RNA–Protein interactions for RNA: ENST00000563328.4

AC004943.2-201, humanhuman

TSL 3 BASIC

Gene AC004943.2, Length 4,842 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004943.2-201ENST00000563328 NISCHQ9Y2I1 1504 aa26.83■■□□□ 1.89
AC004943.2-201ENST00000563328 PELP1Q8IZL8 1130 aaKnown RBP26.37■■□□□ 1.81
AC004943.2-201ENST00000563328 MYT1Q01538 1121 aa26.31■■□□□ 1.8
AC004943.2-201ENST00000563328 DCAF8L2P0C7V8 631 aa26.26■■□□□ 1.79
AC004943.2-201ENST00000563328 SHROOM4Q9ULL8 1493 aa24.99■■□□□ 1.59
AC004943.2-201ENST00000563328 SUPT5HO00267 1087 aaKnown RBP24.98■■□□□ 1.59
AC004943.2-201ENST00000563328 TTBK1Q5TCY1 1321 aaPredicted RBP24.4■■□□□ 1.5
AC004943.2-201ENST00000563328 CENPBP07199 599 aaPredicted RBP24.14■■□□□ 1.46
AC004943.2-201ENST00000563328 ERICH6Q7L0X2 663 aa24.01■■□□□ 1.43
AC004943.2-201ENST00000563328 EHMT2Q96KQ7 1210 aa23.87■■□□□ 1.41
AC004943.2-201ENST00000563328 PCGF6Q9BYE7 350 aa23.81■■□□□ 1.4
AC004943.2-201ENST00000563328 HRCP23327 699 aa23.76■■□□□ 1.39
AC004943.2-201ENST00000563328 ZEB1P37275 1124 aaPredicted RBP23.52■■□□□ 1.36
AC004943.2-201ENST00000563328 CCER1Q8TC90 406 aaPredicted RBP23.5■■□□□ 1.35
AC004943.2-201ENST00000563328 FAM9AQ8IZU1 332 aaPredicted RBP23.46■■□□□ 1.35
AC004943.2-201ENST00000563328 PPARGC1BQ86YN6 1023 aaKnown RBP23.11■■□□□ 1.29
AC004943.2-201ENST00000563328 TRIM41Q8WV44 630 aa23.09■■□□□ 1.29
AC004943.2-201ENST00000563328 YTHDC1Q96MU7 727 aaKnown RBP23.05■■□□□ 1.28
AC004943.2-201ENST00000563328 GTF3C3Q9Y5Q9 886 aa22.94■■□□□ 1.26
AC004943.2-201ENST00000563328 ABCC9O60706 1549 aa22.93■■□□□ 1.26
AC004943.2-201ENST00000563328 RANGAP1P46060 587 aaPredicted RBP22.85■■□□□ 1.25
AC004943.2-201ENST00000563328 BCL11AQ9H165 835 aa22.81■■□□□ 1.24
AC004943.2-201ENST00000563328 NEFLP07196 543 aa22.79■■□□□ 1.24
AC004943.2-201ENST00000563328 APLP2Q06481 763 aa22.78■■□□□ 1.24
AC004943.2-201ENST00000563328 CHIC1Q5VXU3 224 aa22.66■■□□□ 1.22
AC004943.2-201ENST00000563328 ACIN1Q9UKV3 1341 aaKnown RBP22.66■■□□□ 1.22
AC004943.2-201ENST00000563328 SCAF1Q9H7N4 1312 aaKnown RBP22.65■■□□□ 1.22
AC004943.2-201ENST00000563328 PABPN1Q86U42 306 aaKnown RBP eCLIP22.62■■□□□ 1.21
AC004943.2-201ENST00000563328 UBTFP17480 764 aaKnown RBP22.61■■□□□ 1.21
AC004943.2-201ENST00000563328 LOC105371045A0A1W2PR82 267 aa22.55■■□□□ 1.2
AC004943.2-201ENST00000563328 RTL5Q5HYW3 569 aaPredicted RBP22.53■■□□□ 1.2
AC004943.2-201ENST00000563328 EIF5BO60841 1220 aaKnown RBP22.46■■□□□ 1.19
AC004943.2-201ENST00000563328 TRIM26Q12899 539 aaPredicted RBP22.41■■□□□ 1.18
AC004943.2-201ENST00000563328 GLIPR1L2Q4G1C9 344 aa22.41■■□□□ 1.18
AC004943.2-201ENST00000563328 CCDC180Q9P1Z9 1646 aa22.38■■□□□ 1.17
AC004943.2-201ENST00000563328 ATP1B4Q9UN42 357 aaPredicted RBP22.37■■□□□ 1.17
AC004943.2-201ENST00000563328 DIEXFQ68CQ4 756 aaKnown RBP22.28■■□□□ 1.16
AC004943.2-201ENST00000563328 ANP32EQ9BTT0 268 aa22.27■■□□□ 1.16
AC004943.2-201ENST00000563328 ZCCHC6Q5VYS8 1495 aaKnown RBP22.27■■□□□ 1.16
AC004943.2-201ENST00000563328 PRKCSHP14314 528 aaPredicted RBP22.24■■□□□ 1.15
AC004943.2-201ENST00000563328 MYT1LQ9UL68 1186 aa22.2■■□□□ 1.14
AC004943.2-201ENST00000563328 NEUROD1Q13562 356 aa22.09■■□□□ 1.13
AC004943.2-201ENST00000563328 SLC24A1O60721 1099 aa22.08■■□□□ 1.12
AC004943.2-201ENST00000563328 SCRIBQ14160 1630 aa22■■□□□ 1.11
AC004943.2-201ENST00000563328 DAXXQ9UER7 740 aaPredicted RBP21.99■■□□□ 1.11
AC004943.2-201ENST00000563328 BCANQ96GW7 911 aa21.9■■□□□ 1.1
AC004943.2-201ENST00000563328 ITGAEP38570 1179 aa21.8■■□□□ 1.08
AC004943.2-201ENST00000563328 CLSPNQ9HAW4 1339 aa21.78■■□□□ 1.08
AC004943.2-201ENST00000563328 CDK11AQ9UQ88 783 aaPredicted RBP21.76■■□□□ 1.07
AC004943.2-201ENST00000563328 HNRNPUL2Q1KMD3 747 aaKnown RBP21.73■■□□□ 1.07
AC004943.2-201ENST00000563328 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.65■■□□□ 1.06
AC004943.2-201ENST00000563328 ZNF316A6NFI3 1004 aaPredicted RBP21.65■■□□□ 1.06
AC004943.2-201ENST00000563328 CSRNP3Q8WYN3 585 aa21.59■■□□□ 1.05
AC004943.2-201ENST00000563328 NBR1Q14596 966 aa21.5■■□□□ 1.03
AC004943.2-201ENST00000563328 RSF1Q96T23 1441 aaPredicted RBP21.44■■□□□ 1.02
AC004943.2-201ENST00000563328 ANP32AP39687 249 aaKnown RBP21.42■■□□□ 1.02
AC004943.2-201ENST00000563328 RTN4Q9NQC3 1192 aaKnown RBP21.42■■□□□ 1.02
AC004943.2-201ENST00000563328 RB1CC1Q8TDY2 1594 aa21.41■■□□□ 1.02
AC004943.2-201ENST00000563328 NACADO15069 1562 aa21.33■■□□□ 1.01
AC004943.2-201ENST00000563328 P3H3Q8IVL6 736 aa21.32■■□□□ 1
AC004943.2-201ENST00000563328 FBLN2P98095 1184 aa21.3■■□□□ 1
AC004943.2-201ENST00000563328 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.3■■□□□ 1
AC004943.2-201ENST00000563328 FAM50AQ14320 339 aaKnown RBP21.29■■□□□ 1
AC004943.2-201ENST00000563328 DEKP35659 375 aaKnown RBP21.29■■□□□ 1
AC004943.2-201ENST00000563328 FKBP8Q14318 412 aa21.29■■□□□ 1
AC004943.2-201ENST00000563328 PODXL2Q9NZ53 605 aa21.28■■□□□ 1
AC004943.2-201ENST00000563328 CCDC136Q96JN2 1154 aa21.24■□□□□ 0.99
AC004943.2-201ENST00000563328 DCAF1Q9Y4B6 1507 aa21.24■□□□□ 0.99
AC004943.2-201ENST00000563328 CECR2Q9BXF3 1484 aa21.23■□□□□ 0.99
AC004943.2-201ENST00000563328 ERICH6BQ5W0A0 696 aa21.21■□□□□ 0.99
AC004943.2-201ENST00000563328 MYO15BQ96JP2 1530 aa21.17■□□□□ 0.98
AC004943.2-201ENST00000563328 PKNOX2Q96KN3 472 aa21.17■□□□□ 0.98
AC004943.2-201ENST00000563328 ARID3CA6NKF2 412 aa21.16■□□□□ 0.98
AC004943.2-201ENST00000563328 ZBTB47Q9UFB7 747 aaPredicted RBP21.13■□□□□ 0.97
AC004943.2-201ENST00000563328 POLR3GLQ9BT43 218 aa21.07■□□□□ 0.96
AC004943.2-201ENST00000563328 ANO8Q9HCE9 1232 aaPredicted RBP21.06■□□□□ 0.96
AC004943.2-201ENST00000563328 TNNT2P45379 298 aaPredicted RBP21.03■□□□□ 0.96
AC004943.2-201ENST00000563328 CNGB1Q14028 1251 aaPredicted RBP21.02■□□□□ 0.95
AC004943.2-201ENST00000563328 NPM2Q86SE8 214 aaKnown RBP21■□□□□ 0.95
AC004943.2-201ENST00000563328 TRIM52Q96A61 297 aa20.99■□□□□ 0.95
AC004943.2-201ENST00000563328 NEFMP07197 916 aa20.99■□□□□ 0.95
AC004943.2-201ENST00000563328 VSIG10Q8N0Z9 540 aa20.97■□□□□ 0.95
AC004943.2-201ENST00000563328 BAZ1BQ9UIG0 1483 aaKnown RBP20.93■□□□□ 0.94
AC004943.2-201ENST00000563328 SUPT16HQ9Y5B9 1047 aaKnown RBP20.92■□□□□ 0.94
AC004943.2-201ENST00000563328 NAP1L5Q96NT1 182 aaPredicted RBP20.92■□□□□ 0.94
AC004943.2-201ENST00000563328 BAZ1AQ9NRL2 1556 aaPredicted RBP20.91■□□□□ 0.94
AC004943.2-201ENST00000563328 TSHZ2Q9NRE2 1034 aa20.9■□□□□ 0.94
AC004943.2-201ENST00000563328 CDK11BP21127 795 aaKnown RBP20.9■□□□□ 0.94
AC004943.2-201ENST00000563328 MROH2BQ7Z745 1585 aa20.9■□□□□ 0.94
AC004943.2-201ENST00000563328 NCLP19338 710 aaKnown RBP20.87■□□□□ 0.93
AC004943.2-201ENST00000563328 A0A0U1RQG5 324 aaPredicted RBP20.87■□□□□ 0.93
AC004943.2-201ENST00000563328 RBM19Q9Y4C8 960 aaKnown RBP20.86■□□□□ 0.93
AC004943.2-201ENST00000563328 WRNQ14191 1432 aaPredicted RBP eCLIP20.84■□□□□ 0.93
AC004943.2-201ENST00000563328 MIER1Q8N108 512 aa20.84■□□□□ 0.93
AC004943.2-201ENST00000563328 ANP32BQ92688 251 aaKnown RBP20.78■□□□□ 0.92
AC004943.2-201ENST00000563328 NOP58Q9Y2X3 529 aaKnown RBP20.78■□□□□ 0.92
AC004943.2-201ENST00000563328 ZNF777Q9ULD5 760 aaPredicted RBP20.76■□□□□ 0.91
AC004943.2-201ENST00000563328 ANP32CO43423 234 aa20.74■□□□□ 0.91
AC004943.2-201ENST00000563328 UBE2Q2Q8WVN8 375 aa20.73■□□□□ 0.91
AC004943.2-201ENST00000563328 CLIP1P30622 1438 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms