RNA–Protein interactions for RNA: ENST00000450465.6

TNRC6A-203, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 3,700 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-203ENST00000450465 NISCHQ9Y2I1 1504 aa19.83■□□□□ 0.76
TNRC6A-203ENST00000450465 CCDC180Q9P1Z9 1646 aa17.7■□□□□ 0.42
TNRC6A-203ENST00000450465 DCAF1Q9Y4B6 1507 aa16.84■□□□□ 0.29
TNRC6A-203ENST00000450465 ZCCHC6Q5VYS8 1495 aaKnown RBP16.79■□□□□ 0.28
TNRC6A-203ENST00000450465 MYO15BQ96JP2 1530 aa16.69■□□□□ 0.26
TNRC6A-203ENST00000450465 NACADO15069 1562 aa16.22■□□□□ 0.19
TNRC6A-203ENST00000450465 RB1CC1Q8TDY2 1594 aa15.93■□□□□ 0.14
TNRC6A-203ENST00000450465 UNC13AQ9UPW8 1703 aa15.83■□□□□ 0.13
TNRC6A-203ENST00000450465 ABCC9O60706 1549 aa15.79■□□□□ 0.12
TNRC6A-203ENST00000450465 SHROOM4Q9ULL8 1493 aa15.75■□□□□ 0.11
TNRC6A-203ENST00000450465 SCRIBQ14160 1630 aa15.6■□□□□ 0.09
TNRC6A-203ENST00000450465 BICRAQ9NZM4 1560 aa15.54■□□□□ 0.08
TNRC6A-203ENST00000450465 PEG3Q9GZU2 1588 aa15.42■□□□□ 0.06
TNRC6A-203ENST00000450465 BAZ1AQ9NRL2 1556 aaPredicted RBP15.33■□□□□ 0.04
TNRC6A-203ENST00000450465 SMARCA4P51532 1647 aa15.28■□□□□ 0.04
TNRC6A-203ENST00000450465 RSF1Q96T23 1441 aaPredicted RBP15.23■□□□□ 0.03
TNRC6A-203ENST00000450465 EIF4G1Q04637 1599 aaKnown RBP15.17■□□□□ 0.02
TNRC6A-203ENST00000450465 MROH2BQ7Z745 1585 aa15.16■□□□□ 0.02
TNRC6A-203ENST00000450465 TOP2AP11388 1531 aaKnown RBP15.12■□□□□ 0.01
TNRC6A-203ENST00000450465 SMARCA2P51531 1590 aa15.1■□□□□ 0.01
TNRC6A-203ENST00000450465 CECR2Q9BXF3 1484 aa15.09■□□□□ 0.01
TNRC6A-203ENST00000450465 WIZO95785 1651 aa15.06■□□□□ 0
TNRC6A-203ENST00000450465 HMGXB3Q12766 1538 aa15.02□□□□□ -0.01
TNRC6A-203ENST00000450465 DCAF8L2P0C7V8 631 aa14.99□□□□□ -0.01
TNRC6A-203ENST00000450465 PRDM2Q13029 1718 aa14.91□□□□□ -0.02
TNRC6A-203ENST00000450465 ATAD2BQ9ULI0 1458 aa14.85□□□□□ -0.03
TNRC6A-203ENST00000450465 NCAPD3P42695 1498 aa14.85□□□□□ -0.03
TNRC6A-203ENST00000450465 CCDC88BA6NC98 1476 aa14.7□□□□□ -0.06
TNRC6A-203ENST00000450465 BAZ1BQ9UIG0 1483 aaKnown RBP14.65□□□□□ -0.06
TNRC6A-203ENST00000450465 BIVM-ERCC5R4GMW8 1640 aa14.6□□□□□ -0.07
TNRC6A-203ENST00000450465 CC2D2AQ9P2K1 1620 aa14.6□□□□□ -0.07
TNRC6A-203ENST00000450465 SUPT5HO00267 1087 aaKnown RBP14.57□□□□□ -0.08
TNRC6A-203ENST00000450465 CFTRP13569 1480 aa14.5□□□□□ -0.09
TNRC6A-203ENST00000450465 CHIC1Q5VXU3 224 aa14.48□□□□□ -0.09
TNRC6A-203ENST00000450465 TOP2BQ02880 1626 aa14.47□□□□□ -0.09
TNRC6A-203ENST00000450465 PABPN1Q86U42 306 aaKnown RBP eCLIP14.47□□□□□ -0.095e-7■□□□□ 8
TNRC6A-203ENST00000450465 LAMC3Q9Y6N6 1575 aa14.41□□□□□ -0.1
TNRC6A-203ENST00000450465 SYNJ1O43426 1573 aa14.36□□□□□ -0.11
TNRC6A-203ENST00000450465 EEA1Q15075 1411 aa14.34□□□□□ -0.11
TNRC6A-203ENST00000450465 WDR97A6NE52 1622 aa14.31□□□□□ -0.12
TNRC6A-203ENST00000450465 KIF21BO75037 1637 aa14.29□□□□□ -0.12
TNRC6A-203ENST00000450465 ABCC8Q09428 1581 aa14.27□□□□□ -0.13
TNRC6A-203ENST00000450465 WRNQ14191 1432 aaPredicted RBP eCLIP14.23□□□□□ -0.13
TNRC6A-203ENST00000450465 CUX1P39880 1505 aa14.23□□□□□ -0.13
TNRC6A-203ENST00000450465 CADPSQ9ULU8 1353 aa14.23□□□□□ -0.13
TNRC6A-203ENST00000450465 DNMBPQ6XZF7 1577 aa14.21□□□□□ -0.13
TNRC6A-203ENST00000450465 ERICH3Q5RHP9 1530 aa14.17□□□□□ -0.14
TNRC6A-203ENST00000450465 KIF21AQ7Z4S6 1674 aa14.11□□□□□ -0.15
TNRC6A-203ENST00000450465 ABCA5Q8WWZ7 1642 aa14.07□□□□□ -0.16
TNRC6A-203ENST00000450465 FANCD2Q9BXW9 1451 aa14.06□□□□□ -0.16
TNRC6A-203ENST00000450465 WDR62O43379 1518 aa14.05□□□□□ -0.16
TNRC6A-203ENST00000450465 ABCA10Q8WWZ4 1543 aa14.05□□□□□ -0.16
TNRC6A-203ENST00000450465 CUL7Q14999 1698 aa14.04□□□□□ -0.16
TNRC6A-203ENST00000450465 TARBP1Q13395 1621 aaKnown RBP14.04□□□□□ -0.16
TNRC6A-203ENST00000450465 PRXQ9BXM0 1461 aa14.03□□□□□ -0.16
TNRC6A-203ENST00000450465 TOPBP1Q92547 1522 aa14.02□□□□□ -0.17
TNRC6A-203ENST00000450465 THOC2Q8NI27 1593 aaKnown RBP14.01□□□□□ -0.17
TNRC6A-203ENST00000450465 CEP164Q9UPV0 1460 aa13.98□□□□□ -0.17
TNRC6A-203ENST00000450465 URB2Q14146 1524 aaKnown RBP13.97□□□□□ -0.17
TNRC6A-203ENST00000450465 TRIM41Q8WV44 630 aa13.97□□□□□ -0.17
TNRC6A-203ENST00000450465 PDS5BQ9NTI5 1447 aa13.97□□□□□ -0.17
TNRC6A-203ENST00000450465 GOLGA3Q08378 1498 aa13.95□□□□□ -0.18
TNRC6A-203ENST00000450465 SOGA1O94964 1423 aa13.94□□□□□ -0.18
TNRC6A-203ENST00000450465 TNIKQ9UKE5 1360 aa13.93□□□□□ -0.18
TNRC6A-203ENST00000450465 FGD5Q6ZNL6 1462 aa13.93□□□□□ -0.18
TNRC6A-203ENST00000450465 PBRM1Q86U86 1689 aa13.92□□□□□ -0.18
TNRC6A-203ENST00000450465 POLA1P09884 1462 aaPredicted RBP13.91□□□□□ -0.18
TNRC6A-203ENST00000450465 MRC2Q9UBG0 1479 aa13.9□□□□□ -0.18
TNRC6A-203ENST00000450465 NESP48681 1621 aa13.9□□□□□ -0.19
TNRC6A-203ENST00000450465 CTTNBP2Q8WZ74 1663 aa13.89□□□□□ -0.19
TNRC6A-203ENST00000450465 RUSC2Q8N2Y8 1516 aa13.89□□□□□ -0.19
TNRC6A-203ENST00000450465 KIF27Q86VH2 1401 aa13.87□□□□□ -0.19
TNRC6A-203ENST00000450465 CUX2O14529 1486 aa13.79□□□□□ -0.2
TNRC6A-203ENST00000450465 ADAMTS12P58397 1594 aa13.79□□□□□ -0.2
TNRC6A-203ENST00000450465 SAMD9Q5K651 1589 aa13.77□□□□□ -0.2
TNRC6A-203ENST00000450465 MAP3K1Q13233 1512 aa13.77□□□□□ -0.2
TNRC6A-203ENST00000450465 IFT140Q96RY7 1462 aa13.77□□□□□ -0.2
TNRC6A-203ENST00000450465 EFCAB5A4FU69 1503 aa13.76□□□□□ -0.21
TNRC6A-203ENST00000450465 CSRNP3Q8WYN3 585 aa13.75□□□□□ -0.21
TNRC6A-203ENST00000450465 RAPGEF2Q9Y4G8 1499 aa13.75□□□□□ -0.21
TNRC6A-203ENST00000450465 IGF1RP08069 1367 aa13.74□□□□□ -0.21
TNRC6A-203ENST00000450465 CEP162Q5TB80 1403 aa13.71□□□□□ -0.21
TNRC6A-203ENST00000450465 CFAP43Q8NDM7 1665 aa13.69□□□□□ -0.22
TNRC6A-203ENST00000450465 EIF4G3O43432 1585 aaKnown RBP13.69□□□□□ -0.22
TNRC6A-203ENST00000450465 AQRO60306 1485 aaKnown RBP eCLIP13.67□□□□□ -0.223e-7■■■■□ 20.4
TNRC6A-203ENST00000450465 ARAP1Q96P48 1450 aa13.65□□□□□ -0.22
TNRC6A-203ENST00000450465 GAPVD1Q14C86 1478 aa13.64□□□□□ -0.23
TNRC6A-203ENST00000450465 RAD54L2Q9Y4B4 1467 aa13.64□□□□□ -0.23
TNRC6A-203ENST00000450465 MAGI1Q96QZ7 1491 aaPredicted RBP13.62□□□□□ -0.23
TNRC6A-203ENST00000450465 VPS8Q8N3P4 1428 aa13.61□□□□□ -0.23
TNRC6A-203ENST00000450465 DNAJC5BQ9UF47 199 aa13.61□□□□□ -0.23
TNRC6A-203ENST00000450465 GRIN2BQ13224 1484 aa13.6□□□□□ -0.23
TNRC6A-203ENST00000450465 UGGT2Q9NYU1 1516 aa13.6□□□□□ -0.23
TNRC6A-203ENST00000450465 FHAD1B1AJZ9 1412 aa13.59□□□□□ -0.23
TNRC6A-203ENST00000450465 ARHGAP35Q9NRY4 1499 aa13.58□□□□□ -0.24
TNRC6A-203ENST00000450465 CARMIL1Q5VZK9 1371 aa13.56□□□□□ -0.24
TNRC6A-203ENST00000450465 LOC105371045A0A1W2PR82 267 aa13.56□□□□□ -0.24
TNRC6A-203ENST00000450465 SHROOM2Q13796 1616 aa13.55□□□□□ -0.24
TNRC6A-203ENST00000450465 LRRIQ1Q96JM4 1722 aa13.54□□□□□ -0.24
TNRC6A-203ENST00000450465 CLIP1P30622 1438 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms