RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 NISCHQ9Y2I1 1504 aa35.56■■■■□ 3.28
PRPF3-201ENST00000324862 CCDC180Q9P1Z9 1646 aa31.07■■■□□ 2.56
PRPF3-201ENST00000324862 ABCC9O60706 1549 aa30.03■■■□□ 2.4
PRPF3-201ENST00000324862 ZCCHC6Q5VYS8 1495 aaKnown RBP29.77■■■□□ 2.36
PRPF3-201ENST00000324862 DCAF8L2P0C7V8 631 aa29.72■■■□□ 2.35
PRPF3-201ENST00000324862 DCAF1Q9Y4B6 1507 aa29.28■■■□□ 2.28
PRPF3-201ENST00000324862 NACADO15069 1562 aa29.09■■■□□ 2.25
PRPF3-201ENST00000324862 MYO15BQ96JP2 1530 aa29.07■■■□□ 2.24
PRPF3-201ENST00000324862 RB1CC1Q8TDY2 1594 aa28.96■■■□□ 2.23
PRPF3-201ENST00000324862 SHROOM4Q9ULL8 1493 aa28.92■■■□□ 2.22
PRPF3-201ENST00000324862 SCRIBQ14160 1630 aa28.71■■■□□ 2.19
PRPF3-201ENST00000324862 UNC13AQ9UPW8 1703 aa28.4■■■□□ 2.14
PRPF3-201ENST00000324862 PABPN1Q86U42 306 aaKnown RBP eCLIP28.31■■■□□ 2.12
PRPF3-201ENST00000324862 BICRAQ9NZM4 1560 aa28.19■■■□□ 2.1
PRPF3-201ENST00000324862 CECR2Q9BXF3 1484 aa27.79■■■□□ 2.04
PRPF3-201ENST00000324862 SUPT5HO00267 1087 aaKnown RBP27.58■■■□□ 2.01
PRPF3-201ENST00000324862 MROH2BQ7Z745 1585 aa27.53■■■□□ 2
PRPF3-201ENST00000324862 RSF1Q96T23 1441 aaPredicted RBP27.47■■□□□ 1.99
PRPF3-201ENST00000324862 BAZ1AQ9NRL2 1556 aaPredicted RBP27.45■■□□□ 1.98
PRPF3-201ENST00000324862 SMARCA4P51532 1647 aa27.41■■□□□ 1.98
PRPF3-201ENST00000324862 EIF4G1Q04637 1599 aaKnown RBP27.37■■□□□ 1.97
PRPF3-201ENST00000324862 WIZO95785 1651 aa27.26■■□□□ 1.95
PRPF3-201ENST00000324862 ATAD2BQ9ULI0 1458 aa27.11■■□□□ 1.93
PRPF3-201ENST00000324862 CC2D2AQ9P2K1 1620 aa27.09■■□□□ 1.93
PRPF3-201ENST00000324862 PEG3Q9GZU2 1588 aa27.04■■□□□ 1.92
PRPF3-201ENST00000324862 DNAJC5BQ9UF47 199 aa27■■□□□ 1.91
PRPF3-201ENST00000324862 SMARCA2P51531 1590 aa26.99■■□□□ 1.91
PRPF3-201ENST00000324862 BAZ1BQ9UIG0 1483 aaKnown RBP26.92■■□□□ 1.9
PRPF3-201ENST00000324862 NCAPD3P42695 1498 aa26.91■■□□□ 1.9
PRPF3-201ENST00000324862 TOP2AP11388 1531 aaKnown RBP26.88■■□□□ 1.89
PRPF3-201ENST00000324862 HMGXB3Q12766 1538 aa26.79■■□□□ 1.88
PRPF3-201ENST00000324862 CCDC88BA6NC98 1476 aa26.69■■□□□ 1.86
PRPF3-201ENST00000324862 NESP48681 1621 aa26.25■■□□□ 1.79
PRPF3-201ENST00000324862 CADPSQ9ULU8 1353 aa26.23■■□□□ 1.79
PRPF3-201ENST00000324862 CFTRP13569 1480 aa26.21■■□□□ 1.79
PRPF3-201ENST00000324862 CHIC1Q5VXU3 224 aa26.1■■□□□ 1.77
PRPF3-201ENST00000324862 ABCC8Q09428 1581 aa26.04■■□□□ 1.76
PRPF3-201ENST00000324862 LAMC3Q9Y6N6 1575 aa26.02■■□□□ 1.76
PRPF3-201ENST00000324862 FANCD2Q9BXW9 1451 aa25.95■■□□□ 1.74
PRPF3-201ENST00000324862 PRDM2Q13029 1718 aa25.89■■□□□ 1.74
PRPF3-201ENST00000324862 PDS5BQ9NTI5 1447 aa25.87■■□□□ 1.73
PRPF3-201ENST00000324862 TRIM41Q8WV44 630 aa25.87■■□□□ 1.73
PRPF3-201ENST00000324862 WRNQ14191 1432 aaPredicted RBP eCLIP25.85■■□□□ 1.73
PRPF3-201ENST00000324862 KIF21AQ7Z4S6 1674 aa25.81■■□□□ 1.72
PRPF3-201ENST00000324862 CEP164Q9UPV0 1460 aa25.8■■□□□ 1.72
PRPF3-201ENST00000324862 SYNJ1O43426 1573 aa25.78■■□□□ 1.72
PRPF3-201ENST00000324862 CUX1P39880 1505 aa25.75■■□□□ 1.71
PRPF3-201ENST00000324862 ERCC6Q03468 1493 aa25.73■■□□□ 1.71
PRPF3-201ENST00000324862 URB2Q14146 1524 aaKnown RBP25.68■■□□□ 1.7
PRPF3-201ENST00000324862 TOP2BQ02880 1626 aa25.63■■□□□ 1.69
PRPF3-201ENST00000324862 TOPBP1Q92547 1522 aa25.61■■□□□ 1.69
PRPF3-201ENST00000324862 MRC2Q9UBG0 1479 aa25.58■■□□□ 1.69
PRPF3-201ENST00000324862 BIVM-ERCC5R4GMW8 1640 aa25.58■■□□□ 1.68
PRPF3-201ENST00000324862 DNMBPQ6XZF7 1577 aa25.57■■□□□ 1.68
PRPF3-201ENST00000324862 FGD5Q6ZNL6 1462 aa25.53■■□□□ 1.68
PRPF3-201ENST00000324862 FAM9AQ8IZU1 332 aaPredicted RBP25.52■■□□□ 1.68
PRPF3-201ENST00000324862 THOC2Q8NI27 1593 aaKnown RBP25.5■■□□□ 1.67
PRPF3-201ENST00000324862 POLA1P09884 1462 aaPredicted RBP25.48■■□□□ 1.67
PRPF3-201ENST00000324862 SOGA1O94964 1423 aa25.47■■□□□ 1.67
PRPF3-201ENST00000324862 RAD54L2Q9Y4B4 1467 aa25.46■■□□□ 1.67
PRPF3-201ENST00000324862 WDR62O43379 1518 aa25.45■■□□□ 1.66
PRPF3-201ENST00000324862 RUSC2Q8N2Y8 1516 aa25.43■■□□□ 1.66
PRPF3-201ENST00000324862 CUX2O14529 1486 aa25.35■■□□□ 1.65
PRPF3-201ENST00000324862 EHMT2Q96KQ7 1210 aa25.28■■□□□ 1.64
PRPF3-201ENST00000324862 TDRD9Q8NDG6 1382 aaKnown RBP25.26■■□□□ 1.63
PRPF3-201ENST00000324862 ABCA10Q8WWZ4 1543 aa25.24■■□□□ 1.63
PRPF3-201ENST00000324862 TARBP1Q13395 1621 aaKnown RBP25.24■■□□□ 1.63
PRPF3-201ENST00000324862 KIF27Q86VH2 1401 aa25.2■■□□□ 1.62
PRPF3-201ENST00000324862 ZNF608Q9ULD9 1512 aaPredicted RBP25.2■■□□□ 1.62
PRPF3-201ENST00000324862 LOC105371045A0A1W2PR82 267 aa25.19■■□□□ 1.62
PRPF3-201ENST00000324862 IFT140Q96RY7 1462 aa25.18■■□□□ 1.62
PRPF3-201ENST00000324862 CSRNP3Q8WYN3 585 aa25.17■■□□□ 1.62
PRPF3-201ENST00000324862 AQRO60306 1485 aaKnown RBP eCLIP25.16■■□□□ 1.621e-9■■■■■ 33.1
PRPF3-201ENST00000324862 WDR97A6NE52 1622 aa25.16■■□□□ 1.62
PRPF3-201ENST00000324862 EEA1Q15075 1411 aa25.12■■□□□ 1.61
PRPF3-201ENST00000324862 IGF1RP08069 1367 aa25.09■■□□□ 1.61
PRPF3-201ENST00000324862 GAPVD1Q14C86 1478 aa25.08■■□□□ 1.61
PRPF3-201ENST00000324862 ABCA5Q8WWZ7 1642 aa25.06■■□□□ 1.6
PRPF3-201ENST00000324862 EIF4G3O43432 1585 aaKnown RBP25.01■■□□□ 1.59
PRPF3-201ENST00000324862 RAPGEF2Q9Y4G8 1499 aa24.94■■□□□ 1.58
PRPF3-201ENST00000324862 PRXQ9BXM0 1461 aa24.94■■□□□ 1.58
PRPF3-201ENST00000324862 CARMIL1Q5VZK9 1371 aa24.93■■□□□ 1.58
PRPF3-201ENST00000324862 GRIN2BQ13224 1484 aa24.92■■□□□ 1.58
PRPF3-201ENST00000324862 ERICH3Q5RHP9 1530 aa24.9■■□□□ 1.58
PRPF3-201ENST00000324862 PBRM1Q86U86 1689 aa24.9■■□□□ 1.58
PRPF3-201ENST00000324862 SNAPC4Q5SXM2 1469 aa24.87■■□□□ 1.57
PRPF3-201ENST00000324862 UBTFP17480 764 aaKnown RBP24.86■■□□□ 1.57
PRPF3-201ENST00000324862 KIF21BO75037 1637 aa24.85■■□□□ 1.57
PRPF3-201ENST00000324862 GOLGA3Q08378 1498 aa24.84■■□□□ 1.57
PRPF3-201ENST00000324862 CUL7Q14999 1698 aa24.79■■□□□ 1.56
PRPF3-201ENST00000324862 FBLN2P98095 1184 aa24.78■■□□□ 1.56
PRPF3-201ENST00000324862 ADAMTS12P58397 1594 aa24.78■■□□□ 1.56
PRPF3-201ENST00000324862 FHAD1B1AJZ9 1412 aa24.77■■□□□ 1.56
PRPF3-201ENST00000324862 RANGAP1P46060 587 aaPredicted RBP24.74■■□□□ 1.55
PRPF3-201ENST00000324862 MAGI1Q96QZ7 1491 aaPredicted RBP24.73■■□□□ 1.55
PRPF3-201ENST00000324862 CHMP7Q8WUX9 453 aaPredicted RBP24.71■■□□□ 1.55
PRPF3-201ENST00000324862 TNIKQ9UKE5 1360 aa24.68■■□□□ 1.54
PRPF3-201ENST00000324862 SYNJ2O15056 1496 aa24.67■■□□□ 1.54
PRPF3-201ENST00000324862 GRIN2AQ12879 1464 aa24.64■■□□□ 1.53
PRPF3-201ENST00000324862 CEP162Q5TB80 1403 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms