RNA–Protein interactions for RNA: ENST00000588734.5

TK1-203, Transcript of thymidine kinase 1, humanhuman

TSL 2 BASIC

Gene TK1, Length 1,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TK1-203ENST00000588734 NISCHQ9Y2I1 1504 aa36.7■■■■□ 3.47
TK1-203ENST00000588734 CCDC180Q9P1Z9 1646 aa32.32■■■□□ 2.76
TK1-203ENST00000588734 ABCC9O60706 1549 aa31.44■■■□□ 2.62
TK1-203ENST00000588734 ZCCHC6Q5VYS8 1495 aaKnown RBP30.69■■■□□ 2.5
TK1-203ENST00000588734 DCAF8L2P0C7V8 631 aa30.47■■■□□ 2.47
TK1-203ENST00000588734 DCAF1Q9Y4B6 1507 aa30.41■■■□□ 2.46
TK1-203ENST00000588734 MYO15BQ96JP2 1530 aa30.31■■■□□ 2.44
TK1-203ENST00000588734 NACADO15069 1562 aa30.26■■■□□ 2.43
TK1-203ENST00000588734 RB1CC1Q8TDY2 1594 aa30.22■■■□□ 2.43
TK1-203ENST00000588734 UNC13AQ9UPW8 1703 aa29.6■■■□□ 2.33
TK1-203ENST00000588734 SCRIBQ14160 1630 aa29.53■■■□□ 2.32
TK1-203ENST00000588734 PABPN1Q86U42 306 aaKnown RBP eCLIP29.4■■■□□ 2.3
TK1-203ENST00000588734 SHROOM4Q9ULL8 1493 aa29.39■■■□□ 2.29
TK1-203ENST00000588734 BICRAQ9NZM4 1560 aa29.36■■■□□ 2.29
TK1-203ENST00000588734 DNAJC5BQ9UF47 199 aa28.8■■■□□ 2.2
TK1-203ENST00000588734 EIF4G1Q04637 1599 aaKnown RBP28.56■■■□□ 2.16
TK1-203ENST00000588734 CECR2Q9BXF3 1484 aa28.5■■■□□ 2.15
TK1-203ENST00000588734 CC2D2AQ9P2K1 1620 aa28.43■■■□□ 2.14
TK1-203ENST00000588734 BAZ1AQ9NRL2 1556 aaPredicted RBP28.41■■■□□ 2.14
TK1-203ENST00000588734 SMARCA4P51532 1647 aa28.32■■■□□ 2.12
TK1-203ENST00000588734 MROH2BQ7Z745 1585 aa28.28■■■□□ 2.12
TK1-203ENST00000588734 RSF1Q96T23 1441 aaPredicted RBP28.22■■■□□ 2.11
TK1-203ENST00000588734 PEG3Q9GZU2 1588 aa28.05■■■□□ 2.08
TK1-203ENST00000588734 SMARCA2P51531 1590 aa28.03■■■□□ 2.08
TK1-203ENST00000588734 SUPT5HO00267 1087 aaKnown RBP28.03■■■□□ 2.08
TK1-203ENST00000588734 ATAD2BQ9ULI0 1458 aa28.02■■■□□ 2.08
TK1-203ENST00000588734 WIZO95785 1651 aa28■■■□□ 2.07
TK1-203ENST00000588734 NCAPD3P42695 1498 aa27.93■■■□□ 2.06
TK1-203ENST00000588734 BAZ1BQ9UIG0 1483 aaKnown RBP27.83■■■□□ 2.05
TK1-203ENST00000588734 HMGXB3Q12766 1538 aa27.82■■■□□ 2.04
TK1-203ENST00000588734 TOP2AP11388 1531 aaKnown RBP27.75■■■□□ 2.03
TK1-203ENST00000588734 CCDC88BA6NC98 1476 aa27.44■■□□□ 1.98
TK1-203ENST00000588734 NESP48681 1621 aa27.26■■□□□ 1.95
TK1-203ENST00000588734 CADPSQ9ULU8 1353 aa27.16■■□□□ 1.94
TK1-203ENST00000588734 LAMC3Q9Y6N6 1575 aa27.13■■□□□ 1.93
TK1-203ENST00000588734 CFTRP13569 1480 aa27.12■■□□□ 1.93
TK1-203ENST00000588734 ERCC6Q03468 1493 aa27.06■■□□□ 1.92
TK1-203ENST00000588734 PRDM2Q13029 1718 aa26.92■■□□□ 1.9
TK1-203ENST00000588734 KIF21AQ7Z4S6 1674 aa26.92■■□□□ 1.9
TK1-203ENST00000588734 PDS5BQ9NTI5 1447 aa26.91■■□□□ 1.9
TK1-203ENST00000588734 FANCD2Q9BXW9 1451 aa26.82■■□□□ 1.88
TK1-203ENST00000588734 THOC2Q8NI27 1593 aaKnown RBP26.8■■□□□ 1.88
TK1-203ENST00000588734 CEP164Q9UPV0 1460 aa26.73■■□□□ 1.87
TK1-203ENST00000588734 CUX2O14529 1486 aa26.7■■□□□ 1.86
TK1-203ENST00000588734 MRC2Q9UBG0 1479 aa26.67■■□□□ 1.86
TK1-203ENST00000588734 ABCC8Q09428 1581 aa26.61■■□□□ 1.85
TK1-203ENST00000588734 WRNQ14191 1432 aaPredicted RBP eCLIP26.6■■□□□ 1.854e-6■□□□□ 10.4
TK1-203ENST00000588734 WDR62O43379 1518 aa26.59■■□□□ 1.85
TK1-203ENST00000588734 CHIC1Q5VXU3 224 aa26.54■■□□□ 1.84
TK1-203ENST00000588734 URB2Q14146 1524 aaKnown RBP26.53■■□□□ 1.84
TK1-203ENST00000588734 CUX1P39880 1505 aa26.49■■□□□ 1.83
TK1-203ENST00000588734 DNMBPQ6XZF7 1577 aa26.48■■□□□ 1.83
TK1-203ENST00000588734 TRIM41Q8WV44 630 aa26.47■■□□□ 1.83
TK1-203ENST00000588734 TOPBP1Q92547 1522 aa26.46■■□□□ 1.83
TK1-203ENST00000588734 SYNJ1O43426 1573 aa26.45■■□□□ 1.82
TK1-203ENST00000588734 TOP2BQ02880 1626 aa26.45■■□□□ 1.82
TK1-203ENST00000588734 BIVM-ERCC5R4GMW8 1640 aa26.42■■□□□ 1.82
TK1-203ENST00000588734 FGD5Q6ZNL6 1462 aa26.31■■□□□ 1.8
TK1-203ENST00000588734 POLA1P09884 1462 aaPredicted RBP26.28■■□□□ 1.8
TK1-203ENST00000588734 SOGA1O94964 1423 aa26.22■■□□□ 1.79
TK1-203ENST00000588734 IFT140Q96RY7 1462 aa26.15■■□□□ 1.78
TK1-203ENST00000588734 RAD54L2Q9Y4B4 1467 aa26.15■■□□□ 1.78
TK1-203ENST00000588734 TARBP1Q13395 1621 aaKnown RBP26.11■■□□□ 1.77
TK1-203ENST00000588734 ABCA10Q8WWZ4 1543 aa26.1■■□□□ 1.77
TK1-203ENST00000588734 ZNF608Q9ULD9 1512 aaPredicted RBP26.09■■□□□ 1.77
TK1-203ENST00000588734 WDR97A6NE52 1622 aa26.02■■□□□ 1.76
TK1-203ENST00000588734 KIF27Q86VH2 1401 aa26.01■■□□□ 1.75
TK1-203ENST00000588734 EIF4G3O43432 1585 aaKnown RBP25.99■■□□□ 1.75
TK1-203ENST00000588734 TDRD9Q8NDG6 1382 aaKnown RBP25.98■■□□□ 1.75
TK1-203ENST00000588734 EEA1Q15075 1411 aa25.95■■□□□ 1.74
TK1-203ENST00000588734 AQRO60306 1485 aaKnown RBP eCLIP25.94■■□□□ 1.743e-7■■■■□ 22.8
TK1-203ENST00000588734 RUSC2Q8N2Y8 1516 aa25.93■■□□□ 1.74
TK1-203ENST00000588734 GAPVD1Q14C86 1478 aa25.91■■□□□ 1.74
TK1-203ENST00000588734 ABCA5Q8WWZ7 1642 aa25.9■■□□□ 1.74
TK1-203ENST00000588734 FAM9AQ8IZU1 332 aaPredicted RBP25.87■■□□□ 1.73
TK1-203ENST00000588734 CSRNP3Q8WYN3 585 aa25.84■■□□□ 1.73
TK1-203ENST00000588734 IGF1RP08069 1367 aa25.82■■□□□ 1.72
TK1-203ENST00000588734 GRIN2BQ13224 1484 aa25.82■■□□□ 1.72
TK1-203ENST00000588734 ERICH3Q5RHP9 1530 aa25.8■■□□□ 1.72
TK1-203ENST00000588734 DNAJC5Q9H3Z4 198 aa25.79■■□□□ 1.72
TK1-203ENST00000588734 PBRM1Q86U86 1689 aa25.77■■□□□ 1.72
TK1-203ENST00000588734 SNAPC4Q5SXM2 1469 aa25.7■■□□□ 1.7
TK1-203ENST00000588734 CARMIL1Q5VZK9 1371 aa25.69■■□□□ 1.7
TK1-203ENST00000588734 MAGI1Q96QZ7 1491 aaPredicted RBP25.68■■□□□ 1.7
TK1-203ENST00000588734 CUL7Q14999 1698 aa25.68■■□□□ 1.7
TK1-203ENST00000588734 PRXQ9BXM0 1461 aa25.65■■□□□ 1.7
TK1-203ENST00000588734 FHAD1B1AJZ9 1412 aa25.64■■□□□ 1.7
TK1-203ENST00000588734 CHD1O14646 1710 aa25.64■■□□□ 1.69
TK1-203ENST00000588734 OSCARQ8IYS5 282 aa25.61■■□□□ 1.69
TK1-203ENST00000588734 ADAMTS12P58397 1594 aa25.6■■□□□ 1.69
TK1-203ENST00000588734 FBLN2P98095 1184 aa25.59■■□□□ 1.69
TK1-203ENST00000588734 RAPGEF2Q9Y4G8 1499 aa25.59■■□□□ 1.69
TK1-203ENST00000588734 KIF21BO75037 1637 aa25.58■■□□□ 1.69
TK1-203ENST00000588734 SYNJ2O15056 1496 aa25.58■■□□□ 1.68
TK1-203ENST00000588734 CHMP7Q8WUX9 453 aaPredicted RBP25.56■■□□□ 1.68
TK1-203ENST00000588734 GOLGA3Q08378 1498 aa25.5■■□□□ 1.67
TK1-203ENST00000588734 GRIN2AQ12879 1464 aa25.48■■□□□ 1.67
TK1-203ENST00000588734 EHMT2Q96KQ7 1210 aa25.47■■□□□ 1.67
TK1-203ENST00000588734 LOC105371045A0A1W2PR82 267 aa25.45■■□□□ 1.67
TK1-203ENST00000588734 UBTFP17480 764 aaKnown RBP25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms