RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-231ENST00000602190 NISCHQ9Y2I1 1504 aa47.04■■■■■ 5.12
IRF3-231ENST00000602190 ABCC9O60706 1549 aa42.6■■■■■ 4.41
IRF3-231ENST00000602190 CCDC180Q9P1Z9 1646 aa42.49■■■■■ 4.39
IRF3-231ENST00000602190 RB1CC1Q8TDY2 1594 aa40.51■■■■■ 4.08
IRF3-231ENST00000602190 DNAJC5BQ9UF47 199 aa40.37■■■■■ 4.05
IRF3-231ENST00000602190 NACADO15069 1562 aa40.19■■■■■ 4.02
IRF3-231ENST00000602190 UNC13AQ9UPW8 1703 aa39.7■■■■□ 3.95
IRF3-231ENST00000602190 MYO15BQ96JP2 1530 aa39.65■■■■□ 3.94
IRF3-231ENST00000602190 PABPN1Q86U42 306 aaKnown RBP eCLIP39.49■■■■□ 3.913e-7■□□□□ 10.7
IRF3-231ENST00000602190 BICRAQ9NZM4 1560 aa39.46■■■■□ 3.91
IRF3-231ENST00000602190 DCAF8L2P0C7V8 631 aa39.39■■■■□ 3.9
IRF3-231ENST00000602190 DCAF1Q9Y4B6 1507 aa38.97■■■■□ 3.83
IRF3-231ENST00000602190 ZCCHC6Q5VYS8 1495 aaKnown RBP38.95■■■■□ 3.83
IRF3-231ENST00000602190 SHROOM4Q9ULL8 1493 aa38.95■■■■□ 3.83
IRF3-231ENST00000602190 CC2D2AQ9P2K1 1620 aa38.58■■■■□ 3.77
IRF3-231ENST00000602190 SCRIBQ14160 1630 aa38.47■■■■□ 3.75
IRF3-231ENST00000602190 CECR2Q9BXF3 1484 aa38.47■■■■□ 3.75
IRF3-231ENST00000602190 EIF4G1Q04637 1599 aaKnown RBP38.44■■■■□ 3.74
IRF3-231ENST00000602190 DNAJC5Q9H3Z4 198 aa37.37■■■■□ 3.57
IRF3-231ENST00000602190 NCAPD3P42695 1498 aa37.12■■■■□ 3.53
IRF3-231ENST00000602190 CUX2O14529 1486 aa37.03■■■■□ 3.52
IRF3-231ENST00000602190 ATAD2BQ9ULI0 1458 aa36.9■■■■□ 3.5
IRF3-231ENST00000602190 HMGXB3Q12766 1538 aa36.84■■■■□ 3.49
IRF3-231ENST00000602190 SMARCA4P51532 1647 aa36.78■■■■□ 3.48
IRF3-231ENST00000602190 SMARCA2P51531 1590 aa36.78■■■■□ 3.48
IRF3-231ENST00000602190 ERCC6Q03468 1493 aa36.75■■■■□ 3.47
IRF3-231ENST00000602190 PEG3Q9GZU2 1588 aa36.57■■■■□ 3.44
IRF3-231ENST00000602190 NESP48681 1621 aa36.54■■■■□ 3.44
IRF3-231ENST00000602190 BAZ1AQ9NRL2 1556 aaPredicted RBP36.53■■■■□ 3.44
IRF3-231ENST00000602190 BAZ1BQ9UIG0 1483 aaKnown RBP36.43■■■■□ 3.42
IRF3-231ENST00000602190 THOC2Q8NI27 1593 aaKnown RBP36.4■■■■□ 3.42
IRF3-231ENST00000602190 LAMC3Q9Y6N6 1575 aa36.33■■■■□ 3.41
IRF3-231ENST00000602190 MROH2BQ7Z745 1585 aa36.21■■■■□ 3.39
IRF3-231ENST00000602190 KIF21AQ7Z4S6 1674 aa36.13■■■■□ 3.37
IRF3-231ENST00000602190 PDS5BQ9NTI5 1447 aa36.02■■■■□ 3.36
IRF3-231ENST00000602190 CADPSQ9ULU8 1353 aa35.88■■■■□ 3.33
IRF3-231ENST00000602190 WDR62O43379 1518 aa35.79■■■■□ 3.32
IRF3-231ENST00000602190 MRC2Q9UBG0 1479 aa35.78■■■■□ 3.32
IRF3-231ENST00000602190 WIZO95785 1651 aa35.73■■■■□ 3.31
IRF3-231ENST00000602190 CEP164Q9UPV0 1460 aa35.52■■■■□ 3.28
IRF3-231ENST00000602190 CFTRP13569 1480 aa35.47■■■■□ 3.27
IRF3-231ENST00000602190 FANCD2Q9BXW9 1451 aa35.45■■■■□ 3.27
IRF3-231ENST00000602190 RSF1Q96T23 1441 aaPredicted RBP35.31■■■■□ 3.24
IRF3-231ENST00000602190 TOP2AP11388 1531 aaKnown RBP35.3■■■■□ 3.24
IRF3-231ENST00000602190 TRIM41Q8WV44 630 aa35.29■■■■□ 3.24
IRF3-231ENST00000602190 URB2Q14146 1524 aaKnown RBP35.25■■■■□ 3.23
IRF3-231ENST00000602190 PRDM2Q13029 1718 aa35.14■■■■□ 3.22
IRF3-231ENST00000602190 OSCARQ8IYS5 282 aa35.09■■■■□ 3.21
IRF3-231ENST00000602190 IFT140Q96RY7 1462 aa34.86■■■■□ 3.17
IRF3-231ENST00000602190 CCDC88BA6NC98 1476 aa34.84■■■■□ 3.17
IRF3-231ENST00000602190 ZNF608Q9ULD9 1512 aaPredicted RBP34.83■■■■□ 3.17
IRF3-231ENST00000602190 RIMBP3CA6NJZ7 1639 aa34.82■■■■□ 3.16
IRF3-231ENST00000602190 RIMBP3BA6NNM3 1639 aa34.82■■■■□ 3.16
IRF3-231ENST00000602190 RIMBP3Q9UFD9 1639 aa34.82■■■■□ 3.16
IRF3-231ENST00000602190 TOPBP1Q92547 1522 aa34.78■■■■□ 3.16
IRF3-231ENST00000602190 ABCC8Q09428 1581 aa34.68■■■■□ 3.14
IRF3-231ENST00000602190 EIF4G3O43432 1585 aaKnown RBP34.66■■■■□ 3.14
IRF3-231ENST00000602190 ARHGEF11O15085 1522 aa34.66■■■■□ 3.14
IRF3-231ENST00000602190 DNMBPQ6XZF7 1577 aa34.64■■■■□ 3.14
IRF3-231ENST00000602190 TARBP1Q13395 1621 aaKnown RBP34.59■■■■□ 3.13
IRF3-231ENST00000602190 CHD1O14646 1710 aa34.47■■■■□ 3.11
IRF3-231ENST00000602190 POLA1P09884 1462 aaPredicted RBP34.4■■■■□ 3.1
IRF3-231ENST00000602190 AQRO60306 1485 aaKnown RBP eCLIP34.39■■■■□ 3.15e-7■■□□□ 12.4
IRF3-231ENST00000602190 ARAP1Q96P48 1450 aa34.32■■■■□ 3.08
IRF3-231ENST00000602190 WDR97A6NE52 1622 aa34.26■■■■□ 3.07
IRF3-231ENST00000602190 CYB5RLQ6IPT4 315 aa34.21■■■■□ 3.07
IRF3-231ENST00000602190 RAD54L2Q9Y4B4 1467 aa34.2■■■■□ 3.06
IRF3-231ENST00000602190 CLASP1Q7Z460 1538 aa34.14■■■■□ 3.06
IRF3-231ENST00000602190 SOGA1O94964 1423 aa34.14■■■■□ 3.06
IRF3-231ENST00000602190 TDRD9Q8NDG6 1382 aaKnown RBP34.1■■■■□ 3.05
IRF3-231ENST00000602190 FGD5Q6ZNL6 1462 aa34.09■■■■□ 3.05
IRF3-231ENST00000602190 SNAPC4Q5SXM2 1469 aa34.07■■■■□ 3.05
IRF3-231ENST00000602190 MAGI1Q96QZ7 1491 aaPredicted RBP34.05■■■■□ 3.04
IRF3-231ENST00000602190 CUX1P39880 1505 aa34.04■■■■□ 3.04
IRF3-231ENST00000602190 FBLN2P98095 1184 aa34.02■■■■□ 3.04
IRF3-231ENST00000602190 SYNJ1O43426 1573 aa33.98■■■■□ 3.03
IRF3-231ENST00000602190 GRIN2BQ13224 1484 aa33.95■■■■□ 3.03
IRF3-231ENST00000602190 SYNJ2O15056 1496 aa33.91■■■■□ 3.02
IRF3-231ENST00000602190 TRHP20396 242 aaPredicted RBP33.85■■■■□ 3.01
IRF3-231ENST00000602190 PBRM1Q86U86 1689 aa33.84■■■■□ 3.01
IRF3-231ENST00000602190 CHMP7Q8WUX9 453 aaPredicted RBP33.81■■■■□ 3
IRF3-231ENST00000602190 ABCA5Q8WWZ7 1642 aa33.79■■■■□ 3
IRF3-231ENST00000602190 ABCA10Q8WWZ4 1543 aa33.76■■■■□ 3
IRF3-231ENST00000602190 GAPVD1Q14C86 1478 aa33.76■■■□□ 2.99
IRF3-231ENST00000602190 GRIN2AQ12879 1464 aa33.54■■■□□ 2.96
IRF3-231ENST00000602190 ADAMTS12P58397 1594 aa33.51■■■□□ 2.96
IRF3-231ENST00000602190 NUP160Q12769 1436 aa33.51■■■□□ 2.95
IRF3-231ENST00000602190 ERCC6L2Q5T890 1561 aa33.5■■■□□ 2.95
IRF3-231ENST00000602190 BIVM-ERCC5R4GMW8 1640 aa33.47■■■□□ 2.95
IRF3-231ENST00000602190 CEP170Q5SW79 1584 aa33.47■■■□□ 2.95
IRF3-231ENST00000602190 SHROOM2Q13796 1616 aa33.46■■■□□ 2.95
IRF3-231ENST00000602190 WRNQ14191 1432 aaPredicted RBP eCLIP33.43■■■□□ 2.94
IRF3-231ENST00000602190 TOP2BQ02880 1626 aa33.42■■■□□ 2.94
IRF3-231ENST00000602190 FHAD1B1AJZ9 1412 aa33.34■■■□□ 2.93
IRF3-231ENST00000602190 ERICH3Q5RHP9 1530 aa33.33■■■□□ 2.93
IRF3-231ENST00000602190 KIF13AQ9H1H9 1805 aa33.18■■■□□ 2.9
IRF3-231ENST00000602190 AEBP2Q6ZN18 517 aaPredicted RBP33.12■■■□□ 2.89
IRF3-231ENST00000602190 SUPT5HO00267 1087 aaKnown RBP33.1■■■□□ 2.89
IRF3-231ENST00000602190 RUSC2Q8N2Y8 1516 aa33.07■■■□□ 2.88
IRF3-231ENST00000602190 PRG4Q92954 1404 aaPredicted RBP33.06■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms