RNA–Protein interactions for RNA: ENST00000264705.8

CAD-201, Transcript of carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAD, Length 7,265 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAD-201ENST00000264705 DCAF8L2P0C7V8 631 aa21.79■■□□□ 1.08
CAD-201ENST00000264705 SUPT5HO00267 1087 aaKnown RBP20.21■□□□□ 0.83
CAD-201ENST00000264705 EHMT2Q96KQ7 1210 aa20.17■□□□□ 0.82
CAD-201ENST00000264705 SHROOM4Q9ULL8 1493 aa19.83■□□□□ 0.77
CAD-201ENST00000264705 NISCHQ9Y2I1 1504 aa19.68■□□□□ 0.74
CAD-201ENST00000264705 PELP1Q8IZL8 1130 aaKnown RBP19.61■□□□□ 0.73
CAD-201ENST00000264705 FAM9AQ8IZU1 332 aaPredicted RBP19.59■□□□□ 0.73
CAD-201ENST00000264705 APLP2Q06481 763 aa19.58■□□□□ 0.73
CAD-201ENST00000264705 TTBK1Q5TCY1 1321 aaPredicted RBP19.41■□□□□ 0.7
CAD-201ENST00000264705 RANGAP1P46060 587 aaPredicted RBP19.29■□□□□ 0.68
CAD-201ENST00000264705 ATP1B4Q9UN42 357 aaPredicted RBP19.24■□□□□ 0.67
CAD-201ENST00000264705 ERICH6Q7L0X2 663 aa19.01■□□□□ 0.63
CAD-201ENST00000264705 PCGF6Q9BYE7 350 aa18.88■□□□□ 0.61
CAD-201ENST00000264705 MYT1LQ9UL68 1186 aa18.82■□□□□ 0.6
CAD-201ENST00000264705 CCER1Q8TC90 406 aaPredicted RBP18.77■□□□□ 0.6
CAD-201ENST00000264705 TRIM41Q8WV44 630 aa18.71■□□□□ 0.59
CAD-201ENST00000264705 CENPBP07199 599 aaPredicted RBP18.66■□□□□ 0.58
CAD-201ENST00000264705 UBTFP17480 764 aaKnown RBP18.66■□□□□ 0.58
CAD-201ENST00000264705 CHIC1Q5VXU3 224 aa18.65■□□□□ 0.58
CAD-201ENST00000264705 ZEB1P37275 1124 aaPredicted RBP18.56■□□□□ 0.56
CAD-201ENST00000264705 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.49■□□□□ 0.55
CAD-201ENST00000264705 HNRNPUL2Q1KMD3 747 aaKnown RBP18.49■□□□□ 0.55
CAD-201ENST00000264705 NEFLP07196 543 aa18.48■□□□□ 0.55
CAD-201ENST00000264705 POLR3GLQ9BT43 218 aa18.47■□□□□ 0.55
CAD-201ENST00000264705 YTHDC1Q96MU7 727 aaKnown RBP18.4■□□□□ 0.54
CAD-201ENST00000264705 SLC4A1APQ9BWU0 796 aaKnown RBP18.37■□□□□ 0.53
CAD-201ENST00000264705 CNGB1Q14028 1251 aaPredicted RBP18.33■□□□□ 0.52
CAD-201ENST00000264705 PPARGC1BQ86YN6 1023 aaKnown RBP18.26■□□□□ 0.51
CAD-201ENST00000264705 MYT1Q01538 1121 aa18.25■□□□□ 0.51
CAD-201ENST00000264705 ITGAEP38570 1179 aa18.23■□□□□ 0.51
CAD-201ENST00000264705 DAXXQ9UER7 740 aaPredicted RBP18.23■□□□□ 0.51
CAD-201ENST00000264705 TRIM26Q12899 539 aaPredicted RBP17.91■□□□□ 0.46
CAD-201ENST00000264705 SLC24A1O60721 1099 aa17.9■□□□□ 0.46
CAD-201ENST00000264705 CLSPNQ9HAW4 1339 aa17.86■□□□□ 0.45
CAD-201ENST00000264705 BCANQ96GW7 911 aa17.79■□□□□ 0.44
CAD-201ENST00000264705 ZNF316A6NFI3 1004 aaPredicted RBP17.77■□□□□ 0.43
CAD-201ENST00000264705 BCL11AQ9H165 835 aa17.76■□□□□ 0.43
CAD-201ENST00000264705 FAM50AQ14320 339 aaKnown RBP17.68■□□□□ 0.42
CAD-201ENST00000264705 FBLN2P98095 1184 aa17.66■□□□□ 0.42
CAD-201ENST00000264705 PLPPR3Q6T4P5 718 aa17.65■□□□□ 0.42
CAD-201ENST00000264705 LOC105371045A0A1W2PR82 267 aa17.65■□□□□ 0.42
CAD-201ENST00000264705 TRIM52Q96A61 297 aa17.65■□□□□ 0.42
CAD-201ENST00000264705 HRCP23327 699 aa17.64■□□□□ 0.41
CAD-201ENST00000264705 ZBTB47Q9UFB7 747 aaPredicted RBP17.6■□□□□ 0.41
CAD-201ENST00000264705 ZNF326Q5BKZ1 582 aaKnown RBP17.56■□□□□ 0.4
CAD-201ENST00000264705 RTL5Q5HYW3 569 aaPredicted RBP17.5■□□□□ 0.39
CAD-201ENST00000264705 PABPN1Q86U42 306 aaKnown RBP eCLIP17.5■□□□□ 0.395e-7■□□□□ 11
CAD-201ENST00000264705 NEUROD1Q13562 356 aa17.49■□□□□ 0.39
CAD-201ENST00000264705 ABCC9O60706 1549 aa17.42■□□□□ 0.38
CAD-201ENST00000264705 CANXP27824 592 aaKnown RBP17.4■□□□□ 0.38
CAD-201ENST00000264705 DIEXFQ68CQ4 756 aaKnown RBP17.38■□□□□ 0.37
CAD-201ENST00000264705 ESF1Q9H501 851 aaKnown RBP17.38■□□□□ 0.37
CAD-201ENST00000264705 ARID3CA6NKF2 412 aa17.37■□□□□ 0.37
CAD-201ENST00000264705 NEFMP07197 916 aa17.37■□□□□ 0.37
CAD-201ENST00000264705 ANP32CO43423 234 aa17.29■□□□□ 0.36
CAD-201ENST00000264705 STAG3Q9UJ98 1225 aa17.26■□□□□ 0.35
CAD-201ENST00000264705 A0A0G2JS52 829 aa17.25■□□□□ 0.35
CAD-201ENST00000264705 SCAF1Q9H7N4 1312 aaKnown RBP17.24■□□□□ 0.35
CAD-201ENST00000264705 ZNF777Q9ULD5 760 aaPredicted RBP17.2■□□□□ 0.34
CAD-201ENST00000264705 CHGAP10645 457 aaKnown RBP17.19■□□□□ 0.34
CAD-201ENST00000264705 P3H3Q8IVL6 736 aa17.16■□□□□ 0.34
CAD-201ENST00000264705 CDK11AQ9UQ88 783 aaPredicted RBP17.15■□□□□ 0.34
CAD-201ENST00000264705 PLEKHG5O94827 1062 aa17.11■□□□□ 0.33
CAD-201ENST00000264705 ZBTB7CA1YPR0 619 aa17.02■□□□□ 0.31
CAD-201ENST00000264705 NPM1P06748 294 aaKnown RBP eCLIP17.01■□□□□ 0.31
CAD-201ENST00000264705 SENP3Q9H4L4 574 aaPredicted RBP16.97■□□□□ 0.31
CAD-201ENST00000264705 NPM2Q86SE8 214 aaKnown RBP16.94■□□□□ 0.3
CAD-201ENST00000264705 GTF3C3Q9Y5Q9 886 aa16.93■□□□□ 0.3
CAD-201ENST00000264705 HSP90AA1P07900 732 aaKnown RBP16.92■□□□□ 0.3
CAD-201ENST00000264705 ANP32AP39687 249 aaKnown RBP16.9■□□□□ 0.3
CAD-201ENST00000264705 C14orf37Q86TY3 774 aa16.88■□□□□ 0.29
CAD-201ENST00000264705 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.86■□□□□ 0.292e-7■□□□□ 10.9
CAD-201ENST00000264705 CSRNP3Q8WYN3 585 aa16.83■□□□□ 0.28
CAD-201ENST00000264705 CDK11BP21127 795 aaKnown RBP16.81■□□□□ 0.28
CAD-201ENST00000264705 HAP1P54257 671 aaPredicted RBP16.81■□□□□ 0.28
CAD-201ENST00000264705 SALL2Q9Y467 1007 aaPredicted RBP16.81■□□□□ 0.28
CAD-201ENST00000264705 ANP32BQ92688 251 aaKnown RBP16.81■□□□□ 0.28
CAD-201ENST00000264705 TULP1O00294 542 aaPredicted RBP16.8■□□□□ 0.28
CAD-201ENST00000264705 TONSLQ96HA7 1378 aa16.8■□□□□ 0.28
CAD-201ENST00000264705 ARXQ96QS3 562 aa16.77■□□□□ 0.27
CAD-201ENST00000264705 UPF2Q9HAU5 1272 aaKnown RBP16.76■□□□□ 0.27
CAD-201ENST00000264705 SCRIBQ14160 1630 aa16.73■□□□□ 0.27
CAD-201ENST00000264705 FAM9BQ8IZU0 186 aa16.7■□□□□ 0.26
CAD-201ENST00000264705 ARID4BQ4LE39 1312 aaPredicted RBP16.68■□□□□ 0.26
CAD-201ENST00000264705 CHIC2Q9UKJ5 165 aa16.68■□□□□ 0.26
CAD-201ENST00000264705 WDR43Q15061 677 aaKnown RBP eCLIP16.66■□□□□ 0.26
CAD-201ENST00000264705 PPP1R15AO75807 674 aaPredicted RBP16.66■□□□□ 0.26
CAD-201ENST00000264705 HNRNPUQ00839 825 aaKnown RBP eCLIP16.65■□□□□ 0.26
CAD-201ENST00000264705 FKBP8Q14318 412 aa16.63■□□□□ 0.25
CAD-201ENST00000264705 KDM2AQ9Y2K7 1162 aa16.63■□□□□ 0.25
CAD-201ENST00000264705 NPHP1O15259 732 aa16.63■□□□□ 0.25
CAD-201ENST00000264705 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.62■□□□□ 0.25
CAD-201ENST00000264705 TMC1Q8TDI8 760 aa16.62■□□□□ 0.25
CAD-201ENST00000264705 TSPY4P0CV99 314 aa16.6■□□□□ 0.25
CAD-201ENST00000264705 TSPY10P0CW01 314 aa16.6■□□□□ 0.25
CAD-201ENST00000264705 CHMP7Q8WUX9 453 aaPredicted RBP16.59■□□□□ 0.25
CAD-201ENST00000264705 DDX10Q13206 875 aaKnown RBP16.58■□□□□ 0.25
CAD-201ENST00000264705 MYH16Q9H6N6 1097 aa16.56■□□□□ 0.24
CAD-201ENST00000264705 EIF5BO60841 1220 aaKnown RBP16.55■□□□□ 0.24
CAD-201ENST00000264705 ACIN1Q9UKV3 1341 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms