Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.65■□□□□ 0.9
MRPL3P09001 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.65■□□□□ 0.9
MRPL3P09001 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MRPL3P09001 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.65■□□□□ 0.9
MRPL3P09001 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MRPL3P09001 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MRPL3P09001 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MRPL3P09001 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
MRPL3P09001 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.64■□□□□ 0.89
MRPL3P09001 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.64■□□□□ 0.89
MRPL3P09001 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MRPL3P09001 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MRPL3P09001 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MRPL3P09001 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
MRPL3P09001 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MRPL3P09001 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
MRPL3P09001 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MRPL3P09001 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
MRPL3P09001 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
MRPL3P09001 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRPL3P09001 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRPL3P09001 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRPL3P09001 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.62■□□□□ 0.89
MRPL3P09001 KRT18P10-201ENST00000388836 1287 ntBASIC20.62■□□□□ 0.89
MRPL3P09001 GPX1-201ENST00000419349 1106 ntBASIC20.62■□□□□ 0.89
MRPL3P09001 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRPL3P09001 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.62■□□□□ 0.89
MRPL3P09001 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.62■□□□□ 0.89
MRPL3P09001 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRPL3P09001 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRPL3P09001 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MRPL3P09001 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.61■□□□□ 0.89
MRPL3P09001 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.61■□□□□ 0.89
MRPL3P09001 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MRPL3P09001 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MRPL3P09001 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
MRPL3P09001 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.61■□□□□ 0.89
MRPL3P09001 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
MRPL3P09001 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MRPL3P09001 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
MRPL3P09001 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.6■□□□□ 0.89
MRPL3P09001 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MRPL3P09001 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MRPL3P09001 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MRPL3P09001 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MRPL3P09001 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MRPL3P09001 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
MRPL3P09001 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MRPL3P09001 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.59■□□□□ 0.89
MRPL3P09001 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.59■□□□□ 0.89
MRPL3P09001 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.59■□□□□ 0.89
MRPL3P09001 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MRPL3P09001 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.59■□□□□ 0.89
MRPL3P09001 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.59■□□□□ 0.89
MRPL3P09001 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
MRPL3P09001 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
MRPL3P09001 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MRPL3P09001 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MRPL3P09001 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
MRPL3P09001 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
MRPL3P09001 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MRPL3P09001 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MRPL3P09001 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
MRPL3P09001 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
MRPL3P09001 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
MRPL3P09001 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.58■□□□□ 0.89
MRPL3P09001 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
MRPL3P09001 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MRPL3P09001 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MRPL3P09001 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MRPL3P09001 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MRPL3P09001 AC009831.1-201ENST00000580420 1582 ntBASIC20.58■□□□□ 0.88
MRPL3P09001 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
MRPL3P09001 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
MRPL3P09001 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
MRPL3P09001 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MRPL3P09001 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MRPL3P09001 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
MRPL3P09001 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MRPL3P09001 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.57■□□□□ 0.88
MRPL3P09001 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MRPL3P09001 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.57■□□□□ 0.88
MRPL3P09001 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MRPL3P09001 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
MRPL3P09001 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MRPL3P09001 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MRPL3P09001 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MRPL3P09001 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
MRPL3P09001 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MRPL3P09001 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.56■□□□□ 0.88
MRPL3P09001 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MRPL3P09001 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MRPL3P09001 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MRPL3P09001 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MRPL3P09001 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
MRPL3P09001 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.56■□□□□ 0.88
MRPL3P09001 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
MRPL3P09001 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MRPL3P09001 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.55■□□□□ 0.88
MRPL3P09001 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms