Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CBX8Q9HC52 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CBX8Q9HC52 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CBX8Q9HC52 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CBX8Q9HC52 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CBX8Q9HC52 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CBX8Q9HC52 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CBX8Q9HC52 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CBX8Q9HC52 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CBX8Q9HC52 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.17■□□□□ 0.34
CBX8Q9HC52 KRT18P64-201ENST00000434946 1219 ntBASIC17.17■□□□□ 0.34
CBX8Q9HC52 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.17■□□□□ 0.34
CBX8Q9HC52 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CBX8Q9HC52 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CBX8Q9HC52 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.17■□□□□ 0.34
CBX8Q9HC52 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
CBX8Q9HC52 AC106730.1-201ENST00000566722 1090 ntBASIC17.17■□□□□ 0.34
CBX8Q9HC52 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.17■□□□□ 0.34
CBX8Q9HC52 AC025181.2-201ENST00000606994 802 ntBASIC17.17■□□□□ 0.34
CBX8Q9HC52 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CBX8Q9HC52 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC17.17■□□□□ 0.34
CBX8Q9HC52 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CBX8Q9HC52 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.17■□□□□ 0.34
CBX8Q9HC52 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC17.17■□□□□ 0.34
CBX8Q9HC52 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CBX8Q9HC52 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.17■□□□□ 0.34
CBX8Q9HC52 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CBX8Q9HC52 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC17.17■□□□□ 0.34
CBX8Q9HC52 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.17■□□□□ 0.34
CBX8Q9HC52 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC17.17■□□□□ 0.34
CBX8Q9HC52 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
CBX8Q9HC52 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CBX8Q9HC52 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
CBX8Q9HC52 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CBX8Q9HC52 AC089987.1-201ENST00000551654 2209 ntBASIC17.16■□□□□ 0.34
CBX8Q9HC52 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CBX8Q9HC52 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CBX8Q9HC52 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CBX8Q9HC52 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CBX8Q9HC52 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CBX8Q9HC52 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CBX8Q9HC52 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
CBX8Q9HC52 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CBX8Q9HC52 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CBX8Q9HC52 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CBX8Q9HC52 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.16■□□□□ 0.34
CBX8Q9HC52 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CBX8Q9HC52 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.16■□□□□ 0.34
CBX8Q9HC52 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.16■□□□□ 0.34
CBX8Q9HC52 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.16■□□□□ 0.34
CBX8Q9HC52 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.16■□□□□ 0.34
CBX8Q9HC52 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CBX8Q9HC52 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CBX8Q9HC52 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CBX8Q9HC52 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CBX8Q9HC52 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CBX8Q9HC52 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CBX8Q9HC52 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CBX8Q9HC52 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CBX8Q9HC52 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CBX8Q9HC52 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CBX8Q9HC52 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.16■□□□□ 0.34
CBX8Q9HC52 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CBX8Q9HC52 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CBX8Q9HC52 MST1P2-201ENST00000457982 2291 ntBASIC17.16■□□□□ 0.34
CBX8Q9HC52 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC17.15■□□□□ 0.34
CBX8Q9HC52 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CBX8Q9HC52 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CBX8Q9HC52 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CBX8Q9HC52 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC17.15■□□□□ 0.34
CBX8Q9HC52 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CBX8Q9HC52 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.15■□□□□ 0.34
CBX8Q9HC52 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CBX8Q9HC52 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CBX8Q9HC52 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CBX8Q9HC52 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CBX8Q9HC52 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CBX8Q9HC52 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CBX8Q9HC52 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.15■□□□□ 0.34
CBX8Q9HC52 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.15■□□□□ 0.34
CBX8Q9HC52 TIMM8BP1-201ENST00000452384 211 ntBASIC17.15■□□□□ 0.34
CBX8Q9HC52 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.15■□□□□ 0.34
CBX8Q9HC52 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.15■□□□□ 0.34
CBX8Q9HC52 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.15■□□□□ 0.34
CBX8Q9HC52 RNA5SP416-201ENST00000516838 111 ntBASIC17.15■□□□□ 0.34
CBX8Q9HC52 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.15■□□□□ 0.34
CBX8Q9HC52 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.15■□□□□ 0.34
CBX8Q9HC52 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.15■□□□□ 0.34
CBX8Q9HC52 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.15■□□□□ 0.34
CBX8Q9HC52 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.15■□□□□ 0.34
CBX8Q9HC52 AL645728.2-202ENST00000641679 227 ntBASIC17.15■□□□□ 0.34
CBX8Q9HC52 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CBX8Q9HC52 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CBX8Q9HC52 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.15■□□□□ 0.34
CBX8Q9HC52 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CBX8Q9HC52 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CBX8Q9HC52 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CBX8Q9HC52 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CBX8Q9HC52 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CBX8Q9HC52 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms