RNA–Protein interactions for RNA: ENST00000356064.3

ARFIP1-202, Transcript of ADP ribosylation factor interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene ARFIP1, Length 1,302 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFIP1-202ENST00000356064 NISCHQ9Y2I1 1504 aa37.4■■■■□ 3.58
ARFIP1-202ENST00000356064 CCDC180Q9P1Z9 1646 aa33.48■■■□□ 2.95
ARFIP1-202ENST00000356064 ABCC9O60706 1549 aa32.82■■■□□ 2.85
ARFIP1-202ENST00000356064 RB1CC1Q8TDY2 1594 aa31.6■■■□□ 2.65
ARFIP1-202ENST00000356064 NACADO15069 1562 aa31.49■■■□□ 2.63
ARFIP1-202ENST00000356064 DCAF8L2P0C7V8 631 aa31.28■■■□□ 2.6
ARFIP1-202ENST00000356064 MYO15BQ96JP2 1530 aa31.23■■■□□ 2.59
ARFIP1-202ENST00000356064 ZCCHC6Q5VYS8 1495 aaKnown RBP31.14■■■□□ 2.58
ARFIP1-202ENST00000356064 DCAF1Q9Y4B6 1507 aa31■■■□□ 2.55
ARFIP1-202ENST00000356064 UNC13AQ9UPW8 1703 aa30.82■■■□□ 2.52
ARFIP1-202ENST00000356064 PABPN1Q86U42 306 aaKnown RBP eCLIP30.55■■■□□ 2.48
ARFIP1-202ENST00000356064 BICRAQ9NZM4 1560 aa30.51■■■□□ 2.48
ARFIP1-202ENST00000356064 SCRIBQ14160 1630 aa30.45■■■□□ 2.46
ARFIP1-202ENST00000356064 SHROOM4Q9ULL8 1493 aa30.38■■■□□ 2.45
ARFIP1-202ENST00000356064 DNAJC5BQ9UF47 199 aa30.14■■■□□ 2.42
ARFIP1-202ENST00000356064 EIF4G1Q04637 1599 aaKnown RBP29.8■■■□□ 2.36
ARFIP1-202ENST00000356064 CC2D2AQ9P2K1 1620 aa29.72■■■□□ 2.35
ARFIP1-202ENST00000356064 CECR2Q9BXF3 1484 aa29.56■■■□□ 2.32
ARFIP1-202ENST00000356064 SMARCA4P51532 1647 aa29.11■■■□□ 2.25
ARFIP1-202ENST00000356064 BAZ1AQ9NRL2 1556 aaPredicted RBP29.09■■■□□ 2.25
ARFIP1-202ENST00000356064 SMARCA2P51531 1590 aa29.02■■■□□ 2.24
ARFIP1-202ENST00000356064 NCAPD3P42695 1498 aa28.99■■■□□ 2.23
ARFIP1-202ENST00000356064 ATAD2BQ9ULI0 1458 aa28.95■■■□□ 2.23
ARFIP1-202ENST00000356064 HMGXB3Q12766 1538 aa28.91■■■□□ 2.22
ARFIP1-202ENST00000356064 PEG3Q9GZU2 1588 aa28.84■■■□□ 2.21
ARFIP1-202ENST00000356064 BAZ1BQ9UIG0 1483 aaKnown RBP28.78■■■□□ 2.2
ARFIP1-202ENST00000356064 MROH2BQ7Z745 1585 aa28.78■■■□□ 2.2
ARFIP1-202ENST00000356064 WIZO95785 1651 aa28.48■■■□□ 2.15
ARFIP1-202ENST00000356064 ERCC6Q03468 1493 aa28.42■■■□□ 2.14
ARFIP1-202ENST00000356064 RSF1Q96T23 1441 aaPredicted RBP28.36■■■□□ 2.13
ARFIP1-202ENST00000356064 LAMC3Q9Y6N6 1575 aa28.35■■■□□ 2.13
ARFIP1-202ENST00000356064 NESP48681 1621 aa28.29■■■□□ 2.12
ARFIP1-202ENST00000356064 TOP2AP11388 1531 aaKnown RBP28.24■■■□□ 2.11
ARFIP1-202ENST00000356064 CUX2O14529 1486 aa28.2■■■□□ 2.1
ARFIP1-202ENST00000356064 PDS5BQ9NTI5 1447 aa28.15■■■□□ 2.1
ARFIP1-202ENST00000356064 CADPSQ9ULU8 1353 aa28.12■■■□□ 2.09
ARFIP1-202ENST00000356064 KIF21AQ7Z4S6 1674 aa28.05■■■□□ 2.08
ARFIP1-202ENST00000356064 THOC2Q8NI27 1593 aaKnown RBP28.02■■■□□ 2.08
ARFIP1-202ENST00000356064 CFTRP13569 1480 aa27.92■■■□□ 2.06
ARFIP1-202ENST00000356064 CEP164Q9UPV0 1460 aa27.87■■■□□ 2.05
ARFIP1-202ENST00000356064 MRC2Q9UBG0 1479 aa27.86■■■□□ 2.05
ARFIP1-202ENST00000356064 FANCD2Q9BXW9 1451 aa27.83■■■□□ 2.05
ARFIP1-202ENST00000356064 PRDM2Q13029 1718 aa27.83■■■□□ 2.05
ARFIP1-202ENST00000356064 CCDC88BA6NC98 1476 aa27.81■■■□□ 2.04
ARFIP1-202ENST00000356064 WDR62O43379 1518 aa27.77■■■□□ 2.04
ARFIP1-202ENST00000356064 URB2Q14146 1524 aaKnown RBP27.52■■■□□ 2
ARFIP1-202ENST00000356064 SUPT5HO00267 1087 aaKnown RBP27.45■■□□□ 1.99
ARFIP1-202ENST00000356064 DNAJC5Q9H3Z4 198 aa27.44■■□□□ 1.98
ARFIP1-202ENST00000356064 ABCC8Q09428 1581 aa27.43■■□□□ 1.98
ARFIP1-202ENST00000356064 TOPBP1Q92547 1522 aa27.35■■□□□ 1.97
ARFIP1-202ENST00000356064 DNMBPQ6XZF7 1577 aa27.35■■□□□ 1.97
ARFIP1-202ENST00000356064 IFT140Q96RY7 1462 aa27.28■■□□□ 1.96
ARFIP1-202ENST00000356064 POLA1P09884 1462 aaPredicted RBP27.1■■□□□ 1.93
ARFIP1-202ENST00000356064 ZNF608Q9ULD9 1512 aaPredicted RBP27.07■■□□□ 1.92
ARFIP1-202ENST00000356064 EIF4G3O43432 1585 aaKnown RBP27.07■■□□□ 1.92
ARFIP1-202ENST00000356064 TARBP1Q13395 1621 aaKnown RBP27.06■■□□□ 1.92
ARFIP1-202ENST00000356064 AEBP2Q6ZN18 517 aaPredicted RBP27.05■■□□□ 1.92
ARFIP1-202ENST00000356064 CUX1P39880 1505 aa27.03■■□□□ 1.92
ARFIP1-202ENST00000356064 FGD5Q6ZNL6 1462 aa27.01■■□□□ 1.91
ARFIP1-202ENST00000356064 WDR97A6NE52 1622 aa26.98■■□□□ 1.91
ARFIP1-202ENST00000356064 SOGA1O94964 1423 aa26.97■■□□□ 1.91
ARFIP1-202ENST00000356064 RAD54L2Q9Y4B4 1467 aa26.93■■□□□ 1.9
ARFIP1-202ENST00000356064 OSCARQ8IYS5 282 aa26.9■■□□□ 1.9
ARFIP1-202ENST00000356064 AQRO60306 1485 aaKnown RBP eCLIP26.88■■□□□ 1.89
ARFIP1-202ENST00000356064 WRNQ14191 1432 aaPredicted RBP eCLIP26.82■■□□□ 1.88
ARFIP1-202ENST00000356064 BIVM-ERCC5R4GMW8 1640 aa26.81■■□□□ 1.88
ARFIP1-202ENST00000356064 TOP2BQ02880 1626 aa26.8■■□□□ 1.88
ARFIP1-202ENST00000356064 TDRD9Q8NDG6 1382 aaKnown RBP26.8■■□□□ 1.88
ARFIP1-202ENST00000356064 CHD1O14646 1710 aa26.76■■□□□ 1.88
ARFIP1-202ENST00000356064 ABCA10Q8WWZ4 1543 aa26.75■■□□□ 1.87
ARFIP1-202ENST00000356064 GRIN2BQ13224 1484 aa26.74■■□□□ 1.87
ARFIP1-202ENST00000356064 SYNJ1O43426 1573 aa26.73■■□□□ 1.87
ARFIP1-202ENST00000356064 MAGI1Q96QZ7 1491 aaPredicted RBP26.73■■□□□ 1.87
ARFIP1-202ENST00000356064 SNAPC4Q5SXM2 1469 aa26.72■■□□□ 1.87
ARFIP1-202ENST00000356064 PBRM1Q86U86 1689 aa26.71■■□□□ 1.87
ARFIP1-202ENST00000356064 GAPVD1Q14C86 1478 aa26.69■■□□□ 1.86
ARFIP1-202ENST00000356064 ABCA5Q8WWZ7 1642 aa26.68■■□□□ 1.86
ARFIP1-202ENST00000356064 FBLN2P98095 1184 aa26.65■■□□□ 1.86
ARFIP1-202ENST00000356064 SYNJ2O15056 1496 aa26.59■■□□□ 1.85
ARFIP1-202ENST00000356064 CHMP7Q8WUX9 453 aaPredicted RBP26.57■■□□□ 1.84
ARFIP1-202ENST00000356064 RIMBP3CA6NJZ7 1639 aa26.53■■□□□ 1.84
ARFIP1-202ENST00000356064 RIMBP3BA6NNM3 1639 aa26.53■■□□□ 1.84
ARFIP1-202ENST00000356064 RIMBP3Q9UFD9 1639 aa26.53■■□□□ 1.84
ARFIP1-202ENST00000356064 ARHGEF11O15085 1522 aa26.5■■□□□ 1.83
ARFIP1-202ENST00000356064 TRIM41Q8WV44 630 aa26.48■■□□□ 1.83
ARFIP1-202ENST00000356064 ADAMTS12P58397 1594 aa26.47■■□□□ 1.83
ARFIP1-202ENST00000356064 ERICH3Q5RHP9 1530 aa26.47■■□□□ 1.83
ARFIP1-202ENST00000356064 CLASP1Q7Z460 1538 aa26.44■■□□□ 1.82
ARFIP1-202ENST00000356064 FHAD1B1AJZ9 1412 aa26.39■■□□□ 1.81
ARFIP1-202ENST00000356064 GRIN2AQ12879 1464 aa26.38■■□□□ 1.81
ARFIP1-202ENST00000356064 KIF27Q86VH2 1401 aa26.31■■□□□ 1.8
ARFIP1-202ENST00000356064 NUP160Q12769 1436 aa26.25■■□□□ 1.79
ARFIP1-202ENST00000356064 ARAP1Q96P48 1450 aa26.24■■□□□ 1.79
ARFIP1-202ENST00000356064 CUL7Q14999 1698 aa26.24■■□□□ 1.79
ARFIP1-202ENST00000356064 CEP170Q5SW79 1584 aa26.24■■□□□ 1.79
ARFIP1-202ENST00000356064 CYB5RLQ6IPT4 315 aa26.19■■□□□ 1.78
ARFIP1-202ENST00000356064 SHROOM2Q13796 1616 aa26.11■■□□□ 1.77
ARFIP1-202ENST00000356064 IGF1RP08069 1367 aa26.1■■□□□ 1.77
ARFIP1-202ENST00000356064 RUSC2Q8N2Y8 1516 aa26.08■■□□□ 1.77
ARFIP1-202ENST00000356064 CARMIL1Q5VZK9 1371 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms