RNA–Protein interactions for RNA: ENST00000379153.3

CD83-201, Transcript of CD83 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD83, Length 2,471 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD83-201ENST00000379153 NISCHQ9Y2I1 1504 aa34.93■■■■□ 3.18
CD83-201ENST00000379153 CCDC180Q9P1Z9 1646 aa29.96■■■□□ 2.39
CD83-201ENST00000379153 ZCCHC6Q5VYS8 1495 aaKnown RBP29.41■■■□□ 2.3
CD83-201ENST00000379153 SHROOM4Q9ULL8 1493 aa29.32■■■□□ 2.28
CD83-201ENST00000379153 DCAF8L2P0C7V8 631 aa29.17■■■□□ 2.26
CD83-201ENST00000379153 DCAF1Q9Y4B6 1507 aa28.65■■■□□ 2.18
CD83-201ENST00000379153 SUPT5HO00267 1087 aaKnown RBP28.46■■■□□ 2.15
CD83-201ENST00000379153 ABCC9O60706 1549 aa28.34■■■□□ 2.13
CD83-201ENST00000379153 MYO15BQ96JP2 1530 aa28.06■■■□□ 2.08
CD83-201ENST00000379153 SCRIBQ14160 1630 aa27.99■■■□□ 2.07
CD83-201ENST00000379153 NACADO15069 1562 aa27.87■■■□□ 2.05
CD83-201ENST00000379153 RB1CC1Q8TDY2 1594 aa27.55■■■□□ 2
CD83-201ENST00000379153 RSF1Q96T23 1441 aaPredicted RBP27.41■■□□□ 1.98
CD83-201ENST00000379153 CHIC1Q5VXU3 224 aa27.36■■□□□ 1.97
CD83-201ENST00000379153 CECR2Q9BXF3 1484 aa27.3■■□□□ 1.96
CD83-201ENST00000379153 MROH2BQ7Z745 1585 aa27.13■■□□□ 1.93
CD83-201ENST00000379153 UNC13AQ9UPW8 1703 aa27.08■■□□□ 1.93
CD83-201ENST00000379153 PABPN1Q86U42 306 aaKnown RBP eCLIP26.99■■□□□ 1.91
CD83-201ENST00000379153 WIZO95785 1651 aa26.93■■□□□ 1.9
CD83-201ENST00000379153 BAZ1AQ9NRL2 1556 aaPredicted RBP26.86■■□□□ 1.89
CD83-201ENST00000379153 BICRAQ9NZM4 1560 aa26.83■■□□□ 1.89
CD83-201ENST00000379153 SMARCA4P51532 1647 aa26.72■■□□□ 1.87
CD83-201ENST00000379153 TRIM41Q8WV44 630 aa26.56■■□□□ 1.84
CD83-201ENST00000379153 LOC105371045A0A1W2PR82 267 aa26.53■■□□□ 1.84
CD83-201ENST00000379153 TOP2AP11388 1531 aaKnown RBP26.5■■□□□ 1.83
CD83-201ENST00000379153 CCDC88BA6NC98 1476 aa26.39■■□□□ 1.82
CD83-201ENST00000379153 SMARCA2P51531 1590 aa26.34■■□□□ 1.81
CD83-201ENST00000379153 FAM9AQ8IZU1 332 aaPredicted RBP26.32■■□□□ 1.8
CD83-201ENST00000379153 EIF4G1Q04637 1599 aaKnown RBP26.27■■□□□ 1.8
CD83-201ENST00000379153 PEG3Q9GZU2 1588 aa26.24■■□□□ 1.79
CD83-201ENST00000379153 ATAD2BQ9ULI0 1458 aa26.21■■□□□ 1.79
CD83-201ENST00000379153 EHMT2Q96KQ7 1210 aa26.12■■□□□ 1.77
CD83-201ENST00000379153 ABCC8Q09428 1581 aa26.11■■□□□ 1.77
CD83-201ENST00000379153 BAZ1BQ9UIG0 1483 aaKnown RBP26.1■■□□□ 1.77
CD83-201ENST00000379153 PCGF6Q9BYE7 350 aa25.85■■□□□ 1.73
CD83-201ENST00000379153 NCAPD3P42695 1498 aa25.81■■□□□ 1.72
CD83-201ENST00000379153 SOGA1O94964 1423 aa25.76■■□□□ 1.71
CD83-201ENST00000379153 WRNQ14191 1432 aaPredicted RBP eCLIP25.76■■□□□ 1.71
CD83-201ENST00000379153 HMGXB3Q12766 1538 aa25.73■■□□□ 1.71
CD83-201ENST00000379153 RUSC2Q8N2Y8 1516 aa25.66■■□□□ 1.7
CD83-201ENST00000379153 SYNJ1O43426 1573 aa25.64■■□□□ 1.69
CD83-201ENST00000379153 CSRNP3Q8WYN3 585 aa25.55■■□□□ 1.68
CD83-201ENST00000379153 CC2D2AQ9P2K1 1620 aa25.5■■□□□ 1.67
CD83-201ENST00000379153 TRIM26Q12899 539 aaPredicted RBP25.49■■□□□ 1.67
CD83-201ENST00000379153 EEA1Q15075 1411 aa25.48■■□□□ 1.67
CD83-201ENST00000379153 CFTRP13569 1480 aa25.43■■□□□ 1.66
CD83-201ENST00000379153 UBTFP17480 764 aaKnown RBP25.4■■□□□ 1.66
CD83-201ENST00000379153 PPARGC1BQ86YN6 1023 aaKnown RBP25.38■■□□□ 1.65
CD83-201ENST00000379153 TOP2BQ02880 1626 aa25.37■■□□□ 1.65
CD83-201ENST00000379153 HRCP23327 699 aa25.37■■□□□ 1.65
CD83-201ENST00000379153 TNIKQ9UKE5 1360 aa25.32■■□□□ 1.64
CD83-201ENST00000379153 CEP162Q5TB80 1403 aa25.31■■□□□ 1.64
CD83-201ENST00000379153 CUX1P39880 1505 aa25.29■■□□□ 1.64
CD83-201ENST00000379153 GOLGA3Q08378 1498 aa25.29■■□□□ 1.64
CD83-201ENST00000379153 CADPSQ9ULU8 1353 aa25.28■■□□□ 1.64
CD83-201ENST00000379153 BIVM-ERCC5R4GMW8 1640 aa25.27■■□□□ 1.64
CD83-201ENST00000379153 CEP164Q9UPV0 1460 aa25.21■■□□□ 1.63
CD83-201ENST00000379153 RAPGEF2Q9Y4G8 1499 aa25.15■■□□□ 1.62
CD83-201ENST00000379153 KIF21BO75037 1637 aa25.15■■□□□ 1.62
CD83-201ENST00000379153 PRDM2Q13029 1718 aa25.1■■□□□ 1.61
CD83-201ENST00000379153 DNAJC5BQ9UF47 199 aa25.1■■□□□ 1.61
CD83-201ENST00000379153 TTBK1Q5TCY1 1321 aaPredicted RBP25.1■■□□□ 1.61
CD83-201ENST00000379153 RANGAP1P46060 587 aaPredicted RBP25.08■■□□□ 1.61
CD83-201ENST00000379153 NESP48681 1621 aa25.06■■□□□ 1.6
CD83-201ENST00000379153 FANCD2Q9BXW9 1451 aa25.03■■□□□ 1.6
CD83-201ENST00000379153 KIF27Q86VH2 1401 aa25.02■■□□□ 1.6
CD83-201ENST00000379153 CLIP1P30622 1438 aa24.99■■□□□ 1.59
CD83-201ENST00000379153 PRXQ9BXM0 1461 aa24.97■■□□□ 1.59
CD83-201ENST00000379153 FGD5Q6ZNL6 1462 aa24.95■■□□□ 1.58
CD83-201ENST00000379153 CUX2O14529 1486 aa24.92■■□□□ 1.58
CD83-201ENST00000379153 ERICH3Q5RHP9 1530 aa24.87■■□□□ 1.57
CD83-201ENST00000379153 IGF1RP08069 1367 aa24.83■■□□□ 1.56
CD83-201ENST00000379153 RAD54L2Q9Y4B4 1467 aa24.79■■□□□ 1.56
CD83-201ENST00000379153 TOPBP1Q92547 1522 aa24.79■■□□□ 1.56
CD83-201ENST00000379153 VPS8Q8N3P4 1428 aa24.78■■□□□ 1.56
CD83-201ENST00000379153 LAMC3Q9Y6N6 1575 aa24.78■■□□□ 1.56
CD83-201ENST00000379153 DNMBPQ6XZF7 1577 aa24.78■■□□□ 1.56
CD83-201ENST00000379153 POLA1P09884 1462 aaPredicted RBP24.74■■□□□ 1.55
CD83-201ENST00000379153 CARMIL1Q5VZK9 1371 aa24.71■■□□□ 1.55
CD83-201ENST00000379153 URB2Q14146 1524 aaKnown RBP24.7■■□□□ 1.54
CD83-201ENST00000379153 PDS5BQ9NTI5 1447 aa24.68■■□□□ 1.54
CD83-201ENST00000379153 ARAP1Q96P48 1450 aa24.66■■□□□ 1.54
CD83-201ENST00000379153 APLP2Q06481 763 aa24.66■■□□□ 1.54
CD83-201ENST00000379153 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.64■■□□□ 1.54
CD83-201ENST00000379153 ABCA10Q8WWZ4 1543 aa24.63■■□□□ 1.53
CD83-201ENST00000379153 ZEB1P37275 1124 aaPredicted RBP24.6■■□□□ 1.53
CD83-201ENST00000379153 KIF21AQ7Z4S6 1674 aa24.57■■□□□ 1.52
CD83-201ENST00000379153 ARHGAP35Q9NRY4 1499 aa24.56■■□□□ 1.52
CD83-201ENST00000379153 TDRD9Q8NDG6 1382 aaKnown RBP24.54■■□□□ 1.52
CD83-201ENST00000379153 CCER1Q8TC90 406 aaPredicted RBP24.51■■□□□ 1.51
CD83-201ENST00000379153 KANK4Q5T7N3 995 aaPredicted RBP24.47■■□□□ 1.51
CD83-201ENST00000379153 HNRNPUL2Q1KMD3 747 aaKnown RBP24.44■■□□□ 1.5
CD83-201ENST00000379153 P3H3Q8IVL6 736 aa24.43■■□□□ 1.5
CD83-201ENST00000379153 WDR97A6NE52 1622 aa24.42■■□□□ 1.5
CD83-201ENST00000379153 GAPVD1Q14C86 1478 aa24.39■■□□□ 1.49
CD83-201ENST00000379153 ABCA5Q8WWZ7 1642 aa24.36■■□□□ 1.49
CD83-201ENST00000379153 CUL7Q14999 1698 aa24.35■■□□□ 1.49
CD83-201ENST00000379153 MRC2Q9UBG0 1479 aa24.33■■□□□ 1.48
CD83-201ENST00000379153 TARBP1Q13395 1621 aaKnown RBP24.32■■□□□ 1.48
CD83-201ENST00000379153 AQRO60306 1485 aaKnown RBP eCLIP24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 631.6 ms