Protein–RNA interactions for Protein: Q8NDX2

SLC17A8, Vesicular glutamate transporter 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC17A8Q8NDX2 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC17A8Q8NDX2 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC17A8Q8NDX2 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC17A8Q8NDX2 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC17A8Q8NDX2 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC17A8Q8NDX2 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC17A8Q8NDX2 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC17A8Q8NDX2 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC17A8Q8NDX2 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC17A8Q8NDX2 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC17A8Q8NDX2 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC17A8Q8NDX2 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC17A8Q8NDX2 RPL13AP25-201ENST00000484130 612 ntBASIC17.19■□□□□ 0.34
SLC17A8Q8NDX2 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC17A8Q8NDX2 AP006547.1-201ENST00000563435 692 ntBASIC17.19■□□□□ 0.34
SLC17A8Q8NDX2 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
SLC17A8Q8NDX2 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC17A8Q8NDX2 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC17A8Q8NDX2 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC17A8Q8NDX2 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC17A8Q8NDX2 PLS3-210ENST00000626746 216 ntTSL 4 BASIC17.19■□□□□ 0.34
SLC17A8Q8NDX2 RHOXF1P1-202ENST00000635473 501 ntBASIC17.19■□□□□ 0.34
SLC17A8Q8NDX2 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SLC17A8Q8NDX2 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC17A8Q8NDX2 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC17A8Q8NDX2 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC17A8Q8NDX2 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC17A8Q8NDX2 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC17A8Q8NDX2 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC17A8Q8NDX2 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC17A8Q8NDX2 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC17A8Q8NDX2 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC17A8Q8NDX2 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC17A8Q8NDX2 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC17A8Q8NDX2 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC17A8Q8NDX2 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC17A8Q8NDX2 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC17A8Q8NDX2 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 DBET-201ENST00000630918 3363 ntBASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 FTH1P14-201ENST00000482930 551 ntBASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC17A8Q8NDX2 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
SLC17A8Q8NDX2 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SLC17A8Q8NDX2 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SLC17A8Q8NDX2 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC17A8Q8NDX2 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC17A8Q8NDX2 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC17A8Q8NDX2 SSR4P1-203ENST00000599569 2260 ntBASIC17.17■□□□□ 0.34
SLC17A8Q8NDX2 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC17A8Q8NDX2 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC17A8Q8NDX2 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.17■□□□□ 0.34
SLC17A8Q8NDX2 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC17A8Q8NDX2 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC17A8Q8NDX2 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SLC17A8Q8NDX2 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC17A8Q8NDX2 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC17A8Q8NDX2 MIR769-201ENST00000390225 118 ntBASIC17.17■□□□□ 0.34
SLC17A8Q8NDX2 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC17A8Q8NDX2 IDS-203ENST00000428056 1213 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC17A8Q8NDX2 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC17A8Q8NDX2 RN7SL399P-201ENST00000471648 279 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms