Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.96□□□□□ -0.17
CXCR4P61073 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.96□□□□□ -0.17
CXCR4P61073 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.96□□□□□ -0.17
CXCR4P61073 AP000842.3-202ENST00000569238 1080 ntBASIC13.96□□□□□ -0.17
CXCR4P61073 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CXCR4P61073 AC026979.3-201ENST00000607315 403 ntBASIC13.96□□□□□ -0.17
CXCR4P61073 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CXCR4P61073 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.96□□□□□ -0.17
CXCR4P61073 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CXCR4P61073 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.96□□□□□ -0.17
CXCR4P61073 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.96□□□□□ -0.17
CXCR4P61073 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CXCR4P61073 AC016397.2-201ENST00000624848 1985 ntBASIC13.96□□□□□ -0.18
CXCR4P61073 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.96□□□□□ -0.18
CXCR4P61073 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
CXCR4P61073 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CXCR4P61073 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CXCR4P61073 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CXCR4P61073 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.96□□□□□ -0.18
CXCR4P61073 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.96□□□□□ -0.18
CXCR4P61073 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCR4P61073 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CXCR4P61073 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CXCR4P61073 ST20-AS1-201ENST00000560255 4223 ntBASIC13.95□□□□□ -0.18
CXCR4P61073 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.95□□□□□ -0.18
CXCR4P61073 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CXCR4P61073 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.95□□□□□ -0.18
CXCR4P61073 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CXCR4P61073 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.95□□□□□ -0.18
CXCR4P61073 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.95□□□□□ -0.18
CXCR4P61073 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCR4P61073 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCR4P61073 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CXCR4P61073 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCR4P61073 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCR4P61073 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.95□□□□□ -0.18
CXCR4P61073 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.95□□□□□ -0.18
CXCR4P61073 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCR4P61073 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCR4P61073 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.95□□□□□ -0.18
CXCR4P61073 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CXCR4P61073 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCR4P61073 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.95□□□□□ -0.18
CXCR4P61073 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CXCR4P61073 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCR4P61073 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCR4P61073 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCR4P61073 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCR4P61073 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCR4P61073 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CXCR4P61073 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CXCR4P61073 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCR4P61073 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.95□□□□□ -0.18
CXCR4P61073 MED15P5-201ENST00000423150 992 ntBASIC13.95□□□□□ -0.18
CXCR4P61073 FAM58CP-201ENST00000435741 640 ntBASIC13.95□□□□□ -0.18
CXCR4P61073 AL591424.1-201ENST00000442569 1213 ntBASIC13.95□□□□□ -0.18
CXCR4P61073 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCR4P61073 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.95□□□□□ -0.18
CXCR4P61073 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.95□□□□□ -0.18
CXCR4P61073 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.95□□□□□ -0.18
CXCR4P61073 AC243562.1-201ENST00000560672 389 ntBASIC13.95□□□□□ -0.18
CXCR4P61073 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.95□□□□□ -0.18
CXCR4P61073 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CXCR4P61073 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CXCR4P61073 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CXCR4P61073 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CXCR4P61073 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.95□□□□□ -0.18
CXCR4P61073 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCR4P61073 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CXCR4P61073 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCR4P61073 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCR4P61073 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CXCR4P61073 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCR4P61073 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCR4P61073 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CXCR4P61073 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCR4P61073 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CXCR4P61073 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.95□□□□□ -0.18
CXCR4P61073 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CXCR4P61073 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
CXCR4P61073 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CXCR4P61073 AC126335.2-201ENST00000623362 4637 ntBASIC13.94□□□□□ -0.18
CXCR4P61073 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CXCR4P61073 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CXCR4P61073 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CXCR4P61073 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CXCR4P61073 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CXCR4P61073 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.94□□□□□ -0.18
CXCR4P61073 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.94□□□□□ -0.18
CXCR4P61073 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CXCR4P61073 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.94□□□□□ -0.18
CXCR4P61073 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CXCR4P61073 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CXCR4P61073 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CXCR4P61073 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CXCR4P61073 MIR346-201ENST00000362234 95 ntBASIC13.94□□□□□ -0.18
CXCR4P61073 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
CXCR4P61073 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CXCR4P61073 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CXCR4P61073 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms