Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RCCD1A6NED2 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RCCD1A6NED2 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RCCD1A6NED2 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RCCD1A6NED2 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.29■□□□□ 0.2
RCCD1A6NED2 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RCCD1A6NED2 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCCD1A6NED2 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCCD1A6NED2 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCCD1A6NED2 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCCD1A6NED2 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RCCD1A6NED2 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RCCD1A6NED2 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC16.29■□□□□ 0.2
RCCD1A6NED2 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCCD1A6NED2 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RCCD1A6NED2 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RCCD1A6NED2 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCCD1A6NED2 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.29■□□□□ 0.2
RCCD1A6NED2 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.29■□□□□ 0.2
RCCD1A6NED2 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.29■□□□□ 0.2
RCCD1A6NED2 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
RCCD1A6NED2 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RCCD1A6NED2 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCCD1A6NED2 AL360270.3-201ENST00000609118 1348 ntBASIC16.29■□□□□ 0.2
RCCD1A6NED2 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RCCD1A6NED2 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCCD1A6NED2 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RCCD1A6NED2 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RCCD1A6NED2 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RCCD1A6NED2 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.29■□□□□ 0.2
RCCD1A6NED2 AP000344.2-201ENST00000512987 629 ntBASIC16.29■□□□□ 0.2
RCCD1A6NED2 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC16.29■□□□□ 0.2
RCCD1A6NED2 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RCCD1A6NED2 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.29■□□□□ 0.2
RCCD1A6NED2 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.29■□□□□ 0.2
RCCD1A6NED2 AP001059.3-201ENST00000619053 235 ntBASIC16.29■□□□□ 0.2
RCCD1A6NED2 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.29■□□□□ 0.2
RCCD1A6NED2 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RCCD1A6NED2 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCCD1A6NED2 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.29■□□□□ 0.2
RCCD1A6NED2 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RCCD1A6NED2 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCCD1A6NED2 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCCD1A6NED2 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCCD1A6NED2 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RCCD1A6NED2 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RCCD1A6NED2 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RCCD1A6NED2 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
RCCD1A6NED2 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RCCD1A6NED2 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCCD1A6NED2 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCCD1A6NED2 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RCCD1A6NED2 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RCCD1A6NED2 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCCD1A6NED2 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RCCD1A6NED2 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RCCD1A6NED2 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCCD1A6NED2 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCCD1A6NED2 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCCD1A6NED2 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RCCD1A6NED2 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCCD1A6NED2 AC079781.5-202ENST00000641784 3743 ntBASIC16.28■□□□□ 0.2
RCCD1A6NED2 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCCD1A6NED2 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCCD1A6NED2 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RCCD1A6NED2 AL354702.1-201ENST00000442006 1960 ntBASIC16.28■□□□□ 0.2
RCCD1A6NED2 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCCD1A6NED2 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCCD1A6NED2 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCCD1A6NED2 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCCD1A6NED2 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RCCD1A6NED2 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.28■□□□□ 0.2
RCCD1A6NED2 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.28■□□□□ 0.2
RCCD1A6NED2 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.28■□□□□ 0.2
RCCD1A6NED2 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.28■□□□□ 0.2
RCCD1A6NED2 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RCCD1A6NED2 AC010336.2-201ENST00000564226 506 ntBASIC16.28■□□□□ 0.2
RCCD1A6NED2 SAMD11P1-201ENST00000571429 661 ntBASIC16.28■□□□□ 0.2
RCCD1A6NED2 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.28■□□□□ 0.2
RCCD1A6NED2 AC004835.2-201ENST00000603762 682 ntBASIC16.28■□□□□ 0.2
RCCD1A6NED2 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCCD1A6NED2 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RCCD1A6NED2 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.28■□□□□ 0.2
RCCD1A6NED2 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCCD1A6NED2 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCCD1A6NED2 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCCD1A6NED2 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.28■□□□□ 0.2
RCCD1A6NED2 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RCCD1A6NED2 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC16.28■□□□□ 0.2
RCCD1A6NED2 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.28■□□□□ 0.2
RCCD1A6NED2 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.28■□□□□ 0.2
RCCD1A6NED2 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCCD1A6NED2 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCCD1A6NED2 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RCCD1A6NED2 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RCCD1A6NED2 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC16.27■□□□□ 0.2
RCCD1A6NED2 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RCCD1A6NED2 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
RCCD1A6NED2 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RCCD1A6NED2 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms