RNA–Protein interactions for RNA: ENST00000443239.7

DNMT3B-205, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 2 BASIC

Gene DNMT3B, Length 2,674 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-205ENST00000443239 NISCHQ9Y2I1 1504 aa26.35■■□□□ 1.81
DNMT3B-205ENST00000443239 SHROOM4Q9ULL8 1493 aa22.69■■□□□ 1.22
DNMT3B-205ENST00000443239 CCDC180Q9P1Z9 1646 aa22.57■■□□□ 1.2
DNMT3B-205ENST00000443239 SUPT5HO00267 1087 aaKnown RBP22.46■■□□□ 1.19
DNMT3B-205ENST00000443239 ZCCHC6Q5VYS8 1495 aaKnown RBP22.21■■□□□ 1.15
DNMT3B-205ENST00000443239 DCAF8L2P0C7V8 631 aa21.93■■□□□ 1.1
DNMT3B-205ENST00000443239 HRCP23327 699 aa21.87■■□□□ 1.09
DNMT3B-205ENST00000443239 CHIC1Q5VXU3 224 aa21.86■■□□□ 1.09
DNMT3B-205ENST00000443239 MYO15BQ96JP2 1530 aa21.83■■□□□ 1.09
DNMT3B-205ENST00000443239 PCGF6Q9BYE7 350 aa21.73■■□□□ 1.07
DNMT3B-205ENST00000443239 DCAF1Q9Y4B6 1507 aa21.62■■□□□ 1.05
DNMT3B-205ENST00000443239 PPARGC1BQ86YN6 1023 aaKnown RBP21.47■■□□□ 1.03
DNMT3B-205ENST00000443239 LOC105371045A0A1W2PR82 267 aa21.35■■□□□ 1.01
DNMT3B-205ENST00000443239 ABCC9O60706 1549 aa21.24■□□□□ 0.99
DNMT3B-205ENST00000443239 TRIM26Q12899 539 aaPredicted RBP21.11■□□□□ 0.97
DNMT3B-205ENST00000443239 SCRIBQ14160 1630 aa21.1■□□□□ 0.97
DNMT3B-205ENST00000443239 NACADO15069 1562 aa20.96■□□□□ 0.95
DNMT3B-205ENST00000443239 TRIM41Q8WV44 630 aa20.82■□□□□ 0.92
DNMT3B-205ENST00000443239 ZEB1P37275 1124 aaPredicted RBP20.79■□□□□ 0.92
DNMT3B-205ENST00000443239 FAM9AQ8IZU1 332 aaPredicted RBP20.78■□□□□ 0.92
DNMT3B-205ENST00000443239 EHMT2Q96KQ7 1210 aa20.71■□□□□ 0.91
DNMT3B-205ENST00000443239 RSF1Q96T23 1441 aaPredicted RBP20.71■□□□□ 0.91
DNMT3B-205ENST00000443239 RB1CC1Q8TDY2 1594 aa20.69■□□□□ 0.9
DNMT3B-205ENST00000443239 CECR2Q9BXF3 1484 aa20.59■□□□□ 0.89
DNMT3B-205ENST00000443239 MROH2BQ7Z745 1585 aa20.47■□□□□ 0.87
DNMT3B-205ENST00000443239 SCAF1Q9H7N4 1312 aaKnown RBP20.43■□□□□ 0.86
DNMT3B-205ENST00000443239 PELP1Q8IZL8 1130 aaKnown RBP20.42■□□□□ 0.86
DNMT3B-205ENST00000443239 UNC13AQ9UPW8 1703 aa20.38■□□□□ 0.85
DNMT3B-205ENST00000443239 WIZO95785 1651 aa20.33■□□□□ 0.85
DNMT3B-205ENST00000443239 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.29■□□□□ 0.84
DNMT3B-205ENST00000443239 CCER1Q8TC90 406 aaPredicted RBP20.27■□□□□ 0.84
DNMT3B-205ENST00000443239 BAZ1AQ9NRL2 1556 aaPredicted RBP20.25■□□□□ 0.83
DNMT3B-205ENST00000443239 PABPN1Q86U42 306 aaKnown RBP eCLIP20.24■□□□□ 0.83
DNMT3B-205ENST00000443239 BICRAQ9NZM4 1560 aa20.17■□□□□ 0.82
DNMT3B-205ENST00000443239 SMARCA4P51532 1647 aa20.14■□□□□ 0.81
DNMT3B-205ENST00000443239 TTBK1Q5TCY1 1321 aaPredicted RBP20.12■□□□□ 0.81
DNMT3B-205ENST00000443239 ACIN1Q9UKV3 1341 aaKnown RBP20.09■□□□□ 0.81
DNMT3B-205ENST00000443239 NEUROD1Q13562 356 aa20.07■□□□□ 0.8
DNMT3B-205ENST00000443239 DIEXFQ68CQ4 756 aaKnown RBP20.04■□□□□ 0.8
DNMT3B-205ENST00000443239 TOP2AP11388 1531 aaKnown RBP20■□□□□ 0.79
DNMT3B-205ENST00000443239 CENPBP07199 599 aaPredicted RBP19.97■□□□□ 0.79
DNMT3B-205ENST00000443239 GTF3C3Q9Y5Q9 886 aa19.94■□□□□ 0.78
DNMT3B-205ENST00000443239 CCDC88BA6NC98 1476 aa19.92■□□□□ 0.78
DNMT3B-205ENST00000443239 EIF4G1Q04637 1599 aaKnown RBP19.9■□□□□ 0.78
DNMT3B-205ENST00000443239 SMARCA2P51531 1590 aa19.89■□□□□ 0.77
DNMT3B-205ENST00000443239 ABCC8Q09428 1581 aa19.87■□□□□ 0.77
DNMT3B-205ENST00000443239 CEP162Q5TB80 1403 aa19.87■□□□□ 0.77
DNMT3B-205ENST00000443239 WRNQ14191 1432 aaPredicted RBP eCLIP19.84■□□□□ 0.77
DNMT3B-205ENST00000443239 UBTFP17480 764 aaKnown RBP19.82■□□□□ 0.76
DNMT3B-205ENST00000443239 SOGA1O94964 1423 aa19.79■□□□□ 0.76
DNMT3B-205ENST00000443239 PEG3Q9GZU2 1588 aa19.77■□□□□ 0.76
DNMT3B-205ENST00000443239 TNIKQ9UKE5 1360 aa19.76■□□□□ 0.75
DNMT3B-205ENST00000443239 ZNF316A6NFI3 1004 aaPredicted RBP19.75■□□□□ 0.75
DNMT3B-205ENST00000443239 CSRNP3Q8WYN3 585 aa19.75■□□□□ 0.75
DNMT3B-205ENST00000443239 ATAD2BQ9ULI0 1458 aa19.73■□□□□ 0.75
DNMT3B-205ENST00000443239 YTHDC1Q96MU7 727 aaKnown RBP19.72■□□□□ 0.75
DNMT3B-205ENST00000443239 RUSC2Q8N2Y8 1516 aa19.66■□□□□ 0.74
DNMT3B-205ENST00000443239 HNRNPUL2Q1KMD3 747 aaKnown RBP19.64■□□□□ 0.73
DNMT3B-205ENST00000443239 BAZ1BQ9UIG0 1483 aaKnown RBP19.64■□□□□ 0.73
DNMT3B-205ENST00000443239 EEA1Q15075 1411 aa19.63■□□□□ 0.73
DNMT3B-205ENST00000443239 GOLGA3Q08378 1498 aa19.58■□□□□ 0.72
DNMT3B-205ENST00000443239 MIER1Q8N108 512 aa19.55■□□□□ 0.72
DNMT3B-205ENST00000443239 MYT1Q01538 1121 aa19.48■□□□□ 0.71
DNMT3B-205ENST00000443239 APLP2Q06481 763 aa19.48■□□□□ 0.71
DNMT3B-205ENST00000443239 RANGAP1P46060 587 aaPredicted RBP19.47■□□□□ 0.71
DNMT3B-205ENST00000443239 CLIP1P30622 1438 aa19.43■□□□□ 0.7
DNMT3B-205ENST00000443239 CEP164Q9UPV0 1460 aa19.42■□□□□ 0.7
DNMT3B-205ENST00000443239 NCAPD3P42695 1498 aa19.41■□□□□ 0.7
DNMT3B-205ENST00000443239 SYNJ1O43426 1573 aa19.38■□□□□ 0.69
DNMT3B-205ENST00000443239 HMGXB3Q12766 1538 aa19.36■□□□□ 0.69
DNMT3B-205ENST00000443239 VPS8Q8N3P4 1428 aa19.34■□□□□ 0.69
DNMT3B-205ENST00000443239 KIF21BO75037 1637 aa19.29■□□□□ 0.68
DNMT3B-205ENST00000443239 RAPGEF2Q9Y4G8 1499 aa19.26■□□□□ 0.67
DNMT3B-205ENST00000443239 TOP2BQ02880 1626 aa19.17■□□□□ 0.66
DNMT3B-205ENST00000443239 CFTRP13569 1480 aa19.15■□□□□ 0.66
DNMT3B-205ENST00000443239 DHX57Q6P158 1386 aaKnown RBP19.13■□□□□ 0.65
DNMT3B-205ENST00000443239 CLSPNQ9HAW4 1339 aa19.13■□□□□ 0.65
DNMT3B-205ENST00000443239 CC2D2AQ9P2K1 1620 aa19.12■□□□□ 0.65
DNMT3B-205ENST00000443239 BIVM-ERCC5R4GMW8 1640 aa19.1■□□□□ 0.65
DNMT3B-205ENST00000443239 KANK4Q5T7N3 995 aaPredicted RBP19.09■□□□□ 0.65
DNMT3B-205ENST00000443239 CUX1P39880 1505 aa19.08■□□□□ 0.65
DNMT3B-205ENST00000443239 SUPT16HQ9Y5B9 1047 aaKnown RBP19.06■□□□□ 0.64
DNMT3B-205ENST00000443239 ITGAEP38570 1179 aa19.02■□□□□ 0.64
DNMT3B-205ENST00000443239 CADPSQ9ULU8 1353 aa19■□□□□ 0.63
DNMT3B-205ENST00000443239 ARAP1Q96P48 1450 aa18.99■□□□□ 0.63
DNMT3B-205ENST00000443239 PRXQ9BXM0 1461 aa18.94■□□□□ 0.62
DNMT3B-205ENST00000443239 PRDM2Q13029 1718 aa18.94■□□□□ 0.62
DNMT3B-205ENST00000443239 ERICH3Q5RHP9 1530 aa18.92■□□□□ 0.62
DNMT3B-205ENST00000443239 RRBP1Q9P2E9 1410 aaKnown RBP18.91■□□□□ 0.62
DNMT3B-205ENST00000443239 CCNB3Q8WWL7 1395 aa18.9■□□□□ 0.62
DNMT3B-205ENST00000443239 KIF27Q86VH2 1401 aa18.88■□□□□ 0.61
DNMT3B-205ENST00000443239 KCNH8Q96L42 1107 aa18.87■□□□□ 0.61
DNMT3B-205ENST00000443239 TSHZ2Q9NRE2 1034 aa18.84■□□□□ 0.61
DNMT3B-205ENST00000443239 NESP48681 1621 aa18.83■□□□□ 0.6
DNMT3B-205ENST00000443239 FANCD2Q9BXW9 1451 aa18.82■□□□□ 0.6
DNMT3B-205ENST00000443239 RAB3GAP2Q9H2M9 1393 aa18.81■□□□□ 0.6
DNMT3B-205ENST00000443239 DNAJC5BQ9UF47 199 aa18.8■□□□□ 0.6
DNMT3B-205ENST00000443239 CUX2O14529 1486 aa18.8■□□□□ 0.6
DNMT3B-205ENST00000443239 FGD5Q6ZNL6 1462 aa18.8■□□□□ 0.6
DNMT3B-205ENST00000443239 BCANQ96GW7 911 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms