RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 NISCHQ9Y2I1 1504 aa21.7■■□□□ 1.06
DNMT3B-201ENST00000201963 DCAF8L2P0C7V8 631 aa20.98■□□□□ 0.95
DNMT3B-201ENST00000201963 SHROOM4Q9ULL8 1493 aa19.47■□□□□ 0.71
DNMT3B-201ENST00000201963 ABCC9O60706 1549 aa19.38■□□□□ 0.69
DNMT3B-201ENST00000201963 SUPT5HO00267 1087 aaKnown RBP19.13■□□□□ 0.65
DNMT3B-201ENST00000201963 PABPN1Q86U42 306 aaKnown RBP eCLIP18.82■□□□□ 0.6
DNMT3B-201ENST00000201963 PCGF6Q9BYE7 350 aa18.62■□□□□ 0.57
DNMT3B-201ENST00000201963 CCDC180Q9P1Z9 1646 aa18.29■□□□□ 0.52
DNMT3B-201ENST00000201963 EHMT2Q96KQ7 1210 aa18.27■□□□□ 0.52
DNMT3B-201ENST00000201963 HRCP23327 699 aa18.22■□□□□ 0.51
DNMT3B-201ENST00000201963 PELP1Q8IZL8 1130 aaKnown RBP18.2■□□□□ 0.5
DNMT3B-201ENST00000201963 PPARGC1BQ86YN6 1023 aaKnown RBP17.99■□□□□ 0.47
DNMT3B-201ENST00000201963 SCRIBQ14160 1630 aa17.98■□□□□ 0.47
DNMT3B-201ENST00000201963 FAM9AQ8IZU1 332 aaPredicted RBP17.95■□□□□ 0.46
DNMT3B-201ENST00000201963 ZCCHC6Q5VYS8 1495 aaKnown RBP17.92■□□□□ 0.46
DNMT3B-201ENST00000201963 ZEB1P37275 1124 aaPredicted RBP17.91■□□□□ 0.46
DNMT3B-201ENST00000201963 RB1CC1Q8TDY2 1594 aa17.89■□□□□ 0.45
DNMT3B-201ENST00000201963 CENPBP07199 599 aaPredicted RBP17.83■□□□□ 0.45
DNMT3B-201ENST00000201963 TTBK1Q5TCY1 1321 aaPredicted RBP17.76■□□□□ 0.43
DNMT3B-201ENST00000201963 RANGAP1P46060 587 aaPredicted RBP17.72■□□□□ 0.43
DNMT3B-201ENST00000201963 TRIM26Q12899 539 aaPredicted RBP17.7■□□□□ 0.42
DNMT3B-201ENST00000201963 CCER1Q8TC90 406 aaPredicted RBP17.7■□□□□ 0.42
DNMT3B-201ENST00000201963 MYT1Q01538 1121 aa17.7■□□□□ 0.42
DNMT3B-201ENST00000201963 CHIC1Q5VXU3 224 aa17.7■□□□□ 0.42
DNMT3B-201ENST00000201963 NACADO15069 1562 aa17.69■□□□□ 0.42
DNMT3B-201ENST00000201963 LOC105371045A0A1W2PR82 267 aa17.66■□□□□ 0.42
DNMT3B-201ENST00000201963 TRIM41Q8WV44 630 aa17.58■□□□□ 0.4
DNMT3B-201ENST00000201963 YTHDC1Q96MU7 727 aaKnown RBP17.56■□□□□ 0.4
DNMT3B-201ENST00000201963 APLP2Q06481 763 aa17.37■□□□□ 0.37
DNMT3B-201ENST00000201963 ATP1B4Q9UN42 357 aaPredicted RBP17.36■□□□□ 0.37
DNMT3B-201ENST00000201963 FBLN2P98095 1184 aa17.35■□□□□ 0.37
DNMT3B-201ENST00000201963 UBTFP17480 764 aaKnown RBP17.28■□□□□ 0.36
DNMT3B-201ENST00000201963 CECR2Q9BXF3 1484 aa17.24■□□□□ 0.35
DNMT3B-201ENST00000201963 DCAF1Q9Y4B6 1507 aa17.22■□□□□ 0.35
DNMT3B-201ENST00000201963 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.2■□□□□ 0.34
DNMT3B-201ENST00000201963 GTF3C3Q9Y5Q9 886 aa17.2■□□□□ 0.34
DNMT3B-201ENST00000201963 DIEXFQ68CQ4 756 aaKnown RBP17.18■□□□□ 0.34
DNMT3B-201ENST00000201963 DNAJC5BQ9UF47 199 aa17.15■□□□□ 0.34
DNMT3B-201ENST00000201963 ERICH6Q7L0X2 663 aa17.14■□□□□ 0.33
DNMT3B-201ENST00000201963 BAZ1BQ9UIG0 1483 aaKnown RBP17.08■□□□□ 0.33
DNMT3B-201ENST00000201963 HNRNPUL2Q1KMD3 747 aaKnown RBP17.05■□□□□ 0.32
DNMT3B-201ENST00000201963 ACIN1Q9UKV3 1341 aaKnown RBP17.05■□□□□ 0.32
DNMT3B-201ENST00000201963 ERCC6Q03468 1493 aa17.03■□□□□ 0.32
DNMT3B-201ENST00000201963 RSF1Q96T23 1441 aaPredicted RBP17.03■□□□□ 0.32
DNMT3B-201ENST00000201963 SCAF1Q9H7N4 1312 aaKnown RBP17.01■□□□□ 0.31
DNMT3B-201ENST00000201963 MYO15BQ96JP2 1530 aa17.01■□□□□ 0.31
DNMT3B-201ENST00000201963 NEFLP07196 543 aa16.99■□□□□ 0.31
DNMT3B-201ENST00000201963 BAZ1AQ9NRL2 1556 aaPredicted RBP16.92■□□□□ 0.3
DNMT3B-201ENST00000201963 MROH2BQ7Z745 1585 aa16.91■□□□□ 0.3
DNMT3B-201ENST00000201963 NEUROD1Q13562 356 aa16.85■□□□□ 0.29
DNMT3B-201ENST00000201963 ARID3CA6NKF2 412 aa16.84■□□□□ 0.29
DNMT3B-201ENST00000201963 P3H3Q8IVL6 736 aa16.79■□□□□ 0.28
DNMT3B-201ENST00000201963 MYT1LQ9UL68 1186 aa16.79■□□□□ 0.28
DNMT3B-201ENST00000201963 CHMP7Q8WUX9 453 aaPredicted RBP16.75■□□□□ 0.27
DNMT3B-201ENST00000201963 EIF4G1Q04637 1599 aaKnown RBP16.74■□□□□ 0.27
DNMT3B-201ENST00000201963 ATAD2BQ9ULI0 1458 aa16.74■□□□□ 0.27
DNMT3B-201ENST00000201963 ZNF316A6NFI3 1004 aaPredicted RBP16.71■□□□□ 0.27
DNMT3B-201ENST00000201963 SMARCA2P51531 1590 aa16.7■□□□□ 0.26
DNMT3B-201ENST00000201963 ITGAEP38570 1179 aa16.67■□□□□ 0.26
DNMT3B-201ENST00000201963 BCANQ96GW7 911 aa16.67■□□□□ 0.26
DNMT3B-201ENST00000201963 WIZO95785 1651 aa16.64■□□□□ 0.25
DNMT3B-201ENST00000201963 BICRAQ9NZM4 1560 aa16.64■□□□□ 0.25
DNMT3B-201ENST00000201963 CC2D2AQ9P2K1 1620 aa16.63■□□□□ 0.25
DNMT3B-201ENST00000201963 PDS5BQ9NTI5 1447 aa16.6■□□□□ 0.25
DNMT3B-201ENST00000201963 SMARCA4P51532 1647 aa16.6■□□□□ 0.25
DNMT3B-201ENST00000201963 CSRNP3Q8WYN3 585 aa16.58■□□□□ 0.25
DNMT3B-201ENST00000201963 CADPSQ9ULU8 1353 aa16.57■□□□□ 0.24
DNMT3B-201ENST00000201963 CCDC88BA6NC98 1476 aa16.57■□□□□ 0.24
DNMT3B-201ENST00000201963 TDRD9Q8NDG6 1382 aaKnown RBP16.49■□□□□ 0.23
DNMT3B-201ENST00000201963 NESP48681 1621 aa16.48■□□□□ 0.23
DNMT3B-201ENST00000201963 WRNQ14191 1432 aaPredicted RBP eCLIP16.48■□□□□ 0.23
DNMT3B-201ENST00000201963 NPM1P06748 294 aaKnown RBP eCLIP16.47■□□□□ 0.23
DNMT3B-201ENST00000201963 NCAPD3P42695 1498 aa16.45■□□□□ 0.22
DNMT3B-201ENST00000201963 UNC13AQ9UPW8 1703 aa16.41■□□□□ 0.22
DNMT3B-201ENST00000201963 MIER1Q8N108 512 aa16.39■□□□□ 0.21
DNMT3B-201ENST00000201963 TRHP20396 242 aaPredicted RBP16.39■□□□□ 0.21
DNMT3B-201ENST00000201963 CEP164Q9UPV0 1460 aa16.38■□□□□ 0.21
DNMT3B-201ENST00000201963 TOP2AP11388 1531 aaKnown RBP16.38■□□□□ 0.21
DNMT3B-201ENST00000201963 FANCD2Q9BXW9 1451 aa16.37■□□□□ 0.21
DNMT3B-201ENST00000201963 CNGB1Q14028 1251 aaPredicted RBP16.33■□□□□ 0.21
DNMT3B-201ENST00000201963 PLPPR3Q6T4P5 718 aa16.33■□□□□ 0.21
DNMT3B-201ENST00000201963 SOGA1O94964 1423 aa16.33■□□□□ 0.21
DNMT3B-201ENST00000201963 CUX2O14529 1486 aa16.32■□□□□ 0.2
DNMT3B-201ENST00000201963 ABCC8Q09428 1581 aa16.3■□□□□ 0.2
DNMT3B-201ENST00000201963 KCNH8Q96L42 1107 aa16.3■□□□□ 0.2
DNMT3B-201ENST00000201963 ZNF777Q9ULD5 760 aaPredicted RBP16.3■□□□□ 0.2
DNMT3B-201ENST00000201963 RTL5Q5HYW3 569 aaPredicted RBP16.29■□□□□ 0.2
DNMT3B-201ENST00000201963 FKBP8Q14318 412 aa16.27■□□□□ 0.2
DNMT3B-201ENST00000201963 POLR3GLQ9BT43 218 aa16.25■□□□□ 0.19
DNMT3B-201ENST00000201963 FAM50AQ14320 339 aaKnown RBP16.25■□□□□ 0.19
DNMT3B-201ENST00000201963 CDK11AQ9UQ88 783 aaPredicted RBP16.25■□□□□ 0.19
DNMT3B-201ENST00000201963 KIF27Q86VH2 1401 aa16.24■□□□□ 0.19
DNMT3B-201ENST00000201963 CYB5RLQ6IPT4 315 aa16.23■□□□□ 0.19
DNMT3B-201ENST00000201963 CLSPNQ9HAW4 1339 aa16.23■□□□□ 0.19
DNMT3B-201ENST00000201963 ANP32CO43423 234 aa16.2■□□□□ 0.18
DNMT3B-201ENST00000201963 OSCARQ8IYS5 282 aa16.2■□□□□ 0.18
DNMT3B-201ENST00000201963 DAXXQ9UER7 740 aaPredicted RBP16.18■□□□□ 0.18
DNMT3B-201ENST00000201963 RAD54L2Q9Y4B4 1467 aa16.14■□□□□ 0.17
DNMT3B-201ENST00000201963 CARMIL1Q5VZK9 1371 aa16.13■□□□□ 0.17
DNMT3B-201ENST00000201963 ANP32EQ9BTT0 268 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms