Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 MAGI1-205ENST00000464060 2247 ntTSL 1 (best)27.33■■□□□ 1.972e-7■■□□□ 14.1
U2AF2P26368 PUS1-206ENST00000537484 642 ntTSL 322.26■■□□□ 1.151e-7■■□□□ 14.1
U2AF2P26368 PUS1-201ENST00000322060 1206 ntAPPRIS ALT2 TSL 520.39■□□□□ 0.851e-7■■□□□ 14.1
U2AF2P26368 COASY-213ENST00000591753 2225 ntTSL 1 (best)20.04■□□□□ 0.85e-11■■□□□ 14.1
U2AF2P26368 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC16.64■□□□□ 0.255e-11■■□□□ 14.1
U2AF2P26368 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.135e-11■■□□□ 14.1
U2AF2P26368 COASY-201ENST00000393818 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.055e-11■■□□□ 14.1
U2AF2P26368 NUBPL-204ENST00000548937 578 ntTSL 319.08■□□□□ 0.641e-6■■□□□ 14.1
U2AF2P26368 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.998e-7■■□□□ 14.1
U2AF2P26368 MFN1-202ENST00000357390 3148 ntTSL 27.69□□□□□ -1.188e-7■■□□□ 14.1
U2AF2P26368 MFN1-206ENST00000474903 1919 ntTSL 1 (best)6.59□□□□□ -1.358e-7■■□□□ 14.1
U2AF2P26368 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.728e-7■■□□□ 14.1
U2AF2P26368 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.782e-10■■□□□ 14.1
U2AF2P26368 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.832e-10■■□□□ 14.1
U2AF2P26368 U2AF2-208ENST00000592874 849 ntTSL 518■□□□□ 0.472e-8■■□□□ 14.1
U2AF2P26368 PUM1-211ENST00000498419 3068 ntTSL 57.8□□□□□ -1.166e-7■■□□□ 14.1
U2AF2P26368 GPCPD1-207ENST00000633552 571 ntTSL 52.61□□□□□ -1.996e-8■■□□□ 14.1
U2AF2P26368 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.331e-6■■□□□ 14.1
U2AF2P26368 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC16.99■□□□□ 0.312e-7■■□□□ 14.1
U2AF2P26368 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC15.79■□□□□ 0.122e-7■■□□□ 14.1
U2AF2P26368 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.092e-7■■□□□ 14.1
U2AF2P26368 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC15.58■□□□□ 0.082e-7■■□□□ 14.1
U2AF2P26368 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC14.96□□□□□ -0.012e-7■■□□□ 14.1
U2AF2P26368 DNMT3B-201ENST00000201963 4255 ntTSL 1 (best) BASIC13.53□□□□□ -0.242e-7■■□□□ 14.1
U2AF2P26368 ASGR1-206ENST00000573596 2083 ntTSL 520.91■□□□□ 0.948e-13■■□□□ 14.1
U2AF2P26368 ASGR1-205ENST00000573083 855 ntTSL 311.21□□□□□ -0.618e-13■■□□□ 14.1
U2AF2P26368 PABPC1L-215ENST00000489068 442 ntTSL 312.77□□□□□ -0.371e-10■■□□□ 14.1
U2AF2P26368 TCF12-222ENST00000561152 675 ntTSL 529.08■■■□□ 2.252e-6■■□□□ 14.1
U2AF2P26368 ARID1A-215ENST00000636958 1388 ntTSL 516.96■□□□□ 0.312e-6■■□□□ 14.1
U2AF2P26368 PTPRK-217ENST00000524534 2441 ntTSL 513.56□□□□□ -0.241e-6■■□□□ 14.1
U2AF2P26368 PTPRK-216ENST00000524481 3157 ntTSL 213.45□□□□□ -0.261e-6■■□□□ 14.1
U2AF2P26368 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.8■□□□□ 0.921e-6■■□□□ 14.1
U2AF2P26368 CADM1-221ENST00000612235 1042 ntTSL 5 BASIC13.36□□□□□ -0.271e-6■■□□□ 14.1
U2AF2P26368 MARCH3-204ENST00000506088 814 ntTSL 218.88■□□□□ 0.611e-6■■□□□ 14
U2AF2P26368 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -01e-6■■□□□ 14
U2AF2P26368 MATR3-202ENST00000502422 2250 ntTSL 1 (best)5.31□□□□□ -1.569e-7■■□□□ 14
U2AF2P26368 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC18.31■□□□□ 0.523e-7■■□□□ 14
U2AF2P26368 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC14.63□□□□□ -0.076e-8■■□□□ 14
U2AF2P26368 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.236e-8■■□□□ 14
U2AF2P26368 DNAJB6-208ENST00000441561 1022 ntTSL 518.19■□□□□ 0.55e-7■■□□□ 14
U2AF2P26368 DNAJB6-207ENST00000441291 614 ntTSL 312.87□□□□□ -0.355e-7■■□□□ 14
U2AF2P26368 DNAJB6-202ENST00000412557 506 ntTSL 312.59□□□□□ -0.395e-7■■□□□ 14
U2AF2P26368 NDUFA10-210ENST00000471378 582 ntTSL 311.14□□□□□ -0.631e-7■■□□□ 14
U2AF2P26368 ATPAF2-212ENST00000584205 1298 ntTSL 222.04■■□□□ 1.122e-6■■□□□ 14
U2AF2P26368 ATPAF2-202ENST00000462733 1737 ntTSL 1 (best)20.42■□□□□ 0.862e-6■■□□□ 14
U2AF2P26368 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.6■□□□□ 0.732e-6■■□□□ 14
U2AF2P26368 SETDB2-203ENST00000354234 6139 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.33e-6■■□□□ 14
U2AF2P26368 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC7.54□□□□□ -1.23e-6■■□□□ 14
U2AF2P26368 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.313e-6■■□□□ 14
U2AF2P26368 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.753e-6■■□□□ 14
U2AF2P26368 DST-211ENST00000466429 2016 ntTSL 28.78□□□□□ -19e-7■■□□□ 14
U2AF2P26368 SLC25A13-202ENST00000416240 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.022e-6■■□□□ 14
U2AF2P26368 SLC25A13-201ENST00000265631 3136 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.712e-6■■□□□ 14
U2AF2P26368 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.492e-8■■□□□ 14
U2AF2P26368 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC17.78■□□□□ 0.442e-8■■□□□ 14
U2AF2P26368 SNIP1-202ENST00000468040 931 ntTSL 517.36■□□□□ 0.372e-8■■□□□ 14
U2AF2P26368 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC16.73■□□□□ 0.272e-8■■□□□ 14
U2AF2P26368 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.144e-6■■□□□ 14
U2AF2P26368 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.064e-6■■□□□ 14
U2AF2P26368 SGK1-226ENST00000531782 580 ntTSL 215.2■□□□□ 0.022e-8■■□□□ 14
U2AF2P26368 MTCH1-205ENST00000471737 629 ntTSL 215□□□□□ -0.017e-16■■□□□ 14
U2AF2P26368 STIP1-204ENST00000536973 738 ntTSL 515□□□□□ -0.012e-8■■□□□ 14
U2AF2P26368 SNIP1-201ENST00000296215 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.132e-8■■□□□ 14
U2AF2P26368 SGK1-209ENST00000473704 572 ntTSL 213.86□□□□□ -0.192e-8■■□□□ 14
U2AF2P26368 SNIP1-204ENST00000638725 2761 ntTSL 212.91□□□□□ -0.342e-8■■□□□ 14
U2AF2P26368 MTCH1-203ENST00000418541 602 ntTSL 39.69□□□□□ -0.867e-16■■□□□ 14
U2AF2P26368 SLC25A36-209ENST00000511757 1307 ntTSL 27.88□□□□□ -1.152e-8■■□□□ 14
U2AF2P26368 SLC25A36-213ENST00000514629 544 ntTSL 26.85□□□□□ -1.312e-8■■□□□ 14
U2AF2P26368 SLC25A36-207ENST00000502866 598 ntTSL 46.69□□□□□ -1.342e-8■■□□□ 14
U2AF2P26368 STIP1-206ENST00000538497 582 ntTSL 26.56□□□□□ -1.362e-8■■□□□ 14
U2AF2P26368 GAPVD1-216ENST00000474637 2545 ntTSL 24.74□□□□□ -1.652e-8■■□□□ 14
U2AF2P26368 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.654e-7■■□□□ 14
U2AF2P26368 CCNI-205ENST00000507788 595 ntTSL 419.08■□□□□ 0.641e-13■■□□□ 14
U2AF2P26368 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.014e-7■■□□□ 14
U2AF2P26368 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC8.32□□□□□ -1.084e-7■■□□□ 14
U2AF2P26368 DHX36-210ENST00000481941 2612 ntTSL 24.99□□□□□ -1.618e-8■■□□□ 14
U2AF2P26368 ATP1B3-206ENST00000482635 569 ntTSL 55.58□□□□□ -1.529e-7■■□□□ 14
U2AF2P26368 ATP1B3-209ENST00000487199 421 ntTSL 31.81□□□□□ -2.129e-7■■□□□ 14
U2AF2P26368 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.175e-7■■□□□ 14
U2AF2P26368 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC27.91■■■□□ 2.062e-6■■□□□ 14
U2AF2P26368 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.62e-6■■□□□ 14
U2AF2P26368 RFWD2-203ENST00000367667 2034 ntTSL 1 (best)12.2□□□□□ -0.462e-6■■□□□ 14
U2AF2P26368 RFWD2-202ENST00000367666 2022 ntTSL 27.05□□□□□ -1.282e-6■■□□□ 14
U2AF2P26368 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.542e-7■■□□□ 14
U2AF2P26368 ACADVL-234ENST00000583760 599 ntTSL 212.06□□□□□ -0.482e-24■■□□□ 14
U2AF2P26368 TNRC6A-203ENST00000450465 3700 ntTSL 29.87□□□□□ -0.837e-7■■□□□ 14
U2AF2P26368 RALGAPB-205ENST00000461147 5050 ntTSL 1 (best)4.04□□□□□ -1.762e-6■■□□□ 14
U2AF2P26368 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.96e-7■■□□□ 14
U2AF2P26368 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.986e-7■■□□□ 14
U2AF2P26368 UBAP2-208ENST00000459988 2628 ntTSL 27.49□□□□□ -1.212e-8■■□□□ 14
U2AF2P26368 UBAP2-210ENST00000480885 4572 ntTSL 23.45□□□□□ -1.862e-8■■□□□ 14
U2AF2P26368 COBLL1-223ENST00000495084 472 ntTSL 35.87□□□□□ -1.472e-6■■□□□ 14
U2AF2P26368 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.032e-8■■□□□ 14
U2AF2P26368 LATS1-206ENST00000542747 3284 ntTSL 57.26□□□□□ -1.252e-8■■□□□ 14
U2AF2P26368 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.772e-8■■□□□ 14
U2AF2P26368 LATS1-203ENST00000441107 3879 ntTSL 1 (best)3.58□□□□□ -1.842e-8■■□□□ 14
U2AF2P26368 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.695e-7■■□□□ 14
U2AF2P26368 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.695e-7■■□□□ 14
U2AF2P26368 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.695e-7■■□□□ 14
U2AF2P26368 ITPR2-209ENST00000545235 540 ntTSL 1 (best)9.03□□□□□ -0.967e-7■■□□□ 14
Retrieved 100 of 36,523 protein–RNA pairs in 294.4 ms