RNA–Protein interactions for RNA: ENST00000458893.1

SNORD42B-201, Transcript of small nucleolar RNA, C/D box 42B, humanhuman

BASIC

Gene SNORD42B, Length 67 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42B-201ENST00000458893 AEBP2Q6ZN18 517 aaPredicted RBP6.39□□□□□ -1.39
SNORD42B-201ENST00000458893 CHIC1Q5VXU3 224 aa6.12□□□□□ -1.43
SNORD42B-201ENST00000458893 SENP3Q9H4L4 574 aaPredicted RBP5.64□□□□□ -1.51
SNORD42B-201ENST00000458893 POTEDQ86YR6 584 aa5.61□□□□□ -1.51
SNORD42B-201ENST00000458893 PHF23Q9BUL5 403 aaPredicted RBP5.48□□□□□ -1.53
SNORD42B-201ENST00000458893 FOXD1Q16676 465 aa5.23□□□□□ -1.57
SNORD42B-201ENST00000458893 MSH5O43196 834 aa5.14□□□□□ -1.59
SNORD42B-201ENST00000458893 PIAS4Q8N2W9 510 aaPredicted RBP4.86□□□□□ -1.63
SNORD42B-201ENST00000458893 CACNB1Q02641 598 aaPredicted RBP4.67□□□□□ -1.66
SNORD42B-201ENST00000458893 ADRA2BP18089 450 aa4.56□□□□□ -1.68
SNORD42B-201ENST00000458893 PPP6R1Q9UPN7 881 aa4.55□□□□□ -1.68
SNORD42B-201ENST00000458893 PLPPR3Q6T4P5 718 aa4.48□□□□□ -1.69
SNORD42B-201ENST00000458893 DMRT2Q9Y5R5 561 aa4.36□□□□□ -1.71
SNORD42B-201ENST00000458893 POTEHQ6S545 545 aa4.35□□□□□ -1.71
SNORD42B-201ENST00000458893 DCAF8L1A6NGE4 600 aa4.32□□□□□ -1.72
SNORD42B-201ENST00000458893 SCAF1Q9H7N4 1312 aaKnown RBP4.3□□□□□ -1.72
SNORD42B-201ENST00000458893 MAPK8IP2Q13387 824 aaPredicted RBP4.29□□□□□ -1.72
SNORD42B-201ENST00000458893 RNF39Q9H2S5 420 aa4.28□□□□□ -1.72
SNORD42B-201ENST00000458893 C1QBPQ07021 282 aaKnown RBP4.25□□□□□ -1.73
SNORD42B-201ENST00000458893 HOXD11P31277 338 aaPredicted RBP4.04□□□□□ -1.76
SNORD42B-201ENST00000458893 DNAJC5BQ9UF47 199 aa3.99□□□□□ -1.77
SNORD42B-201ENST00000458893 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.95□□□□□ -1.78
SNORD42B-201ENST00000458893 RNF216Q9NWF9 866 aaPredicted RBP3.94□□□□□ -1.78
SNORD42B-201ENST00000458893 SP7Q8TDD2 431 aaPredicted RBP3.9□□□□□ -1.79
SNORD42B-201ENST00000458893 CAPN15O75808 1086 aa3.89□□□□□ -1.79
SNORD42B-201ENST00000458893 CNKSR2Q8WXI2 1034 aa3.89□□□□□ -1.79
SNORD42B-201ENST00000458893 DSG3P32926 999 aa3.87□□□□□ -1.79
SNORD42B-201ENST00000458893 PPP4R3CPQ6ZMV5 832 aa3.85□□□□□ -1.79
SNORD42B-201ENST00000458893 CHRDL2Q6WN34 429 aa3.83□□□□□ -1.8
SNORD42B-201ENST00000458893 PLSCR2Q9NRY7 297 aa3.83□□□□□ -1.8
SNORD42B-201ENST00000458893 RBM42Q9BTD8 480 aaKnown RBP3.81□□□□□ -1.8
SNORD42B-201ENST00000458893 SPINK5Q9NQ38 1064 aaPredicted RBP3.79□□□□□ -1.8
SNORD42B-201ENST00000458893 HAX1O00165 279 aa3.74□□□□□ -1.81
SNORD42B-201ENST00000458893 APLP2Q06481 763 aa3.74□□□□□ -1.81
SNORD42B-201ENST00000458893 ABCB7O75027 752 aa3.73□□□□□ -1.81
SNORD42B-201ENST00000458893 TRHP20396 242 aaPredicted RBP3.73□□□□□ -1.81
SNORD42B-201ENST00000458893 U3KPZ7 1027 aaPredicted RBP3.72□□□□□ -1.81
SNORD42B-201ENST00000458893 ZNF219Q9P2Y4 722 aaPredicted RBP3.71□□□□□ -1.82
SNORD42B-201ENST00000458893 NCBP3Q53F19 620 aaKnown RBP3.67□□□□□ -1.82
SNORD42B-201ENST00000458893 LHX8Q68G74 356 aa3.67□□□□□ -1.82
SNORD42B-201ENST00000458893 PIP4P2Q8N4L2 257 aa3.63□□□□□ -1.83
SNORD42B-201ENST00000458893 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.6□□□□□ -1.83
SNORD42B-201ENST00000458893 HNRNPUL2Q1KMD3 747 aaKnown RBP3.6□□□□□ -1.83
SNORD42B-201ENST00000458893 AKT1S1Q96B36 256 aa3.59□□□□□ -1.83
SNORD42B-201ENST00000458893 EVX2Q03828 476 aa3.53□□□□□ -1.84
SNORD42B-201ENST00000458893 SAMD1Q6SPF0 538 aaPredicted RBP3.53□□□□□ -1.84
SNORD42B-201ENST00000458893 REM2Q8IYK8 340 aaPredicted RBP3.53□□□□□ -1.84
SNORD42B-201ENST00000458893 FXR2P51116 673 aaKnown RBP eCLIP3.52□□□□□ -1.85
SNORD42B-201ENST00000458893 POLA2Q14181 598 aa3.51□□□□□ -1.85
SNORD42B-201ENST00000458893 NPM3O75607 178 aaKnown RBP3.5□□□□□ -1.85
SNORD42B-201ENST00000458893 GABBR2O75899 941 aa3.5□□□□□ -1.85
SNORD42B-201ENST00000458893 PITPNM1O00562 1244 aa3.49□□□□□ -1.85
SNORD42B-201ENST00000458893 POTEMA6NI47 508 aa3.48□□□□□ -1.85
SNORD42B-201ENST00000458893 PCDH10Q9P2E7 1040 aa3.48□□□□□ -1.85
SNORD42B-201ENST00000458893 ZBTB12Q9Y330 459 aaPredicted RBP3.46□□□□□ -1.86
SNORD42B-201ENST00000458893 POTEGQ6S5H5 508 aa3.45□□□□□ -1.86
SNORD42B-201ENST00000458893 C19orf67A6NJJ6 358 aa3.43□□□□□ -1.86
SNORD42B-201ENST00000458893 PRKAR2AP13861 404 aaKnown RBP3.43□□□□□ -1.86
SNORD42B-201ENST00000458893 DCBLD2Q96PD2 775 aa3.41□□□□□ -1.86
SNORD42B-201ENST00000458893 SLC4A2P04920 1241 aa3.4□□□□□ -1.87
SNORD42B-201ENST00000458893 CLEC11AQ9Y240 323 aa3.39□□□□□ -1.87
SNORD42B-201ENST00000458893 CLCN6P51797 869 aa3.38□□□□□ -1.87
SNORD42B-201ENST00000458893 OSCARQ8IYS5 282 aa3.38□□□□□ -1.87
SNORD42B-201ENST00000458893 POTEIP0CG38 1075 aa3.35□□□□□ -1.87
SNORD42B-201ENST00000458893 SPDYE1Q8NFV5 336 aaPredicted RBP3.34□□□□□ -1.87
SNORD42B-201ENST00000458893 OTUD5Q96G74 571 aa3.34□□□□□ -1.87
SNORD42B-201ENST00000458893 MYCNP04198 464 aaPredicted RBP3.31□□□□□ -1.88
SNORD42B-201ENST00000458893 CD44P16070 742 aaKnown RBP3.3□□□□□ -1.88
SNORD42B-201ENST00000458893 FAM163AQ96GL9 167 aaPredicted RBP3.3□□□□□ -1.88
SNORD42B-201ENST00000458893 CHADLQ6NUI6 762 aa3.29□□□□□ -1.88
SNORD42B-201ENST00000458893 SPDYE2BA6NHP3 402 aa3.28□□□□□ -1.88
SNORD42B-201ENST00000458893 SPDYE6P0CI01 402 aa3.28□□□□□ -1.88
SNORD42B-201ENST00000458893 SPDYE2Q495Y8 402 aa3.28□□□□□ -1.88
SNORD42B-201ENST00000458893 PRR29P0C7W0 189 aa3.27□□□□□ -1.89
SNORD42B-201ENST00000458893 MAMSTRQ6ZN01 415 aa3.27□□□□□ -1.89
SNORD42B-201ENST00000458893 CDAN1Q8IWY9 1227 aa3.25□□□□□ -1.89
SNORD42B-201ENST00000458893 POTEB2H3BUK9 544 aa3.23□□□□□ -1.89
SNORD42B-201ENST00000458893 SCUBE2Q9NQ36 999 aa3.23□□□□□ -1.89
SNORD42B-201ENST00000458893 FBLN2P98095 1184 aa3.22□□□□□ -1.89
SNORD42B-201ENST00000458893 ZRANB1Q9UGI0 708 aa3.21□□□□□ -1.9
SNORD42B-201ENST00000458893 FARP1Q9Y4F1 1045 aaPredicted RBP3.21□□□□□ -1.9
SNORD42B-201ENST00000458893 ZNF579Q8NAF0 562 aaKnown RBP3.2□□□□□ -1.9
SNORD42B-201ENST00000458893 ZNF692Q9BU19 519 aaPredicted RBP3.2□□□□□ -1.9
SNORD42B-201ENST00000458893 MMRN1Q13201 1228 aa3.19□□□□□ -1.9
SNORD42B-201ENST00000458893 GALR2O43603 387 aaPredicted RBP3.18□□□□□ -1.9
SNORD42B-201ENST00000458893 PAK3O75914 559 aaPredicted RBP3.18□□□□□ -1.9
SNORD42B-201ENST00000458893 C7P10643 843 aa3.17□□□□□ -1.9
SNORD42B-201ENST00000458893 SLC39A7Q92504 469 aa3.17□□□□□ -1.9
SNORD42B-201ENST00000458893 METRNQ9UJH8 293 aa3.17□□□□□ -1.9
SNORD42B-201ENST00000458893 LCE2DQ5TA82 110 aaPredicted RBP3.16□□□□□ -1.9
SNORD42B-201ENST00000458893 ATF5Q9Y2D1 282 aaPredicted RBP3.16□□□□□ -1.9
SNORD42B-201ENST00000458893 SPNS2Q8IVW8 549 aa3.15□□□□□ -1.91
SNORD42B-201ENST00000458893 SSUH2Q9Y2M2 353 aa3.13□□□□□ -1.91
SNORD42B-201ENST00000458893 PABPN1Q86U42 306 aaKnown RBP eCLIP3.12□□□□□ -1.91
SNORD42B-201ENST00000458893 PELP1Q8IZL8 1130 aaKnown RBP3.11□□□□□ -1.91
SNORD42B-201ENST00000458893 POTEJP0CG39 1038 aa3.1□□□□□ -1.91
SNORD42B-201ENST00000458893 ASTLQ6HA08 431 aaPredicted RBP3.09□□□□□ -1.91
SNORD42B-201ENST00000458893 PHF12Q96QT6 1004 aa3.08□□□□□ -1.92
SNORD42B-201ENST00000458893 ATMINO43313 823 aaPredicted RBP3.07□□□□□ -1.92
SNORD42B-201ENST00000458893 ST18O60284 1047 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms