 1.25
SLC6A6P1-201ENST00000413933 PPARGC1BQ86YN6 1023 aaKnown RBP22.75■■□□□ 1.23
SLC6A6P1-201ENST00000413933 CFTRP13569 1480 aa22.56■■□□□ 1.2
SLC6A6P1-201ENST00000413933 CADPSQ9ULU8 1353 aa22.54■■□□□ 1.2
SLC6A6P1-201ENST00000413933 ZEB1P37275 1124 aaPredicted RBP22.53■■□□□ 1.2
SLC6A6P1-201ENST00000413933 NESP48681 1621 aa22.49■■□□□ 1.19
SLC6A6P1-201ENST00000413933 TRIM26Q12899 539 aaPredicted RBP22.49■■□□□ 1.19
SLC6A6P1-201ENST00000413933 PRDM2Q13029 1718 aa22.47■■□□□ 1.19
SLC6A6P1-201ENST00000413933 LAMC3Q9Y6N6 1575 aa22.45■■□□□ 1.19
SLC6A6P1-201ENST00000413933 MYT1Q01538 1121 aa22.43■■□□□ 1.18
SLC6A6P1-201ENST00000413933 ABCC8Q09428 1581 aa22.34■■□□□ 1.17
SLC6A6P1-201ENST00000413933 FANCD2Q9BXW9 1451 aa22.3■■□□□ 1.16
SLC6A6P1-201ENST00000413933 PDS5BQ9NTI5 1447 aa22.26■■□□□ 1.15
SLC6A6P1-201ENST00000413933 KIF21AQ7Z4S6 1674 aa22.24■■□□□ 1.15
SLC6A6P1-201ENST00000413933 WRNQ14191 1432 aaPredicted RBP eCLIP22.22■■□□□ 1.15
SLC6A6P1-201ENST00000413933 SCAF1Q9H7N4 1312 aaKnown RBP22.2■■□□□ 1.14
SLC6A6P1-201ENST00000413933 CEP164Q9UPV0 1460 aa22.2■■□□□ 1.14
SLC6A6P1-201ENST00000413933 TRIM41Q8WV44 630 aa22.17■■□□□ 1.14
SLC6A6P1-201ENST00000413933 SYNJ1O43426 1573 aa22.17■■□□□ 1.14
SLC6A6P1-201ENST00000413933 CUX1P39880 1505 aa22.13■■□□□ 1.13
SLC6A6P1-201ENST00000413933 TOP2BQ02880 1626 aa22.1■■□□□ 1.13
SLC6A6P1-201ENST00000413933 BIVM-ERCC5R4GMW8 1640 aa22.09■■□□□ 1.13
SLC6A6P1-201ENST00000413933 LOC105371045A0A1W2PR82 267 aa22.09■■□□□ 1.13
SLC6A6P1-201ENST00000413933 ERCC6Q03468 1493 aa22.08■■□□□ 1.13
SLC6A6P1-201ENST00000413933 URB2Q14146 1524 aaKnown RBP22.05■■□□□ 1.12
SLC6A6P1-201ENST00000413933 DNMBPQ6XZF7 1577 aa22.04■■□□□ 1.12
SLC6A6P1-201ENST00000413933 TOPBP1Q92547 1522 aa22.02■■□□□ 1.12
SLC6A6P1-201ENST00000413933 MRC2Q9UBG0 1479 aa22.01■■□□□ 1.11
SLC6A6P1-201ENST00000413933 THOC2Q8NI27 1593 aaKnown RBP21.96■■□□□ 1.11
SLC6A6P1-201ENST00000413933 FGD5Q6ZNL6 1462 aa21.94■■□□□ 1.1
SLC6A6P1-201ENST00000413933 WDR62O43379 1518 aa21.93■■□□□ 1.1
SLC6A6P1-201ENST00000413933 POLA1P09884 1462 aaPredicted RBP21.9■■□□□ 1.1
SLC6A6P1-201ENST00000413933 SOGA1O94964 1423 aa21.83■■□□□ 1.09
SLC6A6P1-201ENST00000413933 ACIN1Q9UKV3 1341 aaKnown RBP21.82■■□□□ 1.08
SLC6A6P1-201ENST00000413933 RAD54L2Q9Y4B4 1467 aa21.81■■□□□ 1.08
SLC6A6P1-201ENST00000413933 RUSC2Q8N2Y8 1516 aa21.79■■□□□ 1.08
SLC6A6P1-201ENST00000413933 CUX2O14529 1486 aa21.78■■□□□ 1.08
SLC6A6P1-201ENST00000413933 FAM9AQ8IZU1 332 aaPredicted RBP21.76■■□□□ 1.07
SLC6A6P1-201ENST00000413933 TARBP1Q13395 1621 aaKnown RBP21.74■■□□□ 1.07
SLC6A6P1-201ENST00000413933 WDR97A6NE52 1622 aa21.74■■□□□ 1.07
SLC6A6P1-201ENST00000413933 ABCA10Q8WWZ4 1543 aa21.73■■□□□ 1.07
SLC6A6P1-201ENST00000413933 CENPBP07199 599 aaPredicted RBP21.69■■□□□ 1.06
SLC6A6P1-201ENST00000413933 KIF27Q86VH2 1401 aa21.68■■□□□ 1.06
SLC6A6P1-201ENST00000413933 IFT140Q96RY7 1462 aa21.68■■□□□ 1.06
SLC6A6P1-201ENST00000413933 EEA1Q15075 1411 aa21.67■■□□□ 1.06
SLC6A6P1-201ENST00000413933 TDRD9Q8NDG6 1382 aaKnown RBP21.62■■□□□ 1.05
SLC6A6P1-201ENST00000413933 ABCA5Q8WWZ7 1642 aa21.61■■□□□ 1.05
SLC6A6P1-201ENST00000413933 ZNF608Q9ULD9 1512 aaPredicted RBP21.6■■□□□ 1.05
SLC6A6P1-201ENST00000413933 CSRNP3Q8WYN3 585 aa21.6■■□□□ 1.05
SLC6A6P1-201ENST00000413933 NEUROD1Q13562 356 aa21.59■■□□□ 1.05
SLC6A6P1-201ENST00000413933 AQRO60306 1485 aaKnown RBP eCLIP21.55■■□□□ 1.04
SLC6A6P1-201ENST00000413933 GAPVD1Q14C86 1478 aa21.55■■□□□ 1.04
SLC6A6P1-201ENST00000413933 IGF1RP08069 1367 aa21.53■■□□□ 1.04
SLC6A6P1-201ENST00000413933 EIF4G3O43432 1585 aaKnown RBP21.53■■□□□ 1.04
SLC6A6P1-201ENST00000413933 PBRM1Q86U86 1689 aa21.5■■□□□ 1.03
SLC6A6P1-201ENST00000413933 GTF3C3Q9Y5Q9 886 aa21.5■■□□□ 1.03
SLC6A6P1-201ENST00000413933 EHMT2Q96KQ7 1210 aa21.47■■□□□ 1.03
SLC6A6P1-201ENST00000413933 ERICH3Q5RHP9 1530 aa21.47■■□□□ 1.03
SLC6A6P1-201ENST00000413933 PRXQ9BXM0 1461 aa21.45■■□□□ 1.03
SLC6A6P1-201ENST00000413933 KIF21BO75037 1637 aa21.45■■□□□ 1.02
SLC6A6P1-201ENST00000413933 GRIN2BQ13224 1484 aa21.44■■□□□ 1.02
SLC6A6P1-201ENST00000413933 CUL7Q14999 1698 aa21.42■■□□□ 1.02
SLC6A6P1-201ENST00000413933 RAPGEF2Q9Y4G8 1499 aa21.41■■□□□ 1.02
SLC6A6P1-201ENST00000413933 CARMIL1Q5VZK9 1371 aa21.41■■□□□ 1.02
SLC6A6P1-201ENST00000413933 DIEXFQ68CQ4 756 aaKnown RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms