RNA–Protein interactions for RNA: ENST00000348286.6

DNMT3B-203, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,048 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-203ENST00000348286 NISCHQ9Y2I1 1504 aa24.36■■□□□ 1.49
DNMT3B-203ENST00000348286 DCAF8L2P0C7V8 631 aa23.14■■□□□ 1.29
DNMT3B-203ENST00000348286 SUPT5HO00267 1087 aaKnown RBP22.61■■□□□ 1.21
DNMT3B-203ENST00000348286 SHROOM4Q9ULL8 1493 aa22.61■■□□□ 1.21
DNMT3B-203ENST00000348286 EHMT2Q96KQ7 1210 aa21.48■■□□□ 1.03
DNMT3B-203ENST00000348286 PCGF6Q9BYE7 350 aa21.2■□□□□ 0.99
DNMT3B-203ENST00000348286 FAM9AQ8IZU1 332 aaPredicted RBP21.18■□□□□ 0.98
DNMT3B-203ENST00000348286 CHIC1Q5VXU3 224 aa20.92■□□□□ 0.94
DNMT3B-203ENST00000348286 TRIM41Q8WV44 630 aa20.84■□□□□ 0.93
DNMT3B-203ENST00000348286 LOC105371045A0A1W2PR82 267 aa20.77■□□□□ 0.92
DNMT3B-203ENST00000348286 TTBK1Q5TCY1 1321 aaPredicted RBP20.72■□□□□ 0.91
DNMT3B-203ENST00000348286 PPARGC1BQ86YN6 1023 aaKnown RBP20.52■□□□□ 0.88
DNMT3B-203ENST00000348286 HRCP23327 699 aa20.48■□□□□ 0.87
DNMT3B-203ENST00000348286 RANGAP1P46060 587 aaPredicted RBP20.38■□□□□ 0.85
DNMT3B-203ENST00000348286 TRIM26Q12899 539 aaPredicted RBP20.34■□□□□ 0.85
DNMT3B-203ENST00000348286 ZCCHC6Q5VYS8 1495 aaKnown RBP20.33■□□□□ 0.85
DNMT3B-203ENST00000348286 APLP2Q06481 763 aa20.28■□□□□ 0.84
DNMT3B-203ENST00000348286 UBTFP17480 764 aaKnown RBP20.27■□□□□ 0.83
DNMT3B-203ENST00000348286 CCER1Q8TC90 406 aaPredicted RBP20.25■□□□□ 0.83
DNMT3B-203ENST00000348286 ABCC9O60706 1549 aa20.23■□□□□ 0.83
DNMT3B-203ENST00000348286 ZEB1P37275 1124 aaPredicted RBP20.2■□□□□ 0.82
DNMT3B-203ENST00000348286 PABPN1Q86U42 306 aaKnown RBP eCLIP19.95■□□□□ 0.78
DNMT3B-203ENST00000348286 CCDC180Q9P1Z9 1646 aa19.95■□□□□ 0.78
DNMT3B-203ENST00000348286 MYO15BQ96JP2 1530 aa19.92■□□□□ 0.78
DNMT3B-203ENST00000348286 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.86■□□□□ 0.77
DNMT3B-203ENST00000348286 SCRIBQ14160 1630 aa19.82■□□□□ 0.76
DNMT3B-203ENST00000348286 ATP1B4Q9UN42 357 aaPredicted RBP19.8■□□□□ 0.76
DNMT3B-203ENST00000348286 HNRNPUL2Q1KMD3 747 aaKnown RBP19.75■□□□□ 0.75
DNMT3B-203ENST00000348286 CENPBP07199 599 aaPredicted RBP19.71■□□□□ 0.75
DNMT3B-203ENST00000348286 YTHDC1Q96MU7 727 aaKnown RBP19.71■□□□□ 0.75
DNMT3B-203ENST00000348286 ITGAEP38570 1179 aa19.6■□□□□ 0.73
DNMT3B-203ENST00000348286 RSF1Q96T23 1441 aaPredicted RBP19.56■□□□□ 0.72
DNMT3B-203ENST00000348286 DCAF1Q9Y4B6 1507 aa19.54■□□□□ 0.72
DNMT3B-203ENST00000348286 CSRNP3Q8WYN3 585 aa19.45■□□□□ 0.7
DNMT3B-203ENST00000348286 DIEXFQ68CQ4 756 aaKnown RBP19.43■□□□□ 0.7
DNMT3B-203ENST00000348286 PELP1Q8IZL8 1130 aaKnown RBP19.36■□□□□ 0.69
DNMT3B-203ENST00000348286 CECR2Q9BXF3 1484 aa19.29■□□□□ 0.68
DNMT3B-203ENST00000348286 FAM50AQ14320 339 aaKnown RBP19.1■□□□□ 0.65
DNMT3B-203ENST00000348286 RB1CC1Q8TDY2 1594 aa19.09■□□□□ 0.65
DNMT3B-203ENST00000348286 ZNF316A6NFI3 1004 aaPredicted RBP19.09■□□□□ 0.65
DNMT3B-203ENST00000348286 NACADO15069 1562 aa19.08■□□□□ 0.65
DNMT3B-203ENST00000348286 GTF3C3Q9Y5Q9 886 aa19.08■□□□□ 0.64
DNMT3B-203ENST00000348286 P3H3Q8IVL6 736 aa19.06■□□□□ 0.64
DNMT3B-203ENST00000348286 MROH2BQ7Z745 1585 aa19.03■□□□□ 0.64
DNMT3B-203ENST00000348286 NEUROD1Q13562 356 aa19.01■□□□□ 0.63
DNMT3B-203ENST00000348286 ACIN1Q9UKV3 1341 aaKnown RBP18.96■□□□□ 0.63
DNMT3B-203ENST00000348286 CEP162Q5TB80 1403 aa18.94■□□□□ 0.62
DNMT3B-203ENST00000348286 NEFLP07196 543 aa18.93■□□□□ 0.62
DNMT3B-203ENST00000348286 CNGB1Q14028 1251 aaPredicted RBP18.9■□□□□ 0.62
DNMT3B-203ENST00000348286 SOGA1O94964 1423 aa18.87■□□□□ 0.61
DNMT3B-203ENST00000348286 BAZ1AQ9NRL2 1556 aaPredicted RBP18.87■□□□□ 0.61
DNMT3B-203ENST00000348286 WRNQ14191 1432 aaPredicted RBP eCLIP18.85■□□□□ 0.61
DNMT3B-203ENST00000348286 POLR3GLQ9BT43 218 aa18.84■□□□□ 0.61
DNMT3B-203ENST00000348286 CLIP1P30622 1438 aa18.84■□□□□ 0.61
DNMT3B-203ENST00000348286 SCAF1Q9H7N4 1312 aaKnown RBP18.83■□□□□ 0.6
DNMT3B-203ENST00000348286 ARID3CA6NKF2 412 aa18.79■□□□□ 0.6
DNMT3B-203ENST00000348286 ABCC8Q09428 1581 aa18.79■□□□□ 0.6
DNMT3B-203ENST00000348286 TNIKQ9UKE5 1360 aa18.79■□□□□ 0.6
DNMT3B-203ENST00000348286 WIZO95785 1651 aa18.79■□□□□ 0.6
DNMT3B-203ENST00000348286 CCDC88BA6NC98 1476 aa18.77■□□□□ 0.6
DNMT3B-203ENST00000348286 TRIM52Q96A61 297 aa18.76■□□□□ 0.59
DNMT3B-203ENST00000348286 GOLGA3Q08378 1498 aa18.75■□□□□ 0.59
DNMT3B-203ENST00000348286 EEA1Q15075 1411 aa18.73■□□□□ 0.59
DNMT3B-203ENST00000348286 MIER1Q8N108 512 aa18.71■□□□□ 0.59
DNMT3B-203ENST00000348286 BCANQ96GW7 911 aa18.69■□□□□ 0.58
DNMT3B-203ENST00000348286 BAZ1BQ9UIG0 1483 aaKnown RBP18.68■□□□□ 0.58
DNMT3B-203ENST00000348286 ERICH6Q7L0X2 663 aa18.64■□□□□ 0.57
DNMT3B-203ENST00000348286 FBLN2P98095 1184 aa18.6■□□□□ 0.57
DNMT3B-203ENST00000348286 CEP164Q9UPV0 1460 aa18.59■□□□□ 0.57
DNMT3B-203ENST00000348286 DDX10Q13206 875 aaKnown RBP18.56■□□□□ 0.56
DNMT3B-203ENST00000348286 ANP32CO43423 234 aa18.55■□□□□ 0.56
DNMT3B-203ENST00000348286 HIRIP3Q9BW71 556 aaPredicted RBP18.55■□□□□ 0.56
DNMT3B-203ENST00000348286 RUSC2Q8N2Y8 1516 aa18.54■□□□□ 0.56
DNMT3B-203ENST00000348286 ZNF326Q5BKZ1 582 aaKnown RBP18.52■□□□□ 0.56
DNMT3B-203ENST00000348286 CHIC2Q9UKJ5 165 aa18.48■□□□□ 0.55
DNMT3B-203ENST00000348286 TOP2AP11388 1531 aaKnown RBP18.48■□□□□ 0.55
DNMT3B-203ENST00000348286 MYT1LQ9UL68 1186 aa18.47■□□□□ 0.55
DNMT3B-203ENST00000348286 KIF27Q86VH2 1401 aa18.45■□□□□ 0.54
DNMT3B-203ENST00000348286 KANK4Q5T7N3 995 aaPredicted RBP18.45■□□□□ 0.54
DNMT3B-203ENST00000348286 ZNF777Q9ULD5 760 aaPredicted RBP18.41■□□□□ 0.54
DNMT3B-203ENST00000348286 TONSLQ96HA7 1378 aa18.39■□□□□ 0.53
DNMT3B-203ENST00000348286 VPS8Q8N3P4 1428 aa18.37■□□□□ 0.53
DNMT3B-203ENST00000348286 SMARCA4P51532 1647 aa18.37■□□□□ 0.53
DNMT3B-203ENST00000348286 SIN3AQ96ST3 1273 aa18.36■□□□□ 0.53
DNMT3B-203ENST00000348286 MTUS2Q5JR59 1369 aa18.36■□□□□ 0.53
DNMT3B-203ENST00000348286 MYT1Q01538 1121 aa18.35■□□□□ 0.53
DNMT3B-203ENST00000348286 FKBP8Q14318 412 aa18.32■□□□□ 0.52
DNMT3B-203ENST00000348286 RRP7BPQ9NSQ0 103 aa18.31■□□□□ 0.52
DNMT3B-203ENST00000348286 RAPGEF2Q9Y4G8 1499 aa18.3■□□□□ 0.52
DNMT3B-203ENST00000348286 ATAD2BQ9ULI0 1458 aa18.29■□□□□ 0.52
DNMT3B-203ENST00000348286 CUX2O14529 1486 aa18.28■□□□□ 0.52
DNMT3B-203ENST00000348286 CARMIL1Q5VZK9 1371 aa18.26■□□□□ 0.51
DNMT3B-203ENST00000348286 CCNB3Q8WWL7 1395 aa18.26■□□□□ 0.51
DNMT3B-203ENST00000348286 SMARCA2P51531 1590 aa18.26■□□□□ 0.51
DNMT3B-203ENST00000348286 HNRNPUQ00839 825 aaKnown RBP eCLIP18.23■□□□□ 0.51
DNMT3B-203ENST00000348286 CDK11AQ9UQ88 783 aaPredicted RBP18.22■□□□□ 0.51
DNMT3B-203ENST00000348286 FAM9BQ8IZU0 186 aa18.18■□□□□ 0.5
DNMT3B-203ENST00000348286 CLSPNQ9HAW4 1339 aa18.15■□□□□ 0.5
DNMT3B-203ENST00000348286 SLC4A1APQ9BWU0 796 aaKnown RBP18.12■□□□□ 0.49
DNMT3B-203ENST00000348286 IRX6P78412 446 aaPredicted RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms