Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A3P43003 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.14□□□□□ -0.15
SLC1A3P43003 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A3P43003 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A3P43003 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A3P43003 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A3P43003 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A3P43003 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A3P43003 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.14□□□□□ -0.15
SLC1A3P43003 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A3P43003 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.14□□□□□ -0.15
SLC1A3P43003 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A3P43003 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.14□□□□□ -0.15
SLC1A3P43003 AC093214.1-201ENST00000511688 1107 ntBASIC14.14□□□□□ -0.15
SLC1A3P43003 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.14□□□□□ -0.15
SLC1A3P43003 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A3P43003 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.14□□□□□ -0.15
SLC1A3P43003 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.14□□□□□ -0.15
SLC1A3P43003 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.14□□□□□ -0.15
SLC1A3P43003 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
SLC1A3P43003 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
SLC1A3P43003 AC000095.1-201ENST00000603208 874 ntBASIC14.14□□□□□ -0.15
SLC1A3P43003 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SLC1A3P43003 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A3P43003 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A3P43003 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A3P43003 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A3P43003 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A3P43003 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A3P43003 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A3P43003 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A3P43003 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A3P43003 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A3P43003 MIR600HG-201ENST00000449175 5984 ntBASIC14.14□□□□□ -0.15
SLC1A3P43003 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SLC1A3P43003 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SLC1A3P43003 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A3P43003 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.14□□□□□ -0.15
SLC1A3P43003 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SLC1A3P43003 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A3P43003 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.14□□□□□ -0.15
SLC1A3P43003 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A3P43003 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.13□□□□□ -0.15
SLC1A3P43003 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.13□□□□□ -0.15
SLC1A3P43003 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SLC1A3P43003 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.13□□□□□ -0.15
SLC1A3P43003 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.13□□□□□ -0.15
SLC1A3P43003 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLC1A3P43003 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC1A3P43003 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.13□□□□□ -0.15
SLC1A3P43003 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.13□□□□□ -0.15
SLC1A3P43003 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.13□□□□□ -0.15
SLC1A3P43003 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC1A3P43003 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLC1A3P43003 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.13□□□□□ -0.15
SLC1A3P43003 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.13□□□□□ -0.15
SLC1A3P43003 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLC1A3P43003 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLC1A3P43003 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.13□□□□□ -0.15
SLC1A3P43003 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLC1A3P43003 FAM8A3P-201ENST00000427218 844 ntBASIC14.13□□□□□ -0.15
SLC1A3P43003 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.13□□□□□ -0.15
SLC1A3P43003 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.13□□□□□ -0.15
SLC1A3P43003 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC1A3P43003 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.13□□□□□ -0.15
SLC1A3P43003 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLC1A3P43003 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.13□□□□□ -0.15
SLC1A3P43003 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.13□□□□□ -0.15
SLC1A3P43003 AC005498.2-205ENST00000593218 784 ntBASIC14.13□□□□□ -0.15
SLC1A3P43003 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.13□□□□□ -0.15
SLC1A3P43003 SRD5A3P1-201ENST00000603021 949 ntBASIC14.13□□□□□ -0.15
SLC1A3P43003 AC025181.2-201ENST00000606994 802 ntBASIC14.13□□□□□ -0.15
SLC1A3P43003 AC008738.7-201ENST00000609744 511 ntBASIC14.13□□□□□ -0.15
SLC1A3P43003 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.13□□□□□ -0.15
SLC1A3P43003 AL645728.2-202ENST00000641679 227 ntBASIC14.13□□□□□ -0.15
SLC1A3P43003 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC1A3P43003 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SLC1A3P43003 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC1A3P43003 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLC1A3P43003 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SLC1A3P43003 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.13□□□□□ -0.15
SLC1A3P43003 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.13□□□□□ -0.15
SLC1A3P43003 OR2I1P-209ENST00000641730 5365 ntBASIC14.13□□□□□ -0.15
SLC1A3P43003 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLC1A3P43003 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.13□□□□□ -0.15
SLC1A3P43003 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC1A3P43003 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC1A3P43003 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC1A3P43003 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC1A3P43003 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC1A3P43003 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC1A3P43003 CICP11-201ENST00000434745 2827 ntBASIC14.13□□□□□ -0.15
SLC1A3P43003 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLC1A3P43003 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.13□□□□□ -0.15
SLC1A3P43003 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A3P43003 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SLC1A3P43003 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A3P43003 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A3P43003 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A3P43003 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms