Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC27.13■■□□□ 1.93
SMARCC2Q8TAQ2 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SMARCC2Q8TAQ2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC27.13■■□□□ 1.93
SMARCC2Q8TAQ2 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC27.13■■□□□ 1.93
SMARCC2Q8TAQ2 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC27.13■■□□□ 1.93
SMARCC2Q8TAQ2 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC27.12■■□□□ 1.93
SMARCC2Q8TAQ2 AC009299.2-201ENST00000482477 511 ntBASIC27.12■■□□□ 1.93
SMARCC2Q8TAQ2 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SMARCC2Q8TAQ2 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
SMARCC2Q8TAQ2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SMARCC2Q8TAQ2 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SMARCC2Q8TAQ2 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC27.11■■□□□ 1.93
SMARCC2Q8TAQ2 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
SMARCC2Q8TAQ2 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SMARCC2Q8TAQ2 AC090877.2-201ENST00000558441 1738 ntBASIC27.11■■□□□ 1.93
SMARCC2Q8TAQ2 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC27.11■■□□□ 1.93
SMARCC2Q8TAQ2 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
SMARCC2Q8TAQ2 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SMARCC2Q8TAQ2 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC27.11■■□□□ 1.93
SMARCC2Q8TAQ2 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SMARCC2Q8TAQ2 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC27.1■■□□□ 1.93
SMARCC2Q8TAQ2 PRTG-204ENST00000561292 833 ntTSL 3 BASIC27.1■■□□□ 1.93
SMARCC2Q8TAQ2 SHD-204ENST00000599689 1729 ntTSL 5 BASIC27.1■■□□□ 1.93
SMARCC2Q8TAQ2 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
SMARCC2Q8TAQ2 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SMARCC2Q8TAQ2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC27.09■■□□□ 1.93
SMARCC2Q8TAQ2 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC27.09■■□□□ 1.93
SMARCC2Q8TAQ2 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC27.09■■□□□ 1.93
SMARCC2Q8TAQ2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
SMARCC2Q8TAQ2 TK2-216ENST00000564917 1156 ntTSL 3 BASIC27.08■■□□□ 1.93
SMARCC2Q8TAQ2 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
SMARCC2Q8TAQ2 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC27.07■■□□□ 1.92
SMARCC2Q8TAQ2 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
SMARCC2Q8TAQ2 KRT18P24-201ENST00000344739 1156 ntBASIC27.07■■□□□ 1.92
SMARCC2Q8TAQ2 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
SMARCC2Q8TAQ2 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC27.07■■□□□ 1.92
SMARCC2Q8TAQ2 THA1P-201ENST00000590384 1145 ntBASIC27.07■■□□□ 1.92
SMARCC2Q8TAQ2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
SMARCC2Q8TAQ2 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC27.07■■□□□ 1.92
SMARCC2Q8TAQ2 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
SMARCC2Q8TAQ2 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SMARCC2Q8TAQ2 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SMARCC2Q8TAQ2 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC27.06■■□□□ 1.92
SMARCC2Q8TAQ2 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC27.05■■□□□ 1.92
SMARCC2Q8TAQ2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC27.05■■□□□ 1.92
SMARCC2Q8TAQ2 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC27.05■■□□□ 1.92
SMARCC2Q8TAQ2 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
SMARCC2Q8TAQ2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
SMARCC2Q8TAQ2 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC27.05■■□□□ 1.92
SMARCC2Q8TAQ2 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC27.05■■□□□ 1.92
SMARCC2Q8TAQ2 AC120024.1-201ENST00000562672 995 ntBASIC27.05■■□□□ 1.92
SMARCC2Q8TAQ2 SSSCA1-AS1-201ENST00000567594 614 ntBASIC27.05■■□□□ 1.92
SMARCC2Q8TAQ2 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
SMARCC2Q8TAQ2 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
SMARCC2Q8TAQ2 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
SMARCC2Q8TAQ2 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
SMARCC2Q8TAQ2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
SMARCC2Q8TAQ2 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
SMARCC2Q8TAQ2 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC27.04■■□□□ 1.92
SMARCC2Q8TAQ2 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
SMARCC2Q8TAQ2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC27.04■■□□□ 1.92
SMARCC2Q8TAQ2 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
SMARCC2Q8TAQ2 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
SMARCC2Q8TAQ2 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
SMARCC2Q8TAQ2 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
SMARCC2Q8TAQ2 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
SMARCC2Q8TAQ2 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC27.02■■□□□ 1.92
SMARCC2Q8TAQ2 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
SMARCC2Q8TAQ2 RNF146-205ENST00000477776 762 ntTSL 3 BASIC27.02■■□□□ 1.92
SMARCC2Q8TAQ2 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
SMARCC2Q8TAQ2 ABCB10P4-201ENST00000566803 2184 ntBASIC27.02■■□□□ 1.92
SMARCC2Q8TAQ2 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
SMARCC2Q8TAQ2 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC27.02■■□□□ 1.92
SMARCC2Q8TAQ2 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
SMARCC2Q8TAQ2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
SMARCC2Q8TAQ2 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
SMARCC2Q8TAQ2 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
SMARCC2Q8TAQ2 TRIR-205ENST00000592273 783 ntTSL 3 BASIC27.01■■□□□ 1.91
SMARCC2Q8TAQ2 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
SMARCC2Q8TAQ2 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
SMARCC2Q8TAQ2 RARA-203ENST00000394086 2008 ntTSL 2 BASIC27■■□□□ 1.91
SMARCC2Q8TAQ2 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC27■■□□□ 1.91
SMARCC2Q8TAQ2 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC27■■□□□ 1.91
SMARCC2Q8TAQ2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
SMARCC2Q8TAQ2 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC27■■□□□ 1.91
SMARCC2Q8TAQ2 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
SMARCC2Q8TAQ2 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
SMARCC2Q8TAQ2 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
SMARCC2Q8TAQ2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC27■■□□□ 1.91
SMARCC2Q8TAQ2 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
SMARCC2Q8TAQ2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
SMARCC2Q8TAQ2 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SMARCC2Q8TAQ2 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
SMARCC2Q8TAQ2 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
SMARCC2Q8TAQ2 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SMARCC2Q8TAQ2 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
SMARCC2Q8TAQ2 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC26.99■■□□□ 1.91
SMARCC2Q8TAQ2 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
SMARCC2Q8TAQ2 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
SMARCC2Q8TAQ2 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms