Protein–RNA interactions for Protein: Q8IWS0

PHF6, PHD finger protein 6, humanhuman

Known RBP eCLIP

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF6Q8IWS0 LINC01089-203ENST00000535614 480 ntTSL 420.41■□□□□ 0.862e-6■■■□□ 17
PHF6Q8IWS0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.39■□□□□ 0.852e-6■■■□□ 17
PHF6Q8IWS0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.772e-6■■■□□ 17
PHF6Q8IWS0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.48■□□□□ 0.712e-6■■■□□ 17
PHF6Q8IWS0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.23■□□□□ 0.672e-6■■■□□ 17
PHF6Q8IWS0 FHL3-205ENST00000485803 1468 ntTSL 1 (best)18.77■□□□□ 0.592e-6■■■□□ 17
PHF6Q8IWS0 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.38■□□□□ 0.532e-6■■■□□ 17
PHF6Q8IWS0 RHOF-206ENST00000545544 826 ntTSL 518.26■□□□□ 0.512e-6■■■□□ 17
PHF6Q8IWS0 RHOF-205ENST00000541657 1626 ntTSL 518.07■□□□□ 0.482e-6■■■□□ 17
PHF6Q8IWS0 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.472e-6■■■□□ 17
PHF6Q8IWS0 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.58■□□□□ 0.42e-6■■■□□ 17
PHF6Q8IWS0 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.75■□□□□ 0.272e-6■■■□□ 17
PHF6Q8IWS0 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.262e-6■■■□□ 17
PHF6Q8IWS0 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.172e-6■■■□□ 17
PHF6Q8IWS0 LINC01089-204ENST00000535643 1014 ntTSL 1 (best)15.99■□□□□ 0.152e-6■■■□□ 17
PHF6Q8IWS0 MFSD2B-204ENST00000469562 2613 ntTSL 1 (best)15.6■□□□□ 0.092e-6■■■□□ 17
PHF6Q8IWS0 OTUB1-201ENST00000301453 2493 ntTSL 215.6■□□□□ 0.092e-6■■■□□ 17
PHF6Q8IWS0 LINC01089-208ENST00000541694 875 ntTSL 215.53■□□□□ 0.082e-6■■■□□ 17
PHF6Q8IWS0 ATXN2L-218ENST00000565971 3264 ntTSL 1 (best)14.7□□□□□ -0.062e-6■■■□□ 17
PHF6Q8IWS0 SSBP3-210ENST00000525990 701 ntTSL 213.89□□□□□ -0.192e-6■■■□□ 17
PHF6Q8IWS0 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.252e-6■■■□□ 17
PHF6Q8IWS0 MFSD2B-205ENST00000495018 1156 ntTSL 1 (best)13.38□□□□□ -0.272e-6■■■□□ 17
PHF6Q8IWS0 LINC01089-212ENST00000545885 559 ntTSL 212.51□□□□□ -0.412e-6■■■□□ 17
PHF6Q8IWS0 LINC01089-205ENST00000536662 560 ntTSL 4 BASIC12.18□□□□□ -0.462e-6■■■□□ 17
PHF6Q8IWS0 RNU6-36P-201ENST00000384172 107 ntBASIC4.51□□□□□ -1.692e-6■■■□□ 17
PHF6Q8IWS0 TMC6-209ENST00000588087 2384 ntTSL 220.63■□□□□ 0.891e-6■■■□□ 17
PHF6Q8IWS0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.08■□□□□ 0.81e-6■■■□□ 17
PHF6Q8IWS0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.36■□□□□ 0.691e-6■■■□□ 17
PHF6Q8IWS0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.31e-6■■■□□ 17
PHF6Q8IWS0 TMC6-224ENST00000593044 3070 ntTSL 215.3■□□□□ 0.041e-6■■■□□ 17
PHF6Q8IWS0 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.031e-6■■■□□ 17
PHF6Q8IWS0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.761e-6■■■□□ 16.9
PHF6Q8IWS0 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.13■□□□□ 0.491e-6■■■□□ 16.9
PHF6Q8IWS0 TMC6-211ENST00000589271 1099 ntTSL 518.63■□□□□ 0.576e-7■■■□□ 16.9
PHF6Q8IWS0 PFKL-207ENST00000474114 6007 ntTSL 1 (best)17.52■□□□□ 0.46e-7■■■□□ 16.8
PHF6Q8IWS0 U8.4-201ENST00000363626 134 ntBASIC6.45□□□□□ -1.385e-85■■■□□ 16.8
PHF6Q8IWS0 SNHG22-202ENST00000615535 421 nt18.96■□□□□ 0.631e-10■■■□□ 16.7
PHF6Q8IWS0 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.5■□□□□ 0.391e-10■■■□□ 16.7
PHF6Q8IWS0 RPL23A-209ENST00000582736 595 ntTSL 1 (best)18.57■□□□□ 0.562e-24■■■□□ 16.6
PHF6Q8IWS0 SNORD42B-201ENST00000458893 67 ntBASIC1.18□□□□□ -2.222e-24■■■□□ 16.6
PHF6Q8IWS0 IRF3-220ENST00000598108 1118 ntTSL 325.17■■□□□ 1.628e-8■■■□□ 16.6
PHF6Q8IWS0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.23■■□□□ 1.318e-8■■■□□ 16.6
PHF6Q8IWS0 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.19■■□□□ 1.38e-8■■■□□ 16.6
PHF6Q8IWS0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC23.12■■□□□ 1.298e-8■■■□□ 16.6
PHF6Q8IWS0 IRF3-231ENST00000602190 413 ntTSL 322.4■■□□□ 1.188e-8■■■□□ 16.6
PHF6Q8IWS0 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.21■■□□□ 1.158e-8■■■□□ 16.6
PHF6Q8IWS0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.078e-8■■■□□ 16.6
PHF6Q8IWS0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.61■■□□□ 1.058e-8■■■□□ 16.6
PHF6Q8IWS0 IRF3-209ENST00000595034 739 ntTSL 321.41■■□□□ 1.028e-8■■■□□ 16.6
PHF6Q8IWS0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.32■□□□□ 0.848e-8■■■□□ 16.6
PHF6Q8IWS0 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.48e-8■■■□□ 16.6
PHF6Q8IWS0 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.4■□□□□ 0.388e-8■■■□□ 16.6
PHF6Q8IWS0 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.378e-8■■■□□ 16.6
PHF6Q8IWS0 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC16.37■□□□□ 0.218e-8■■■□□ 16.6
PHF6Q8IWS0 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.23■□□□□ 0.198e-8■■■□□ 16.6
PHF6Q8IWS0 IRF3-212ENST00000596756 931 ntTSL 516.14■□□□□ 0.178e-8■■■□□ 16.6
PHF6Q8IWS0 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC14.77□□□□□ -0.058e-8■■■□□ 16.6
PHF6Q8IWS0 IRF3-219ENST00000597636 2874 ntTSL 514.75□□□□□ -0.058e-8■■■□□ 16.6
PHF6Q8IWS0 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.383e-7■■■□□ 16.6
PHF6Q8IWS0 LARP1-211ENST00000521577 817 ntTSL 526.36■■□□□ 1.816e-7■■■□□ 16.5
PHF6Q8IWS0 LARP1-208ENST00000518892 399 ntTSL 323.49■■□□□ 1.356e-7■■■□□ 16.5
PHF6Q8IWS0 LARP1-210ENST00000519931 569 ntTSL 47.87□□□□□ -1.156e-7■■■□□ 16.5
PHF6Q8IWS0 LARP1-202ENST00000517616 501 ntTSL 54.92□□□□□ -1.626e-7■■■□□ 16.5
PHF6Q8IWS0 RPL4-217ENST00000569696 569 ntTSL 513.7□□□□□ -0.225e-35■■■□□ 16.5
PHF6Q8IWS0 RPL4-214ENST00000567229 2003 ntTSL 511.87□□□□□ -0.515e-35■■■□□ 16.5
PHF6Q8IWS0 RPL4-215ENST00000568588 1864 ntTSL 2 BASIC11.7□□□□□ -0.545e-35■■■□□ 16.5
PHF6Q8IWS0 RPL4-210ENST00000566039 1099 ntTSL 210.47□□□□□ -0.735e-35■■■□□ 16.5
PHF6Q8IWS0 RPL4-201ENST00000307961 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.755e-35■■■□□ 16.5
PHF6Q8IWS0 RPL4-203ENST00000561775 1396 ntTSL 57.86□□□□□ -1.155e-35■■■□□ 16.5
PHF6Q8IWS0 ABHD17A-206ENST00000592757 740 ntTSL 323.42■■□□□ 1.349e-7■■■□□ 16.4
PHF6Q8IWS0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.473e-6■■■□□ 16.4
PHF6Q8IWS0 SEMA4C-202ENST00000442264 817 ntTSL 322.78■■□□□ 1.243e-7■■■□□ 16.4
PHF6Q8IWS0 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.142e-6■■■□□ 16.4
PHF6Q8IWS0 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.53■□□□□ 0.882e-9■■■□□ 16.3
PHF6Q8IWS0 AKAP6-202ENST00000553547 2274 ntTSL 28.85□□□□□ -0.992e-9■■■□□ 16.3
PHF6Q8IWS0 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.39□□□□□ -1.392e-9■■■□□ 16.3
PHF6Q8IWS0 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.29□□□□□ -1.562e-9■■■□□ 16.3
PHF6Q8IWS0 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.752e-9■■■□□ 16.3
PHF6Q8IWS0 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.97■□□□□ 0.631e-6■■■□□ 16.3
PHF6Q8IWS0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.581e-6■■■□□ 16.3
PHF6Q8IWS0 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.15■□□□□ 0.51e-6■■■□□ 16.3
PHF6Q8IWS0 RBM14-RBM4-202ENST00000421355 2034 ntTSL 218.13■□□□□ 0.491e-6■■■□□ 16.3
PHF6Q8IWS0 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 01e-6■■■□□ 16.3
PHF6Q8IWS0 RBM14-205ENST00000443702 732 ntTSL 3 BASIC14.74□□□□□ -0.051e-6■■■□□ 16.3
PHF6Q8IWS0 RBM14-RBM4-204ENST00000511114 523 ntTSL 413.77□□□□□ -0.211e-6■■■□□ 16.3
PHF6Q8IWS0 RBM14-203ENST00000409372 876 ntTSL 2 BASIC13.77□□□□□ -0.211e-6■■■□□ 16.3
PHF6Q8IWS0 SEPT5-207ENST00000431044 3173 ntTSL 1 (best)15.55■□□□□ 0.081e-6■■■□□ 16.3
PHF6Q8IWS0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.742e-7■■■□□ 16.2
PHF6Q8IWS0 PRSS21-208ENST00000575199 679 ntTSL 223.7■■□□□ 1.382e-7■■■□□ 16.2
PHF6Q8IWS0 PRSS21-203ENST00000570594 809 ntTSL 322.38■■□□□ 1.172e-7■■■□□ 16.2
PHF6Q8IWS0 PRSS21-207ENST00000574813 873 ntTSL 320.6■□□□□ 0.892e-7■■■□□ 16.2
PHF6Q8IWS0 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.57■□□□□ 0.882e-7■■■□□ 16.2
PHF6Q8IWS0 PRSS21-210ENST00000577043 814 ntTSL 520.32■□□□□ 0.842e-7■■■□□ 16.2
PHF6Q8IWS0 PRSS21-206ENST00000574265 860 ntTSL 314.35□□□□□ -0.112e-7■■■□□ 16.2
PHF6Q8IWS0 PRSS21-204ENST00000570629 626 ntTSL 213.72□□□□□ -0.212e-7■■■□□ 16.2
PHF6Q8IWS0 MT-TH-201ENST00000387441 69 ntBASIC7.03□□□□□ -1.281e-323■■■□□ 16.2
PHF6Q8IWS0 CPNE7-205ENST00000529800 519 ntTSL 513.58□□□□□ -0.242e-6■■■□□ 16.1
PHF6Q8IWS0 KMT5A-207ENST00000478781 725 ntTSL 532.06■■■□□ 2.729e-8■■■□□ 16.1
PHF6Q8IWS0 NAP1L4-203ENST00000430811 860 ntTSL 229.44■■■□□ 2.39e-7■■■□□ 16.1
PHF6Q8IWS0 PTMA-206ENST00000412128 863 ntTSL 328.13■■■□□ 2.091e-8■■■□□ 16.1
Retrieved 100 of 4,170 protein–RNA pairs in 141.9 ms