RNA–Protein interactions for RNA: ENST00000572355.5

HCFC1R1-203, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3 BASIC

Gene HCFC1R1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-203ENST00000572355 NISCHQ9Y2I1 1504 aa40.67■■■■■ 4.1
HCFC1R1-203ENST00000572355 ABCC9O60706 1549 aa36.85■■■■□ 3.49
HCFC1R1-203ENST00000572355 CCDC180Q9P1Z9 1646 aa36.66■■■■□ 3.46
HCFC1R1-203ENST00000572355 RB1CC1Q8TDY2 1594 aa34.97■■■■□ 3.19
HCFC1R1-203ENST00000572355 DNAJC5BQ9UF47 199 aa34.67■■■■□ 3.14
HCFC1R1-203ENST00000572355 NACADO15069 1562 aa34.65■■■■□ 3.14
HCFC1R1-203ENST00000572355 DCAF8L2P0C7V8 631 aa34.42■■■■□ 3.1
HCFC1R1-203ENST00000572355 UNC13AQ9UPW8 1703 aa34.26■■■■□ 3.07
HCFC1R1-203ENST00000572355 PABPN1Q86U42 306 aaKnown RBP eCLIP34.23■■■■□ 3.07
HCFC1R1-203ENST00000572355 MYO15BQ96JP2 1530 aa34.05■■■■□ 3.04
HCFC1R1-203ENST00000572355 BICRAQ9NZM4 1560 aa33.96■■■■□ 3.03
HCFC1R1-203ENST00000572355 ZCCHC6Q5VYS8 1495 aaKnown RBP33.69■■■□□ 2.98
HCFC1R1-203ENST00000572355 DCAF1Q9Y4B6 1507 aa33.55■■■□□ 2.96
HCFC1R1-203ENST00000572355 SHROOM4Q9ULL8 1493 aa33.44■■■□□ 2.94
HCFC1R1-203ENST00000572355 SCRIBQ14160 1630 aa33.43■■■□□ 2.94
HCFC1R1-203ENST00000572355 CC2D2AQ9P2K1 1620 aa33.29■■■□□ 2.92
HCFC1R1-203ENST00000572355 CECR2Q9BXF3 1484 aa33.19■■■□□ 2.9
HCFC1R1-203ENST00000572355 EIF4G1Q04637 1599 aaKnown RBP33.16■■■□□ 2.9
HCFC1R1-203ENST00000572355 DNAJC5Q9H3Z4 198 aa31.97■■■□□ 2.71
HCFC1R1-203ENST00000572355 NCAPD3P42695 1498 aa31.94■■■□□ 2.7
HCFC1R1-203ENST00000572355 ERCC6Q03468 1493 aa31.85■■■□□ 2.69
HCFC1R1-203ENST00000572355 ATAD2BQ9ULI0 1458 aa31.85■■■□□ 2.69
HCFC1R1-203ENST00000572355 SMARCA4P51532 1647 aa31.83■■■□□ 2.69
HCFC1R1-203ENST00000572355 CUX2O14529 1486 aa31.82■■■□□ 2.68
HCFC1R1-203ENST00000572355 SMARCA2P51531 1590 aa31.78■■■□□ 2.68
HCFC1R1-203ENST00000572355 HMGXB3Q12766 1538 aa31.76■■■□□ 2.68
HCFC1R1-203ENST00000572355 BAZ1AQ9NRL2 1556 aaPredicted RBP31.6■■■□□ 2.65
HCFC1R1-203ENST00000572355 NESP48681 1621 aa31.6■■■□□ 2.65
HCFC1R1-203ENST00000572355 BAZ1BQ9UIG0 1483 aaKnown RBP31.58■■■□□ 2.65
HCFC1R1-203ENST00000572355 PEG3Q9GZU2 1588 aa31.47■■■□□ 2.63
HCFC1R1-203ENST00000572355 MROH2BQ7Z745 1585 aa31.36■■■□□ 2.61
HCFC1R1-203ENST00000572355 THOC2Q8NI27 1593 aaKnown RBP31.35■■■□□ 2.61
HCFC1R1-203ENST00000572355 LAMC3Q9Y6N6 1575 aa31.33■■■□□ 2.61
HCFC1R1-203ENST00000572355 KIF21AQ7Z4S6 1674 aa31.25■■■□□ 2.59
HCFC1R1-203ENST00000572355 PDS5BQ9NTI5 1447 aa31.11■■■□□ 2.57
HCFC1R1-203ENST00000572355 WIZO95785 1651 aa31.02■■■□□ 2.56
HCFC1R1-203ENST00000572355 CADPSQ9ULU8 1353 aa30.97■■■□□ 2.55
HCFC1R1-203ENST00000572355 MRC2Q9UBG0 1479 aa30.9■■■□□ 2.54
HCFC1R1-203ENST00000572355 WDR62O43379 1518 aa30.84■■■□□ 2.53
HCFC1R1-203ENST00000572355 CEP164Q9UPV0 1460 aa30.76■■■□□ 2.51
HCFC1R1-203ENST00000572355 FANCD2Q9BXW9 1451 aa30.68■■■□□ 2.5
HCFC1R1-203ENST00000572355 RSF1Q96T23 1441 aaPredicted RBP30.59■■■□□ 2.49
HCFC1R1-203ENST00000572355 TOP2AP11388 1531 aaKnown RBP30.58■■■□□ 2.49
HCFC1R1-203ENST00000572355 CFTRP13569 1480 aa30.58■■■□□ 2.49
HCFC1R1-203ENST00000572355 TRIM41Q8WV44 630 aa30.58■■■□□ 2.49
HCFC1R1-203ENST00000572355 URB2Q14146 1524 aaKnown RBP30.45■■■□□ 2.47
HCFC1R1-203ENST00000572355 PRDM2Q13029 1718 aa30.39■■■□□ 2.46
HCFC1R1-203ENST00000572355 OSCARQ8IYS5 282 aa30.27■■■□□ 2.44
HCFC1R1-203ENST00000572355 CCDC88BA6NC98 1476 aa30.19■■■□□ 2.42
HCFC1R1-203ENST00000572355 IFT140Q96RY7 1462 aa30.11■■■□□ 2.41
HCFC1R1-203ENST00000572355 ZNF608Q9ULD9 1512 aaPredicted RBP30.11■■■□□ 2.41
HCFC1R1-203ENST00000572355 TOPBP1Q92547 1522 aa30.07■■■□□ 2.4
HCFC1R1-203ENST00000572355 RIMBP3CA6NJZ7 1639 aa30.02■■■□□ 2.4
HCFC1R1-203ENST00000572355 RIMBP3BA6NNM3 1639 aa30.02■■■□□ 2.4
HCFC1R1-203ENST00000572355 RIMBP3Q9UFD9 1639 aa30.02■■■□□ 2.4
HCFC1R1-203ENST00000572355 EIF4G3O43432 1585 aaKnown RBP29.98■■■□□ 2.39
HCFC1R1-203ENST00000572355 DNMBPQ6XZF7 1577 aa29.97■■■□□ 2.39
HCFC1R1-203ENST00000572355 ABCC8Q09428 1581 aa29.94■■■□□ 2.38
HCFC1R1-203ENST00000572355 ARHGEF11O15085 1522 aa29.87■■■□□ 2.37
HCFC1R1-203ENST00000572355 TARBP1Q13395 1621 aaKnown RBP29.84■■■□□ 2.37
HCFC1R1-203ENST00000572355 CHD1O14646 1710 aa29.83■■■□□ 2.37
HCFC1R1-203ENST00000572355 AQRO60306 1485 aaKnown RBP eCLIP29.78■■■□□ 2.362e-10■■■■■ 40.6
HCFC1R1-203ENST00000572355 POLA1P09884 1462 aaPredicted RBP29.75■■■□□ 2.35
HCFC1R1-203ENST00000572355 RAD54L2Q9Y4B4 1467 aa29.65■■■□□ 2.34
HCFC1R1-203ENST00000572355 FBLN2P98095 1184 aa29.64■■■□□ 2.34
HCFC1R1-203ENST00000572355 CYB5RLQ6IPT4 315 aa29.61■■■□□ 2.33
HCFC1R1-203ENST00000572355 ARAP1Q96P48 1450 aa29.57■■■□□ 2.32
HCFC1R1-203ENST00000572355 SOGA1O94964 1423 aa29.57■■■□□ 2.32
HCFC1R1-203ENST00000572355 FGD5Q6ZNL6 1462 aa29.55■■■□□ 2.32
HCFC1R1-203ENST00000572355 TDRD9Q8NDG6 1382 aaKnown RBP29.55■■■□□ 2.32
HCFC1R1-203ENST00000572355 SNAPC4Q5SXM2 1469 aa29.52■■■□□ 2.32
HCFC1R1-203ENST00000572355 WDR97A6NE52 1622 aa29.5■■■□□ 2.31
HCFC1R1-203ENST00000572355 CUX1P39880 1505 aa29.49■■■□□ 2.31
HCFC1R1-203ENST00000572355 CLASP1Q7Z460 1538 aa29.41■■■□□ 2.3
HCFC1R1-203ENST00000572355 MAGI1Q96QZ7 1491 aaPredicted RBP29.4■■■□□ 2.3
HCFC1R1-203ENST00000572355 TRHP20396 242 aaPredicted RBP29.39■■■□□ 2.3
HCFC1R1-203ENST00000572355 SYNJ1O43426 1573 aa29.39■■■□□ 2.29
HCFC1R1-203ENST00000572355 GRIN2BQ13224 1484 aa29.36■■■□□ 2.29
HCFC1R1-203ENST00000572355 CHMP7Q8WUX9 453 aaPredicted RBP29.35■■■□□ 2.29
HCFC1R1-203ENST00000572355 PBRM1Q86U86 1689 aa29.34■■■□□ 2.29
HCFC1R1-203ENST00000572355 SYNJ2O15056 1496 aa29.3■■■□□ 2.28
HCFC1R1-203ENST00000572355 GAPVD1Q14C86 1478 aa29.24■■■□□ 2.27
HCFC1R1-203ENST00000572355 ABCA5Q8WWZ7 1642 aa29.2■■■□□ 2.27
HCFC1R1-203ENST00000572355 ABCA10Q8WWZ4 1543 aa29.17■■■□□ 2.26
HCFC1R1-203ENST00000572355 SUPT5HO00267 1087 aaKnown RBP29.09■■■□□ 2.25
HCFC1R1-203ENST00000572355 ADAMTS12P58397 1594 aa29.01■■■□□ 2.24
HCFC1R1-203ENST00000572355 GRIN2AQ12879 1464 aa29.01■■■□□ 2.23
HCFC1R1-203ENST00000572355 WRNQ14191 1432 aaPredicted RBP eCLIP29■■■□□ 2.23
HCFC1R1-203ENST00000572355 BIVM-ERCC5R4GMW8 1640 aa28.98■■■□□ 2.23
HCFC1R1-203ENST00000572355 ERCC6L2Q5T890 1561 aa28.96■■■□□ 2.23
HCFC1R1-203ENST00000572355 TOP2BQ02880 1626 aa28.96■■■□□ 2.23
HCFC1R1-203ENST00000572355 CEP170Q5SW79 1584 aa28.95■■■□□ 2.22
HCFC1R1-203ENST00000572355 NUP160Q12769 1436 aa28.89■■■□□ 2.22
HCFC1R1-203ENST00000572355 FHAD1B1AJZ9 1412 aa28.85■■■□□ 2.21
HCFC1R1-203ENST00000572355 SHROOM2Q13796 1616 aa28.83■■■□□ 2.21
HCFC1R1-203ENST00000572355 ERICH3Q5RHP9 1530 aa28.81■■■□□ 2.2
HCFC1R1-203ENST00000572355 AEBP2Q6ZN18 517 aaPredicted RBP28.69■■■□□ 2.18
HCFC1R1-203ENST00000572355 PRG4Q92954 1404 aaPredicted RBP28.64■■■□□ 2.18
HCFC1R1-203ENST00000572355 RUSC2Q8N2Y8 1516 aa28.62■■■□□ 2.17
HCFC1R1-203ENST00000572355 KIF13AQ9H1H9 1805 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms