RNA–Protein interactions for RNA: ENST00000636958.1

ARID1A-215, Transcript of AT-rich interaction domain 1A, humanhuman

TSL 5

Gene ARID1A, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1A-215ENST00000636958 NISCHQ9Y2I1 1504 aa35.48■■■■□ 3.27
ARID1A-215ENST00000636958 CCDC180Q9P1Z9 1646 aa31.39■■■□□ 2.62
ARID1A-215ENST00000636958 ABCC9O60706 1549 aa30.37■■■□□ 2.45
ARID1A-215ENST00000636958 ZCCHC6Q5VYS8 1495 aaKnown RBP29.64■■■□□ 2.34
ARID1A-215ENST00000636958 DCAF8L2P0C7V8 631 aa29.53■■■□□ 2.32
ARID1A-215ENST00000636958 NACADO15069 1562 aa29.43■■■□□ 2.3
ARID1A-215ENST00000636958 RB1CC1Q8TDY2 1594 aa29.38■■■□□ 2.29
ARID1A-215ENST00000636958 DCAF1Q9Y4B6 1507 aa29.37■■■□□ 2.29
ARID1A-215ENST00000636958 MYO15BQ96JP2 1530 aa29.37■■■□□ 2.29
ARID1A-215ENST00000636958 UNC13AQ9UPW8 1703 aa28.74■■■□□ 2.19
ARID1A-215ENST00000636958 SCRIBQ14160 1630 aa28.68■■■□□ 2.18
ARID1A-215ENST00000636958 BICRAQ9NZM4 1560 aa28.46■■■□□ 2.15
ARID1A-215ENST00000636958 PABPN1Q86U42 306 aaKnown RBP eCLIP28.45■■■□□ 2.14
ARID1A-215ENST00000636958 SHROOM4Q9ULL8 1493 aa28.27■■■□□ 2.12
ARID1A-215ENST00000636958 EIF4G1Q04637 1599 aaKnown RBP27.7■■■□□ 2.02
ARID1A-215ENST00000636958 CECR2Q9BXF3 1484 aa27.61■■■□□ 2.01
ARID1A-215ENST00000636958 DNAJC5BQ9UF47 199 aa27.54■■■□□ 2
ARID1A-215ENST00000636958 CC2D2AQ9P2K1 1620 aa27.49■■□□□ 1.99
ARID1A-215ENST00000636958 BAZ1AQ9NRL2 1556 aaPredicted RBP27.49■■□□□ 1.99
ARID1A-215ENST00000636958 SMARCA4P51532 1647 aa27.47■■□□□ 1.99
ARID1A-215ENST00000636958 MROH2BQ7Z745 1585 aa27.35■■□□□ 1.97
ARID1A-215ENST00000636958 ATAD2BQ9ULI0 1458 aa27.22■■□□□ 1.95
ARID1A-215ENST00000636958 SMARCA2P51531 1590 aa27.21■■□□□ 1.95
ARID1A-215ENST00000636958 PEG3Q9GZU2 1588 aa27.19■■□□□ 1.94
ARID1A-215ENST00000636958 RSF1Q96T23 1441 aaPredicted RBP27.17■■□□□ 1.94
ARID1A-215ENST00000636958 NCAPD3P42695 1498 aa27.15■■□□□ 1.94
ARID1A-215ENST00000636958 WIZO95785 1651 aa27.1■■□□□ 1.93
ARID1A-215ENST00000636958 HMGXB3Q12766 1538 aa27.05■■□□□ 1.92
ARID1A-215ENST00000636958 BAZ1BQ9UIG0 1483 aaKnown RBP27.02■■□□□ 1.92
ARID1A-215ENST00000636958 TOP2AP11388 1531 aaKnown RBP26.82■■□□□ 1.88
ARID1A-215ENST00000636958 SUPT5HO00267 1087 aaKnown RBP26.79■■□□□ 1.88
ARID1A-215ENST00000636958 CCDC88BA6NC98 1476 aa26.5■■□□□ 1.83
ARID1A-215ENST00000636958 NESP48681 1621 aa26.39■■□□□ 1.81
ARID1A-215ENST00000636958 LAMC3Q9Y6N6 1575 aa26.39■■□□□ 1.81
ARID1A-215ENST00000636958 CADPSQ9ULU8 1353 aa26.38■■□□□ 1.81
ARID1A-215ENST00000636958 CFTRP13569 1480 aa26.3■■□□□ 1.8
ARID1A-215ENST00000636958 PDS5BQ9NTI5 1447 aa26.19■■□□□ 1.78
ARID1A-215ENST00000636958 ERCC6Q03468 1493 aa26.16■■□□□ 1.78
ARID1A-215ENST00000636958 PRDM2Q13029 1718 aa26.15■■□□□ 1.78
ARID1A-215ENST00000636958 KIF21AQ7Z4S6 1674 aa26.1■■□□□ 1.77
ARID1A-215ENST00000636958 FANCD2Q9BXW9 1451 aa26.08■■□□□ 1.77
ARID1A-215ENST00000636958 CEP164Q9UPV0 1460 aa26.02■■□□□ 1.76
ARID1A-215ENST00000636958 THOC2Q8NI27 1593 aaKnown RBP25.91■■□□□ 1.74
ARID1A-215ENST00000636958 MRC2Q9UBG0 1479 aa25.9■■□□□ 1.74
ARID1A-215ENST00000636958 WDR62O43379 1518 aa25.8■■□□□ 1.72
ARID1A-215ENST00000636958 URB2Q14146 1524 aaKnown RBP25.79■■□□□ 1.72
ARID1A-215ENST00000636958 CUX2O14529 1486 aa25.75■■□□□ 1.71
ARID1A-215ENST00000636958 ABCC8Q09428 1581 aa25.72■■□□□ 1.71
ARID1A-215ENST00000636958 DNMBPQ6XZF7 1577 aa25.7■■□□□ 1.71
ARID1A-215ENST00000636958 TOPBP1Q92547 1522 aa25.7■■□□□ 1.7
ARID1A-215ENST00000636958 CUX1P39880 1505 aa25.64■■□□□ 1.69
ARID1A-215ENST00000636958 WRNQ14191 1432 aaPredicted RBP eCLIP25.62■■□□□ 1.69
ARID1A-215ENST00000636958 TOP2BQ02880 1626 aa25.53■■□□□ 1.68
ARID1A-215ENST00000636958 SYNJ1O43426 1573 aa25.53■■□□□ 1.68
ARID1A-215ENST00000636958 BIVM-ERCC5R4GMW8 1640 aa25.52■■□□□ 1.68
ARID1A-215ENST00000636958 POLA1P09884 1462 aaPredicted RBP25.51■■□□□ 1.67
ARID1A-215ENST00000636958 FGD5Q6ZNL6 1462 aa25.51■■□□□ 1.67
ARID1A-215ENST00000636958 IFT140Q96RY7 1462 aa25.45■■□□□ 1.66
ARID1A-215ENST00000636958 SOGA1O94964 1423 aa25.42■■□□□ 1.66
ARID1A-215ENST00000636958 RAD54L2Q9Y4B4 1467 aa25.4■■□□□ 1.66
ARID1A-215ENST00000636958 TARBP1Q13395 1621 aaKnown RBP25.39■■□□□ 1.66
ARID1A-215ENST00000636958 ZNF608Q9ULD9 1512 aaPredicted RBP25.3■■□□□ 1.64
ARID1A-215ENST00000636958 WDR97A6NE52 1622 aa25.28■■□□□ 1.64
ARID1A-215ENST00000636958 TRIM41Q8WV44 630 aa25.28■■□□□ 1.64
ARID1A-215ENST00000636958 ABCA10Q8WWZ4 1543 aa25.27■■□□□ 1.64
ARID1A-215ENST00000636958 EIF4G3O43432 1585 aaKnown RBP25.23■■□□□ 1.63
ARID1A-215ENST00000636958 TDRD9Q8NDG6 1382 aaKnown RBP25.23■■□□□ 1.63
ARID1A-215ENST00000636958 AQRO60306 1485 aaKnown RBP eCLIP25.22■■□□□ 1.634e-7■■■■■ 45.2
ARID1A-215ENST00000636958 CHIC1Q5VXU3 224 aa25.2■■□□□ 1.63
ARID1A-215ENST00000636958 ABCA5Q8WWZ7 1642 aa25.14■■□□□ 1.61
ARID1A-215ENST00000636958 GAPVD1Q14C86 1478 aa25.13■■□□□ 1.61
ARID1A-215ENST00000636958 GRIN2BQ13224 1484 aa25.07■■□□□ 1.6
ARID1A-215ENST00000636958 PBRM1Q86U86 1689 aa25.06■■□□□ 1.6
ARID1A-215ENST00000636958 KIF27Q86VH2 1401 aa25.06■■□□□ 1.6
ARID1A-215ENST00000636958 SNAPC4Q5SXM2 1469 aa24.99■■□□□ 1.59
ARID1A-215ENST00000636958 ERICH3Q5RHP9 1530 aa24.98■■□□□ 1.59
ARID1A-215ENST00000636958 MAGI1Q96QZ7 1491 aaPredicted RBP24.97■■□□□ 1.59
ARID1A-215ENST00000636958 RUSC2Q8N2Y8 1516 aa24.94■■□□□ 1.58
ARID1A-215ENST00000636958 IGF1RP08069 1367 aa24.9■■□□□ 1.58
ARID1A-215ENST00000636958 SYNJ2O15056 1496 aa24.87■■□□□ 1.57
ARID1A-215ENST00000636958 ADAMTS12P58397 1594 aa24.87■■□□□ 1.57
ARID1A-215ENST00000636958 FBLN2P98095 1184 aa24.86■■□□□ 1.57
ARID1A-215ENST00000636958 CHD1O14646 1710 aa24.85■■□□□ 1.57
ARID1A-215ENST00000636958 FHAD1B1AJZ9 1412 aa24.85■■□□□ 1.57
ARID1A-215ENST00000636958 CHMP7Q8WUX9 453 aaPredicted RBP24.84■■□□□ 1.57
ARID1A-215ENST00000636958 CUL7Q14999 1698 aa24.83■■□□□ 1.57
ARID1A-215ENST00000636958 EEA1Q15075 1411 aa24.82■■□□□ 1.56
ARID1A-215ENST00000636958 CARMIL1Q5VZK9 1371 aa24.78■■□□□ 1.56
ARID1A-215ENST00000636958 OSCARQ8IYS5 282 aa24.76■■□□□ 1.55
ARID1A-215ENST00000636958 GRIN2AQ12879 1464 aa24.75■■□□□ 1.55
ARID1A-215ENST00000636958 FAM9AQ8IZU1 332 aaPredicted RBP24.75■■□□□ 1.55
ARID1A-215ENST00000636958 CSRNP3Q8WYN3 585 aa24.74■■□□□ 1.55
ARID1A-215ENST00000636958 RAPGEF2Q9Y4G8 1499 aa24.67■■□□□ 1.54
ARID1A-215ENST00000636958 PRXQ9BXM0 1461 aa24.66■■□□□ 1.54
ARID1A-215ENST00000636958 NUP160Q12769 1436 aa24.62■■□□□ 1.53
ARID1A-215ENST00000636958 CEP170Q5SW79 1584 aa24.61■■□□□ 1.53
ARID1A-215ENST00000636958 CLASP1Q7Z460 1538 aa24.57■■□□□ 1.52
ARID1A-215ENST00000636958 KIF21BO75037 1637 aa24.53■■□□□ 1.52
ARID1A-215ENST00000636958 DNAJC5Q9H3Z4 198 aa24.52■■□□□ 1.52
ARID1A-215ENST00000636958 KIAA0586Q9BVV6 1533 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms