Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SFTPBP07988 AC007967.4-201ENST00000614700 386 ntBASIC13.38□□□□□ -0.27
SFTPBP07988 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SFTPBP07988 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SFTPBP07988 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SFTPBP07988 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SFTPBP07988 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SFTPBP07988 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SFTPBP07988 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.38□□□□□ -0.27
SFTPBP07988 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.38□□□□□ -0.27
SFTPBP07988 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SFTPBP07988 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
SFTPBP07988 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.38□□□□□ -0.27
SFTPBP07988 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SFTPBP07988 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SFTPBP07988 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SFTPBP07988 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
SFTPBP07988 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SFTPBP07988 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
SFTPBP07988 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SFTPBP07988 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.38□□□□□ -0.27
SFTPBP07988 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SFTPBP07988 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.37□□□□□ -0.27
SFTPBP07988 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SFTPBP07988 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
SFTPBP07988 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.37□□□□□ -0.27
SFTPBP07988 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SFTPBP07988 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SFTPBP07988 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.37□□□□□ -0.27
SFTPBP07988 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SFTPBP07988 LINC00528-201ENST00000600723 2160 ntBASIC13.37□□□□□ -0.27
SFTPBP07988 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
SFTPBP07988 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SFTPBP07988 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.37□□□□□ -0.27
SFTPBP07988 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SFTPBP07988 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SFTPBP07988 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.37□□□□□ -0.27
SFTPBP07988 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.37□□□□□ -0.27
SFTPBP07988 BASP1P1-201ENST00000430708 665 ntBASIC13.37□□□□□ -0.27
SFTPBP07988 MTND6P24-201ENST00000440466 518 ntBASIC13.37□□□□□ -0.27
SFTPBP07988 AC097493.3-201ENST00000509725 367 ntBASIC13.37□□□□□ -0.27
SFTPBP07988 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.37□□□□□ -0.27
SFTPBP07988 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SFTPBP07988 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.37□□□□□ -0.27
SFTPBP07988 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.37□□□□□ -0.27
SFTPBP07988 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.37□□□□□ -0.27
SFTPBP07988 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.37□□□□□ -0.27
SFTPBP07988 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SFTPBP07988 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.37□□□□□ -0.27
SFTPBP07988 AL096865.1-201ENST00000606796 927 ntBASIC13.37□□□□□ -0.27
SFTPBP07988 AL158211.3-201ENST00000607385 239 ntBASIC13.37□□□□□ -0.27
SFTPBP07988 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.37□□□□□ -0.27
SFTPBP07988 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SFTPBP07988 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SFTPBP07988 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SFTPBP07988 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.37□□□□□ -0.27
SFTPBP07988 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SFTPBP07988 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SFTPBP07988 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SFTPBP07988 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SFTPBP07988 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SFTPBP07988 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SFTPBP07988 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.37□□□□□ -0.27
SFTPBP07988 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SFTPBP07988 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SFTPBP07988 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SFTPBP07988 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SFTPBP07988 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SFTPBP07988 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.36□□□□□ -0.27
SFTPBP07988 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SFTPBP07988 AGAP7P-201ENST00000582299 2062 ntBASIC13.36□□□□□ -0.27
SFTPBP07988 AGAP14-201ENST00000624701 2060 ntBASIC13.36□□□□□ -0.27
SFTPBP07988 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SFTPBP07988 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
SFTPBP07988 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.36□□□□□ -0.27
SFTPBP07988 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.36□□□□□ -0.27
SFTPBP07988 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.36□□□□□ -0.27
SFTPBP07988 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.36□□□□□ -0.27
SFTPBP07988 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.36□□□□□ -0.27
SFTPBP07988 AC023024.2-201ENST00000623561 1993 ntBASIC13.36□□□□□ -0.27
SFTPBP07988 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SFTPBP07988 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.36□□□□□ -0.27
SFTPBP07988 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SFTPBP07988 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SFTPBP07988 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.36□□□□□ -0.27
SFTPBP07988 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.36□□□□□ -0.27
SFTPBP07988 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SFTPBP07988 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SFTPBP07988 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SFTPBP07988 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.36□□□□□ -0.27
SFTPBP07988 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SFTPBP07988 AC148477.4-201ENST00000613430 1793 ntBASIC13.36□□□□□ -0.27
SFTPBP07988 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SFTPBP07988 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SFTPBP07988 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SFTPBP07988 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
SFTPBP07988 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SFTPBP07988 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SFTPBP07988 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.36□□□□□ -0.27
SFTPBP07988 AC092580.3-201ENST00000430932 139 ntBASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms