RNA–Protein interactions for RNA: ENST00000506088.1

MARCH3-204, Transcript of membrane associated ring-CH-type finger 3, humanhuman

TSL 2

Gene MARCH3, Length 814 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARCH3-204ENST00000506088 NISCHQ9Y2I1 1504 aa39.16■■■■□ 3.86
MARCH3-204ENST00000506088 CCDC180Q9P1Z9 1646 aa34.49■■■■□ 3.11
MARCH3-204ENST00000506088 ABCC9O60706 1549 aa33.3■■■□□ 2.92
MARCH3-204ENST00000506088 ZCCHC6Q5VYS8 1495 aaKnown RBP32.74■■■□□ 2.83
MARCH3-204ENST00000506088 DCAF8L2P0C7V8 631 aa32.47■■■□□ 2.79
MARCH3-204ENST00000506088 DCAF1Q9Y4B6 1507 aa32.38■■■□□ 2.77
MARCH3-204ENST00000506088 NACADO15069 1562 aa32.3■■■□□ 2.76
MARCH3-204ENST00000506088 MYO15BQ96JP2 1530 aa32.29■■■□□ 2.76
MARCH3-204ENST00000506088 RB1CC1Q8TDY2 1594 aa32.19■■■□□ 2.74
MARCH3-204ENST00000506088 SCRIBQ14160 1630 aa31.6■■■□□ 2.65
MARCH3-204ENST00000506088 UNC13AQ9UPW8 1703 aa31.55■■■□□ 2.64
MARCH3-204ENST00000506088 SHROOM4Q9ULL8 1493 aa31.34■■■□□ 2.61
MARCH3-204ENST00000506088 BICRAQ9NZM4 1560 aa31.32■■■□□ 2.6
MARCH3-204ENST00000506088 PABPN1Q86U42 306 aaKnown RBP eCLIP31.25■■■□□ 2.59
MARCH3-204ENST00000506088 CECR2Q9BXF3 1484 aa30.52■■■□□ 2.48
MARCH3-204ENST00000506088 EIF4G1Q04637 1599 aaKnown RBP30.38■■■□□ 2.45
MARCH3-204ENST00000506088 SMARCA4P51532 1647 aa30.26■■■□□ 2.44
MARCH3-204ENST00000506088 BAZ1AQ9NRL2 1556 aaPredicted RBP30.26■■■□□ 2.43
MARCH3-204ENST00000506088 MROH2BQ7Z745 1585 aa30.24■■■□□ 2.43
MARCH3-204ENST00000506088 DNAJC5BQ9UF47 199 aa30.14■■■□□ 2.42
MARCH3-204ENST00000506088 CC2D2AQ9P2K1 1620 aa30.12■■■□□ 2.41
MARCH3-204ENST00000506088 RSF1Q96T23 1441 aaPredicted RBP30.09■■■□□ 2.41
MARCH3-204ENST00000506088 ATAD2BQ9ULI0 1458 aa29.96■■■□□ 2.39
MARCH3-204ENST00000506088 PEG3Q9GZU2 1588 aa29.94■■■□□ 2.38
MARCH3-204ENST00000506088 WIZO95785 1651 aa29.93■■■□□ 2.38
MARCH3-204ENST00000506088 SMARCA2P51531 1590 aa29.88■■■□□ 2.37
MARCH3-204ENST00000506088 NCAPD3P42695 1498 aa29.84■■■□□ 2.37
MARCH3-204ENST00000506088 SUPT5HO00267 1087 aaKnown RBP29.75■■■□□ 2.35
MARCH3-204ENST00000506088 HMGXB3Q12766 1538 aa29.71■■■□□ 2.35
MARCH3-204ENST00000506088 BAZ1BQ9UIG0 1483 aaKnown RBP29.7■■■□□ 2.35
MARCH3-204ENST00000506088 TOP2AP11388 1531 aaKnown RBP29.6■■■□□ 2.33
MARCH3-204ENST00000506088 CCDC88BA6NC98 1476 aa29.29■■■□□ 2.28
MARCH3-204ENST00000506088 NESP48681 1621 aa29.02■■■□□ 2.24
MARCH3-204ENST00000506088 CADPSQ9ULU8 1353 aa29■■■□□ 2.23
MARCH3-204ENST00000506088 CFTRP13569 1480 aa28.96■■■□□ 2.23
MARCH3-204ENST00000506088 LAMC3Q9Y6N6 1575 aa28.92■■■□□ 2.22
MARCH3-204ENST00000506088 PRDM2Q13029 1718 aa28.72■■■□□ 2.19
MARCH3-204ENST00000506088 PDS5BQ9NTI5 1447 aa28.69■■■□□ 2.18
MARCH3-204ENST00000506088 FANCD2Q9BXW9 1451 aa28.66■■■□□ 2.18
MARCH3-204ENST00000506088 KIF21AQ7Z4S6 1674 aa28.64■■■□□ 2.18
MARCH3-204ENST00000506088 ERCC6Q03468 1493 aa28.56■■■□□ 2.16
MARCH3-204ENST00000506088 CEP164Q9UPV0 1460 aa28.55■■■□□ 2.16
MARCH3-204ENST00000506088 ABCC8Q09428 1581 aa28.41■■■□□ 2.14
MARCH3-204ENST00000506088 THOC2Q8NI27 1593 aaKnown RBP28.41■■■□□ 2.14
MARCH3-204ENST00000506088 MRC2Q9UBG0 1479 aa28.4■■■□□ 2.14
MARCH3-204ENST00000506088 URB2Q14146 1524 aaKnown RBP28.4■■■□□ 2.14
MARCH3-204ENST00000506088 CUX1P39880 1505 aa28.33■■■□□ 2.13
MARCH3-204ENST00000506088 WDR62O43379 1518 aa28.3■■■□□ 2.12
MARCH3-204ENST00000506088 WRNQ14191 1432 aaPredicted RBP eCLIP28.3■■■□□ 2.12
MARCH3-204ENST00000506088 TOPBP1Q92547 1522 aa28.29■■■□□ 2.12
MARCH3-204ENST00000506088 DNMBPQ6XZF7 1577 aa28.28■■■□□ 2.12
MARCH3-204ENST00000506088 SYNJ1O43426 1573 aa28.26■■■□□ 2.11
MARCH3-204ENST00000506088 TOP2BQ02880 1626 aa28.18■■■□□ 2.1
MARCH3-204ENST00000506088 BIVM-ERCC5R4GMW8 1640 aa28.18■■■□□ 2.1
MARCH3-204ENST00000506088 CHIC1Q5VXU3 224 aa28.14■■■□□ 2.1
MARCH3-204ENST00000506088 FGD5Q6ZNL6 1462 aa28.11■■■□□ 2.09
MARCH3-204ENST00000506088 POLA1P09884 1462 aaPredicted RBP28.09■■■□□ 2.09
MARCH3-204ENST00000506088 CUX2O14529 1486 aa28.08■■■□□ 2.09
MARCH3-204ENST00000506088 TRIM41Q8WV44 630 aa28.02■■■□□ 2.08
MARCH3-204ENST00000506088 RAD54L2Q9Y4B4 1467 aa28.01■■■□□ 2.07
MARCH3-204ENST00000506088 SOGA1O94964 1423 aa27.97■■■□□ 2.07
MARCH3-204ENST00000506088 TARBP1Q13395 1621 aaKnown RBP27.96■■■□□ 2.07
MARCH3-204ENST00000506088 IFT140Q96RY7 1462 aa27.93■■■□□ 2.06
MARCH3-204ENST00000506088 WDR97A6NE52 1622 aa27.85■■■□□ 2.05
MARCH3-204ENST00000506088 ABCA10Q8WWZ4 1543 aa27.84■■■□□ 2.05
MARCH3-204ENST00000506088 ZNF608Q9ULD9 1512 aaPredicted RBP27.84■■■□□ 2.05
MARCH3-204ENST00000506088 TDRD9Q8NDG6 1382 aaKnown RBP27.78■■■□□ 2.04
MARCH3-204ENST00000506088 AQRO60306 1485 aaKnown RBP eCLIP27.74■■■□□ 2.032e-6■■■■■ 32.1
MARCH3-204ENST00000506088 RUSC2Q8N2Y8 1516 aa27.71■■■□□ 2.03
MARCH3-204ENST00000506088 ABCA5Q8WWZ7 1642 aa27.7■■■□□ 2.02
MARCH3-204ENST00000506088 EIF4G3O43432 1585 aaKnown RBP27.69■■■□□ 2.02
MARCH3-204ENST00000506088 GAPVD1Q14C86 1478 aa27.65■■■□□ 2.02
MARCH3-204ENST00000506088 KIF27Q86VH2 1401 aa27.63■■■□□ 2.01
MARCH3-204ENST00000506088 GRIN2BQ13224 1484 aa27.55■■■□□ 2
MARCH3-204ENST00000506088 PBRM1Q86U86 1689 aa27.55■■■□□ 2
MARCH3-204ENST00000506088 IGF1RP08069 1367 aa27.53■■■□□ 2
MARCH3-204ENST00000506088 FAM9AQ8IZU1 332 aaPredicted RBP27.5■■□□□ 1.99
MARCH3-204ENST00000506088 ERICH3Q5RHP9 1530 aa27.49■■□□□ 1.99
MARCH3-204ENST00000506088 SNAPC4Q5SXM2 1469 aa27.47■■□□□ 1.99
MARCH3-204ENST00000506088 EEA1Q15075 1411 aa27.46■■□□□ 1.99
MARCH3-204ENST00000506088 CSRNP3Q8WYN3 585 aa27.41■■□□□ 1.98
MARCH3-204ENST00000506088 MAGI1Q96QZ7 1491 aaPredicted RBP27.4■■□□□ 1.98
MARCH3-204ENST00000506088 ADAMTS12P58397 1594 aa27.39■■□□□ 1.97
MARCH3-204ENST00000506088 CARMIL1Q5VZK9 1371 aa27.35■■□□□ 1.97
MARCH3-204ENST00000506088 FHAD1B1AJZ9 1412 aa27.34■■□□□ 1.97
MARCH3-204ENST00000506088 CUL7Q14999 1698 aa27.33■■□□□ 1.97
MARCH3-204ENST00000506088 PRXQ9BXM0 1461 aa27.32■■□□□ 1.96
MARCH3-204ENST00000506088 SYNJ2O15056 1496 aa27.31■■□□□ 1.96
MARCH3-204ENST00000506088 CHD1O14646 1710 aa27.24■■□□□ 1.95
MARCH3-204ENST00000506088 FBLN2P98095 1184 aa27.23■■□□□ 1.95
MARCH3-204ENST00000506088 CHMP7Q8WUX9 453 aaPredicted RBP27.23■■□□□ 1.95
MARCH3-204ENST00000506088 RAPGEF2Q9Y4G8 1499 aa27.22■■□□□ 1.95
MARCH3-204ENST00000506088 GRIN2AQ12879 1464 aa27.21■■□□□ 1.95
MARCH3-204ENST00000506088 KIF21BO75037 1637 aa27.18■■□□□ 1.94
MARCH3-204ENST00000506088 EHMT2Q96KQ7 1210 aa27.12■■□□□ 1.93
MARCH3-204ENST00000506088 CEP170Q5SW79 1584 aa27.09■■□□□ 1.93
MARCH3-204ENST00000506088 NUP160Q12769 1436 aa27.09■■□□□ 1.93
MARCH3-204ENST00000506088 GOLGA3Q08378 1498 aa27.06■■□□□ 1.92
MARCH3-204ENST00000506088 LOC105371045A0A1W2PR82 267 aa27.02■■□□□ 1.92
MARCH3-204ENST00000506088 OSCARQ8IYS5 282 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms