Protein–RNA interactions for Protein: Q9C030

TRIM6, Tripartite motif-containing protein 6, humanhuman

Predicted RBP Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6Q9C030 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM6Q9C030 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM6Q9C030 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM6Q9C030 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM6Q9C030 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.95■□□□□ 0.3
TRIM6Q9C030 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM6Q9C030 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM6Q9C030 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM6Q9C030 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM6Q9C030 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TRIM6Q9C030 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM6Q9C030 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM6Q9C030 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM6Q9C030 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.95■□□□□ 0.3
TRIM6Q9C030 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM6Q9C030 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TRIM6Q9C030 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM6Q9C030 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
TRIM6Q9C030 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM6Q9C030 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM6Q9C030 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM6Q9C030 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.95■□□□□ 0.3
TRIM6Q9C030 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.95■□□□□ 0.3
TRIM6Q9C030 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
TRIM6Q9C030 AC068587.3-201ENST00000526613 355 ntBASIC16.95■□□□□ 0.3
TRIM6Q9C030 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.95■□□□□ 0.3
TRIM6Q9C030 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM6Q9C030 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM6Q9C030 AP001063.1-201ENST00000568332 529 ntBASIC16.95■□□□□ 0.3
TRIM6Q9C030 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM6Q9C030 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.95■□□□□ 0.3
TRIM6Q9C030 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TRIM6Q9C030 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM6Q9C030 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM6Q9C030 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM6Q9C030 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM6Q9C030 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM6Q9C030 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TRIM6Q9C030 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TRIM6Q9C030 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.95■□□□□ 0.3
TRIM6Q9C030 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
TRIM6Q9C030 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM6Q9C030 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.95■□□□□ 0.3
TRIM6Q9C030 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM6Q9C030 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TRIM6Q9C030 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
TRIM6Q9C030 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM6Q9C030 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM6Q9C030 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM6Q9C030 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.95■□□□□ 0.3
TRIM6Q9C030 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM6Q9C030 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM6Q9C030 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM6Q9C030 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM6Q9C030 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM6Q9C030 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM6Q9C030 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM6Q9C030 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM6Q9C030 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM6Q9C030 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM6Q9C030 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM6Q9C030 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM6Q9C030 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM6Q9C030 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM6Q9C030 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM6Q9C030 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM6Q9C030 MIR600HG-201ENST00000449175 5984 ntBASIC16.94■□□□□ 0.3
TRIM6Q9C030 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRIM6Q9C030 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM6Q9C030 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM6Q9C030 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM6Q9C030 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM6Q9C030 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM6Q9C030 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM6Q9C030 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM6Q9C030 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TRIM6Q9C030 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM6Q9C030 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM6Q9C030 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM6Q9C030 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM6Q9C030 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM6Q9C030 MIR1909-201ENST00000411312 80 ntBASIC16.94■□□□□ 0.3
TRIM6Q9C030 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRIM6Q9C030 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM6Q9C030 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TRIM6Q9C030 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.94■□□□□ 0.3
TRIM6Q9C030 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM6Q9C030 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM6Q9C030 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM6Q9C030 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM6Q9C030 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM6Q9C030 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TRIM6Q9C030 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM6Q9C030 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM6Q9C030 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM6Q9C030 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM6Q9C030 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM6Q9C030 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM6Q9C030 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM6Q9C030 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms