RNA–Protein interactions for RNA: ENST00000265343.9

AFF4-201, Transcript of AF4/FMR2 family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AFF4, Length 9,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-201ENST00000265343 PELP1Q8IZL8 1130 aaKnown RBP24.86■■□□□ 1.57
AFF4-201ENST00000265343 MYT1Q01538 1121 aa24.26■■□□□ 1.47
AFF4-201ENST00000265343 DCAF8L2P0C7V8 631 aa23.65■■□□□ 1.38
AFF4-201ENST00000265343 CCER1Q8TC90 406 aaPredicted RBP23.59■■□□□ 1.37
AFF4-201ENST00000265343 ERICH6Q7L0X2 663 aa23.43■■□□□ 1.34
AFF4-201ENST00000265343 CENPBP07199 599 aaPredicted RBP23.37■■□□□ 1.33
AFF4-201ENST00000265343 SUPT5HO00267 1087 aaKnown RBP23.12■■□□□ 1.29
AFF4-201ENST00000265343 ZEB1P37275 1124 aaPredicted RBP23.1■■□□□ 1.29
AFF4-201ENST00000265343 APLP2Q06481 763 aa22.94■■□□□ 1.26
AFF4-201ENST00000265343 YTHDC1Q96MU7 727 aaKnown RBP22.84■■□□□ 1.25
AFF4-201ENST00000265343 NEFLP07196 543 aa22.74■■□□□ 1.23
AFF4-201ENST00000265343 NISCHQ9Y2I1 1504 aa22.65■■□□□ 1.22
AFF4-201ENST00000265343 PCGF6Q9BYE7 350 aa22.59■■□□□ 1.21
AFF4-201ENST00000265343 TTBK1Q5TCY1 1321 aaPredicted RBP22.56■■□□□ 1.2
AFF4-201ENST00000265343 FAM9AQ8IZU1 332 aaPredicted RBP22.47■■□□□ 1.19
AFF4-201ENST00000265343 SHROOM4Q9ULL8 1493 aa22.36■■□□□ 1.17
AFF4-201ENST00000265343 DAXXQ9UER7 740 aaPredicted RBP22.3■■□□□ 1.16
AFF4-201ENST00000265343 EHMT2Q96KQ7 1210 aa22.23■■□□□ 1.15
AFF4-201ENST00000265343 RTL5Q5HYW3 569 aaPredicted RBP21.96■■□□□ 1.11
AFF4-201ENST00000265343 HRCP23327 699 aa21.75■■□□□ 1.07
AFF4-201ENST00000265343 TRIM26Q12899 539 aaPredicted RBP21.74■■□□□ 1.07
AFF4-201ENST00000265343 ZNF316A6NFI3 1004 aaPredicted RBP21.71■■□□□ 1.07
AFF4-201ENST00000265343 TRIM41Q8WV44 630 aa21.65■■□□□ 1.06
AFF4-201ENST00000265343 UBTFP17480 764 aaKnown RBP21.46■■□□□ 1.03
AFF4-201ENST00000265343 GLIPR1L2Q4G1C9 344 aa21.4■■□□□ 1.02
AFF4-201ENST00000265343 ATP1B4Q9UN42 357 aaPredicted RBP21.31■■□□□ 1
AFF4-201ENST00000265343 MYT1LQ9UL68 1186 aa21.29■■□□□ 1
AFF4-201ENST00000265343 CLSPNQ9HAW4 1339 aa21.27■■□□□ 1
AFF4-201ENST00000265343 DIEXFQ68CQ4 756 aaKnown RBP21.26■□□□□ 0.99
AFF4-201ENST00000265343 RANGAP1P46060 587 aaPredicted RBP21.23■□□□□ 0.99
AFF4-201ENST00000265343 CDK11AQ9UQ88 783 aaPredicted RBP21.18■□□□□ 0.98
AFF4-201ENST00000265343 GTF3C3Q9Y5Q9 886 aa21.01■□□□□ 0.95
AFF4-201ENST00000265343 ANP32AP39687 249 aaKnown RBP21■□□□□ 0.95
AFF4-201ENST00000265343 ANP32BQ92688 251 aaKnown RBP20.97■□□□□ 0.95
AFF4-201ENST00000265343 POLR3GLQ9BT43 218 aa20.92■□□□□ 0.94
AFF4-201ENST00000265343 ZBTB47Q9UFB7 747 aaPredicted RBP20.85■□□□□ 0.93
AFF4-201ENST00000265343 EIF5BO60841 1220 aaKnown RBP20.84■□□□□ 0.93
AFF4-201ENST00000265343 PPARGC1BQ86YN6 1023 aaKnown RBP20.8■□□□□ 0.92
AFF4-201ENST00000265343 ANP32CO43423 234 aa20.78■□□□□ 0.92
AFF4-201ENST00000265343 ACIN1Q9UKV3 1341 aaKnown RBP20.74■□□□□ 0.91
AFF4-201ENST00000265343 HNRNPUL2Q1KMD3 747 aaKnown RBP20.68■□□□□ 0.9
AFF4-201ENST00000265343 ITGAEP38570 1179 aa20.67■□□□□ 0.9
AFF4-201ENST00000265343 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.63■□□□□ 0.89
AFF4-201ENST00000265343 BCANQ96GW7 911 aa20.63■□□□□ 0.89
AFF4-201ENST00000265343 SLC4A1APQ9BWU0 796 aaKnown RBP20.56■□□□□ 0.88
AFF4-201ENST00000265343 UPF2Q9HAU5 1272 aaKnown RBP20.55■□□□□ 0.88
AFF4-201ENST00000265343 CANXP27824 592 aaKnown RBP20.54■□□□□ 0.88
AFF4-201ENST00000265343 TNNT2P45379 298 aaPredicted RBP20.49■□□□□ 0.87
AFF4-201ENST00000265343 HSP90AA1P07900 732 aaKnown RBP20.48■□□□□ 0.87
AFF4-201ENST00000265343 CHIC1Q5VXU3 224 aa20.47■□□□□ 0.87
AFF4-201ENST00000265343 CNGB1Q14028 1251 aaPredicted RBP20.46■□□□□ 0.87
AFF4-201ENST00000265343 NEFMP07197 916 aa20.42■□□□□ 0.86
AFF4-201ENST00000265343 LOC105371045A0A1W2PR82 267 aa20.41■□□□□ 0.86
AFF4-201ENST00000265343 ANP32EQ9BTT0 268 aa20.38■□□□□ 0.85
AFF4-201ENST00000265343 NPM2Q86SE8 214 aaKnown RBP20.29■□□□□ 0.84
AFF4-201ENST00000265343 FAM50AQ14320 339 aaKnown RBP20.27■□□□□ 0.83
AFF4-201ENST00000265343 NEUROD1Q13562 356 aa20.2■□□□□ 0.82
AFF4-201ENST00000265343 TRIM44Q96DX7 344 aaPredicted RBP20.2■□□□□ 0.82
AFF4-201ENST00000265343 TRIM52Q96A61 297 aa20.19■□□□□ 0.82
AFF4-201ENST00000265343 FKBP8Q14318 412 aa20.18■□□□□ 0.82
AFF4-201ENST00000265343 DCAF1Q9Y4B6 1507 aa20.17■□□□□ 0.82
AFF4-201ENST00000265343 NBR1Q14596 966 aa20.17■□□□□ 0.82
AFF4-201ENST00000265343 DDRGK1Q96HY6 314 aa20.15■□□□□ 0.82
AFF4-201ENST00000265343 ERICH6BQ5W0A0 696 aa20.13■□□□□ 0.81
AFF4-201ENST00000265343 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.1■□□□□ 0.81
AFF4-201ENST00000265343 BECN1Q14457 450 aa20.09■□□□□ 0.81
AFF4-201ENST00000265343 NCLP19338 710 aaKnown RBP20.09■□□□□ 0.81
AFF4-201ENST00000265343 CCDC180Q9P1Z9 1646 aa20.07■□□□□ 0.8
AFF4-201ENST00000265343 CCDC136Q96JN2 1154 aa20.06■□□□□ 0.8
AFF4-201ENST00000265343 CDK11BP21127 795 aaKnown RBP20.03■□□□□ 0.8
AFF4-201ENST00000265343 GOLGA6L22H0YM25 854 aa20.01■□□□□ 0.79
AFF4-201ENST00000265343 ZNF326Q5BKZ1 582 aaKnown RBP19.98■□□□□ 0.79
AFF4-201ENST00000265343 HNRNPUQ00839 825 aaKnown RBP eCLIP19.95■□□□□ 0.78
AFF4-201ENST00000265343 TONSLQ96HA7 1378 aa19.92■□□□□ 0.78
AFF4-201ENST00000265343 SCAF1Q9H7N4 1312 aaKnown RBP19.9■□□□□ 0.78
AFF4-201ENST00000265343 SLC24A1O60721 1099 aa19.9■□□□□ 0.78
AFF4-201ENST00000265343 PPM1GO15355 546 aaPredicted RBP19.87■□□□□ 0.77
AFF4-201ENST00000265343 BCL11AQ9H165 835 aa19.87■□□□□ 0.77
AFF4-201ENST00000265343 MYH16Q9H6N6 1097 aa19.83■□□□□ 0.77
AFF4-201ENST00000265343 ARXQ96QS3 562 aa19.82■□□□□ 0.76
AFF4-201ENST00000265343 NAP1L5Q96NT1 182 aaPredicted RBP19.79■□□□□ 0.76
AFF4-201ENST00000265343 DNTTIP2Q5QJE6 756 aaKnown RBP19.77■□□□□ 0.76
AFF4-201ENST00000265343 PTMAP06454 111 aaKnown RBP19.77■□□□□ 0.75
AFF4-201ENST00000265343 TMC1Q8TDI8 760 aa19.74■□□□□ 0.75
AFF4-201ENST00000265343 CHAF1AQ13111 956 aaPredicted RBP19.73■□□□□ 0.75
AFF4-201ENST00000265343 ZRSR1Q15695 479 aaKnown RBP19.73■□□□□ 0.75
AFF4-201ENST00000265343 GOLGA6L6A8MZA4 724 aa19.72■□□□□ 0.75
AFF4-201ENST00000265343 NRDCO43847 1150 aa19.68■□□□□ 0.74
AFF4-201ENST00000265343 FAM9BQ8IZU0 186 aa19.67■□□□□ 0.74
AFF4-201ENST00000265343 CASC1Q6TDU7 716 aa19.66■□□□□ 0.74
AFF4-201ENST00000265343 WDR43Q15061 677 aaKnown RBP eCLIP19.65■□□□□ 0.74
AFF4-201ENST00000265343 L1TD1Q5T7N2 865 aaKnown RBP19.64■□□□□ 0.73
AFF4-201ENST00000265343 NOP58Q9Y2X3 529 aaKnown RBP19.63■□□□□ 0.73
AFF4-201ENST00000265343 DDX10Q13206 875 aaKnown RBP19.59■□□□□ 0.73
AFF4-201ENST00000265343 MRS2Q9HD23 443 aa19.57■□□□□ 0.72
AFF4-201ENST00000265343 MSNP26038 577 aaKnown RBP19.55■□□□□ 0.72
AFF4-201ENST00000265343 PTMSP20962 102 aa19.51■□□□□ 0.71
AFF4-201ENST00000265343 MIER1Q8N108 512 aa19.44■□□□□ 0.7
AFF4-201ENST00000265343 CHMP4BQ9H444 224 aaKnown RBP19.44■□□□□ 0.7
AFF4-201ENST00000265343 PPP4R2Q9NY27 417 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms