RNA–Protein interactions for RNA: ENST00000626746.2

PLS3-210, Transcript of plastin 3, humanhuman

TSL 4 BASIC

Gene PLS3, Length 216 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS3-210ENST00000626746 NISCHQ9Y2I1 1504 aa33.07■■■□□ 2.88
PLS3-210ENST00000626746 ABCC9O60706 1549 aa31.19■■■□□ 2.58
PLS3-210ENST00000626746 DNAJC5BQ9UF47 199 aa30.43■■■□□ 2.46
PLS3-210ENST00000626746 CCDC180Q9P1Z9 1646 aa30.08■■■□□ 2.41
PLS3-210ENST00000626746 RB1CC1Q8TDY2 1594 aa29.15■■■□□ 2.26
PLS3-210ENST00000626746 PABPN1Q86U42 306 aaKnown RBP eCLIP28.91■■■□□ 2.22
PLS3-210ENST00000626746 NACADO15069 1562 aa28.71■■■□□ 2.19
PLS3-210ENST00000626746 DNAJC5Q9H3Z4 198 aa28.65■■■□□ 2.18
PLS3-210ENST00000626746 UNC13AQ9UPW8 1703 aa28.61■■■□□ 2.17
PLS3-210ENST00000626746 BICRAQ9NZM4 1560 aa28.5■■■□□ 2.15
PLS3-210ENST00000626746 DCAF8L2P0C7V8 631 aa28.3■■■□□ 2.12
PLS3-210ENST00000626746 CECR2Q9BXF3 1484 aa28.21■■■□□ 2.11
PLS3-210ENST00000626746 CC2D2AQ9P2K1 1620 aa28.14■■■□□ 2.09
PLS3-210ENST00000626746 MYO15BQ96JP2 1530 aa27.98■■■□□ 2.07
PLS3-210ENST00000626746 SHROOM4Q9ULL8 1493 aa27.83■■■□□ 2.05
PLS3-210ENST00000626746 EIF4G1Q04637 1599 aaKnown RBP27.8■■■□□ 2.04
PLS3-210ENST00000626746 SCRIBQ14160 1630 aa27.34■■□□□ 1.97
PLS3-210ENST00000626746 CUX2O14529 1486 aa27.3■■□□□ 1.96
PLS3-210ENST00000626746 DCAF1Q9Y4B6 1507 aa27.22■■□□□ 1.95
PLS3-210ENST00000626746 ZCCHC6Q5VYS8 1495 aaKnown RBP27.15■■□□□ 1.94
PLS3-210ENST00000626746 ERCC6Q03468 1493 aa26.92■■□□□ 1.9
PLS3-210ENST00000626746 TRIM41Q8WV44 630 aa26.83■■□□□ 1.89
PLS3-210ENST00000626746 NCAPD3P42695 1498 aa26.58■■□□□ 1.85
PLS3-210ENST00000626746 NESP48681 1621 aa26.54■■□□□ 1.84
PLS3-210ENST00000626746 THOC2Q8NI27 1593 aaKnown RBP26.46■■□□□ 1.83
PLS3-210ENST00000626746 ATAD2BQ9ULI0 1458 aa26.34■■□□□ 1.81
PLS3-210ENST00000626746 HMGXB3Q12766 1538 aa26.22■■□□□ 1.79
PLS3-210ENST00000626746 SMARCA2P51531 1590 aa26.15■■□□□ 1.78
PLS3-210ENST00000626746 KIF21AQ7Z4S6 1674 aa26.12■■□□□ 1.77
PLS3-210ENST00000626746 LAMC3Q9Y6N6 1575 aa26.08■■□□□ 1.77
PLS3-210ENST00000626746 SMARCA4P51532 1647 aa26■■□□□ 1.75
PLS3-210ENST00000626746 PDS5BQ9NTI5 1447 aa25.96■■□□□ 1.75
PLS3-210ENST00000626746 BAZ1BQ9UIG0 1483 aaKnown RBP25.94■■□□□ 1.74
PLS3-210ENST00000626746 BAZ1AQ9NRL2 1556 aaPredicted RBP25.93■■□□□ 1.74
PLS3-210ENST00000626746 OSCARQ8IYS5 282 aa25.89■■□□□ 1.74
PLS3-210ENST00000626746 WDR62O43379 1518 aa25.83■■□□□ 1.72
PLS3-210ENST00000626746 MRC2Q9UBG0 1479 aa25.82■■□□□ 1.72
PLS3-210ENST00000626746 PEG3Q9GZU2 1588 aa25.78■■□□□ 1.72
PLS3-210ENST00000626746 RIMBP3CA6NJZ7 1639 aa25.7■■□□□ 1.71
PLS3-210ENST00000626746 RIMBP3BA6NNM3 1639 aa25.7■■□□□ 1.71
PLS3-210ENST00000626746 RIMBP3Q9UFD9 1639 aa25.7■■□□□ 1.71
PLS3-210ENST00000626746 CADPSQ9ULU8 1353 aa25.69■■□□□ 1.7
PLS3-210ENST00000626746 MROH2BQ7Z745 1585 aa25.49■■□□□ 1.67
PLS3-210ENST00000626746 ARHGEF11O15085 1522 aa25.49■■□□□ 1.67
PLS3-210ENST00000626746 CEP164Q9UPV0 1460 aa25.47■■□□□ 1.67
PLS3-210ENST00000626746 AEBP2Q6ZN18 517 aaPredicted RBP25.4■■□□□ 1.66
PLS3-210ENST00000626746 TRHP20396 242 aaPredicted RBP25.38■■□□□ 1.65
PLS3-210ENST00000626746 CYB5RLQ6IPT4 315 aa25.38■■□□□ 1.65
PLS3-210ENST00000626746 FANCD2Q9BXW9 1451 aa25.38■■□□□ 1.65
PLS3-210ENST00000626746 URB2Q14146 1524 aaKnown RBP25.3■■□□□ 1.64
PLS3-210ENST00000626746 ARAP1Q96P48 1450 aa25.2■■□□□ 1.62
PLS3-210ENST00000626746 CFTRP13569 1480 aa25.19■■□□□ 1.62
PLS3-210ENST00000626746 ZNF608Q9ULD9 1512 aaPredicted RBP25.17■■□□□ 1.62
PLS3-210ENST00000626746 WIZO95785 1651 aa25.12■■□□□ 1.61
PLS3-210ENST00000626746 IFT140Q96RY7 1462 aa25.02■■□□□ 1.6
PLS3-210ENST00000626746 CHD1O14646 1710 aa24.95■■□□□ 1.59
PLS3-210ENST00000626746 RSF1Q96T23 1441 aaPredicted RBP24.95■■□□□ 1.58
PLS3-210ENST00000626746 EIF4G3O43432 1585 aaKnown RBP24.91■■□□□ 1.58
PLS3-210ENST00000626746 TOPBP1Q92547 1522 aa24.8■■□□□ 1.56
PLS3-210ENST00000626746 AQRO60306 1485 aaKnown RBP eCLIP24.79■■□□□ 1.56
PLS3-210ENST00000626746 PRDM2Q13029 1718 aa24.78■■□□□ 1.56
PLS3-210ENST00000626746 FBLN2P98095 1184 aa24.75■■□□□ 1.55
PLS3-210ENST00000626746 TARBP1Q13395 1621 aaKnown RBP24.7■■□□□ 1.54
PLS3-210ENST00000626746 TOP2AP11388 1531 aaKnown RBP24.66■■□□□ 1.54
PLS3-210ENST00000626746 CLASP1Q7Z460 1538 aa24.66■■□□□ 1.54
PLS3-210ENST00000626746 ILDR1Q86SU0 546 aaPredicted RBP24.62■■□□□ 1.53
PLS3-210ENST00000626746 ABCC8Q09428 1581 aa24.6■■□□□ 1.53
PLS3-210ENST00000626746 DNMBPQ6XZF7 1577 aa24.58■■□□□ 1.52
PLS3-210ENST00000626746 POLA1P09884 1462 aaPredicted RBP24.48■■□□□ 1.51
PLS3-210ENST00000626746 SYNJ1O43426 1573 aa24.46■■□□□ 1.51
PLS3-210ENST00000626746 CCDC88BA6NC98 1476 aa24.45■■□□□ 1.51
PLS3-210ENST00000626746 GAPVD1Q14C86 1478 aa24.45■■□□□ 1.51
PLS3-210ENST00000626746 SNAPC4Q5SXM2 1469 aa24.45■■□□□ 1.51
PLS3-210ENST00000626746 TDRD9Q8NDG6 1382 aaKnown RBP24.45■■□□□ 1.5
PLS3-210ENST00000626746 RAD54L2Q9Y4B4 1467 aa24.44■■□□□ 1.5
PLS3-210ENST00000626746 CHMP7Q8WUX9 453 aaPredicted RBP24.41■■□□□ 1.5
PLS3-210ENST00000626746 SOGA1O94964 1423 aa24.34■■□□□ 1.49
PLS3-210ENST00000626746 MAGI1Q96QZ7 1491 aaPredicted RBP24.32■■□□□ 1.48
PLS3-210ENST00000626746 KDM4FA0A1W2PPD8 638 aa24.28■■□□□ 1.48
PLS3-210ENST00000626746 SYNJ2O15056 1496 aa24.27■■□□□ 1.48
PLS3-210ENST00000626746 KIF13AQ9H1H9 1805 aa24.27■■□□□ 1.48
PLS3-210ENST00000626746 WDR97A6NE52 1622 aa24.27■■□□□ 1.48
PLS3-210ENST00000626746 ERCC6L2Q5T890 1561 aa24.25■■□□□ 1.47
PLS3-210ENST00000626746 GRIN2BQ13224 1484 aa24.22■■□□□ 1.47
PLS3-210ENST00000626746 FGD5Q6ZNL6 1462 aa24.15■■□□□ 1.46
PLS3-210ENST00000626746 PBRM1Q86U86 1689 aa24.05■■□□□ 1.44
PLS3-210ENST00000626746 CEP170Q5SW79 1584 aa24.04■■□□□ 1.44
PLS3-210ENST00000626746 CUX1P39880 1505 aa24■■□□□ 1.43
PLS3-210ENST00000626746 FAM69CQ0P6D2 419 aa23.96■■□□□ 1.43
PLS3-210ENST00000626746 SHROOM2Q13796 1616 aa23.95■■□□□ 1.43
PLS3-210ENST00000626746 ABCC10Q5T3U5 1492 aa23.95■■□□□ 1.42
PLS3-210ENST00000626746 GRIN2AQ12879 1464 aa23.93■■□□□ 1.42
PLS3-210ENST00000626746 NUP160Q12769 1436 aa23.93■■□□□ 1.42
PLS3-210ENST00000626746 ABCA5Q8WWZ7 1642 aa23.89■■□□□ 1.42
PLS3-210ENST00000626746 KDM6BO15054 1643 aa23.88■■□□□ 1.41
PLS3-210ENST00000626746 SUPT5HO00267 1087 aaKnown RBP23.85■■□□□ 1.41
PLS3-210ENST00000626746 DIP2BQ9P265 1576 aa23.85■■□□□ 1.41
PLS3-210ENST00000626746 ABCA10Q8WWZ4 1543 aa23.82■■□□□ 1.4
PLS3-210ENST00000626746 MAPKBP1O60336 1514 aa23.8■■□□□ 1.4
PLS3-210ENST00000626746 ADAMTS12P58397 1594 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms