RNA–Protein interactions for RNA: ENST00000443239.7

DNMT3B-205, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 2 BASIC

Gene DNMT3B, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-205ENST00000443239 NISCHQ9Y2I1 1504 aa26.35■■□□□ 1.81
DNMT3B-205ENST00000443239 SHROOM4Q9ULL8 1493 aa22.69■■□□□ 1.22
DNMT3B-205ENST00000443239 CCDC180Q9P1Z9 1646 aa22.57■■□□□ 1.2
DNMT3B-205ENST00000443239 SUPT5HO00267 1087 aaKnown RBP22.46■■□□□ 1.19
DNMT3B-205ENST00000443239 ZCCHC6Q5VYS8 1495 aaKnown RBP22.21■■□□□ 1.15
DNMT3B-205ENST00000443239 DCAF8L2P0C7V8 631 aa21.93■■□□□ 1.1
DNMT3B-205ENST00000443239 HRCP23327 699 aa21.87■■□□□ 1.09
DNMT3B-205ENST00000443239 CHIC1Q5VXU3 224 aa21.86■■□□□ 1.09
DNMT3B-205ENST00000443239 MYO15BQ96JP2 1530 aa21.83■■□□□ 1.09
DNMT3B-205ENST00000443239 PCGF6Q9BYE7 350 aa21.73■■□□□ 1.07
DNMT3B-205ENST00000443239 DCAF1Q9Y4B6 1507 aa21.62■■□□□ 1.05
DNMT3B-205ENST00000443239 PPARGC1BQ86YN6 1023 aaKnown RBP21.47■■□□□ 1.03
DNMT3B-205ENST00000443239 LOC105371045A0A1W2PR82 267 aa21.35■■□□□ 1.01
DNMT3B-205ENST00000443239 ABCC9O60706 1549 aa21.24■□□□□ 0.99
DNMT3B-205ENST00000443239 TRIM26Q12899 539 aaPredicted RBP21.11■□□□□ 0.97
DNMT3B-205ENST00000443239 SCRIBQ14160 1630 aa21.1■□□□□ 0.97
DNMT3B-205ENST00000443239 NACADO15069 1562 aa20.96■□□□□ 0.95
DNMT3B-205ENST00000443239 TRIM41Q8WV44 630 aa20.82■□□□□ 0.92
DNMT3B-205ENST00000443239 ZEB1P37275 1124 aaPredicted RBP20.79■□□□□ 0.92
DNMT3B-205ENST00000443239 FAM9AQ8IZU1 332 aaPredicted RBP20.78■□□□□ 0.92
DNMT3B-205ENST00000443239 EHMT2Q96KQ7 1210 aa20.71■□□□□ 0.91
DNMT3B-205ENST00000443239 RSF1Q96T23 1441 aaPredicted RBP20.71■□□□□ 0.91
DNMT3B-205ENST00000443239 RB1CC1Q8TDY2 1594 aa20.69■□□□□ 0.9
DNMT3B-205ENST00000443239 CECR2Q9BXF3 1484 aa20.59■□□□□ 0.89
DNMT3B-205ENST00000443239 MROH2BQ7Z745 1585 aa20.47■□□□□ 0.87
DNMT3B-205ENST00000443239 SCAF1Q9H7N4 1312 aaKnown RBP20.43■□□□□ 0.86
DNMT3B-205ENST00000443239 PELP1Q8IZL8 1130 aaKnown RBP20.42■□□□□ 0.86
DNMT3B-205ENST00000443239 UNC13AQ9UPW8 1703 aa20.38■□□□□ 0.85
DNMT3B-205ENST00000443239 WIZO95785 1651 aa20.33■□□□□ 0.85
DNMT3B-205ENST00000443239 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.29■□□□□ 0.84
DNMT3B-205ENST00000443239 CCER1Q8TC90 406 aaPredicted RBP20.27■□□□□ 0.84
DNMT3B-205ENST00000443239 BAZ1AQ9NRL2 1556 aaPredicted RBP20.25■□□□□ 0.83
DNMT3B-205ENST00000443239 PABPN1Q86U42 306 aaKnown RBP eCLIP20.24■□□□□ 0.83
DNMT3B-205ENST00000443239 BICRAQ9NZM4 1560 aa20.17■□□□□ 0.82
DNMT3B-205ENST00000443239 SMARCA4P51532 1647 aa20.14■□□□□ 0.81
DNMT3B-205ENST00000443239 TTBK1Q5TCY1 1321 aaPredicted RBP20.12■□□□□ 0.81
DNMT3B-205ENST00000443239 ACIN1Q9UKV3 1341 aaKnown RBP20.09■□□□□ 0.81
DNMT3B-205ENST00000443239 NEUROD1Q13562 356 aa20.07■□□□□ 0.8
DNMT3B-205ENST00000443239 DIEXFQ68CQ4 756 aaKnown RBP20.04■□□□□ 0.8
DNMT3B-205ENST00000443239 TOP2AP11388 1531 aaKnown RBP20■□□□□ 0.79
DNMT3B-205ENST00000443239 CENPBP07199 599 aaPredicted RBP19.97■□□□□ 0.79
DNMT3B-205ENST00000443239 GTF3C3Q9Y5Q9 886 aa19.94■□□□□ 0.78
DNMT3B-205ENST00000443239 CCDC88BA6NC98 1476 aa19.92■□□□□ 0.78
DNMT3B-205ENST00000443239 EIF4G1Q04637 1599 aaKnown RBP19.9■□□□□ 0.78
DNMT3B-205ENST00000443239 SMARCA2P51531 1590 aa19.89■□□□□ 0.77
DNMT3B-205ENST00000443239 ABCC8Q09428 1581 aa19.87■□□□□ 0.77
DNMT3B-205ENST00000443239 CEP162Q5TB80 1403 aa19.87■□□□□ 0.77
DNMT3B-205ENST00000443239 WRNQ14191 1432 aaPredicted RBP eCLIP19.84■□□□□ 0.77
DNMT3B-205ENST00000443239 UBTFP17480 764 aaKnown RBP19.82■□□□□ 0.76
DNMT3B-205ENST00000443239 SOGA1O94964 1423 aa19.79■□□□□ 0.76
DNMT3B-205ENST00000443239 PEG3Q9GZU2 1588 aa19.77■□□□□ 0.76
DNMT3B-205ENST00000443239 TNIKQ9UKE5 1360 aa19.76■□□□□ 0.75
DNMT3B-205ENST00000443239 ZNF316A6NFI3 1004 aaPredicted RBP19.75■□□□□ 0.75
DNMT3B-205ENST00000443239 CSRNP3Q8WYN3 585 aa19.75■□□□□ 0.75
DNMT3B-205ENST00000443239 ATAD2BQ9ULI0 1458 aa19.73■□□□□ 0.75
DNMT3B-205ENST00000443239 YTHDC1Q96MU7 727 aaKnown RBP19.72■□□□□ 0.75
DNMT3B-205ENST00000443239 RUSC2Q8N2Y8 1516 aa19.66■□□□□ 0.74
DNMT3B-205ENST00000443239 HNRNPUL2Q1KMD3 747 aaKnown RBP19.64■□□□□ 0.73
DNMT3B-205ENST00000443239 BAZ1BQ9UIG0 1483 aaKnown RBP19.64■□□□□ 0.73
DNMT3B-205ENST00000443239 EEA1Q15075 1411 aa19.63■□□□□ 0.73
DNMT3B-205ENST00000443239 GOLGA3Q08378 1498 aa19.58■□□□□ 0.72
DNMT3B-205ENST00000443239 MIER1Q8N108 512 aa19.55■□□□□ 0.72
DNMT3B-205ENST00000443239 MYT1Q01538 1121 aa19.48■□□□□ 0.71
DNMT3B-205ENST00000443239 APLP2Q06481 763 aa19.48■□□□□ 0.71
DNMT3B-205ENST00000443239 RANGAP1P46060 587 aaPredicted RBP19.47■□□□□ 0.71
DNMT3B-205ENST00000443239 CLIP1P30622 1438 aa19.43■□□□□ 0.7
DNMT3B-205ENST00000443239 CEP164Q9UPV0 1460 aa19.42■□□□□ 0.7
DNMT3B-205ENST00000443239 NCAPD3P42695 1498 aa19.41■□□□□ 0.7
DNMT3B-205ENST00000443239 SYNJ1O43426 1573 aa19.38■□□□□ 0.69
DNMT3B-205ENST00000443239 HMGXB3Q12766 1538 aa19.36■□□□□ 0.69
DNMT3B-205ENST00000443239 VPS8Q8N3P4 1428 aa19.34■□□□□ 0.69
DNMT3B-205ENST00000443239 KIF21BO75037 1637 aa19.29■□□□□ 0.68
DNMT3B-205ENST00000443239 RAPGEF2Q9Y4G8 1499 aa19.26■□□□□ 0.67
DNMT3B-205ENST00000443239 TOP2BQ02880 1626 aa19.17■□□□□ 0.66
DNMT3B-205ENST00000443239 CFTRP13569 1480 aa19.15■□□□□ 0.66
DNMT3B-205ENST00000443239 DHX57Q6P158 1386 aaKnown RBP19.13■□□□□ 0.65
DNMT3B-205ENST00000443239 CLSPNQ9HAW4 1339 aa19.13■□□□□ 0.65
DNMT3B-205ENST00000443239 CC2D2AQ9P2K1 1620 aa19.12■□□□□ 0.65
DNMT3B-205ENST00000443239 BIVM-ERCC5R4GMW8 1640 aa19.1■□□□□ 0.65
DNMT3B-205ENST00000443239 KANK4Q5T7N3 995 aaPredicted RBP19.09■□□□□ 0.65
DNMT3B-205ENST00000443239 CUX1P39880 1505 aa19.08■□□□□ 0.65
DNMT3B-205ENST00000443239 SUPT16HQ9Y5B9 1047 aaKnown RBP19.06■□□□□ 0.64
DNMT3B-205ENST00000443239 ITGAEP38570 1179 aa19.02■□□□□ 0.64
DNMT3B-205ENST00000443239 CADPSQ9ULU8 1353 aa19■□□□□ 0.63
DNMT3B-205ENST00000443239 ARAP1Q96P48 1450 aa18.99■□□□□ 0.63
DNMT3B-205ENST00000443239 PRXQ9BXM0 1461 aa18.94■□□□□ 0.62
DNMT3B-205ENST00000443239 PRDM2Q13029 1718 aa18.94■□□□□ 0.62
DNMT3B-205ENST00000443239 ERICH3Q5RHP9 1530 aa18.92■□□□□ 0.62
DNMT3B-205ENST00000443239 RRBP1Q9P2E9 1410 aaKnown RBP18.91■□□□□ 0.62
DNMT3B-205ENST00000443239 CCNB3Q8WWL7 1395 aa18.9■□□□□ 0.62
DNMT3B-205ENST00000443239 KIF27Q86VH2 1401 aa18.88■□□□□ 0.61
DNMT3B-205ENST00000443239 KCNH8Q96L42 1107 aa18.87■□□□□ 0.61
DNMT3B-205ENST00000443239 TSHZ2Q9NRE2 1034 aa18.84■□□□□ 0.61
DNMT3B-205ENST00000443239 NESP48681 1621 aa18.83■□□□□ 0.6
DNMT3B-205ENST00000443239 FANCD2Q9BXW9 1451 aa18.82■□□□□ 0.6
DNMT3B-205ENST00000443239 RAB3GAP2Q9H2M9 1393 aa18.81■□□□□ 0.6
DNMT3B-205ENST00000443239 DNAJC5BQ9UF47 199 aa18.8■□□□□ 0.6
DNMT3B-205ENST00000443239 CUX2O14529 1486 aa18.8■□□□□ 0.6
DNMT3B-205ENST00000443239 FGD5Q6ZNL6 1462 aa18.8■□□□□ 0.6
DNMT3B-205ENST00000443239 BCANQ96GW7 911 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms