RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 NISCHQ9Y2I1 1504 aa37.77■■■■□ 3.64
LINC01220-201ENST00000558575 ABCC9O60706 1549 aa35.08■■■■□ 3.21
LINC01220-201ENST00000558575 CCDC180Q9P1Z9 1646 aa34.37■■■■□ 3.09
LINC01220-201ENST00000558575 DNAJC5BQ9UF47 199 aa33.64■■■□□ 2.98
LINC01220-201ENST00000558575 RB1CC1Q8TDY2 1594 aa33.03■■■□□ 2.88
LINC01220-201ENST00000558575 NACADO15069 1562 aa32.58■■■□□ 2.81
LINC01220-201ENST00000558575 UNC13AQ9UPW8 1703 aa32.55■■■□□ 2.8
LINC01220-201ENST00000558575 PABPN1Q86U42 306 aaKnown RBP eCLIP32.44■■■□□ 2.78
LINC01220-201ENST00000558575 BICRAQ9NZM4 1560 aa32.21■■■□□ 2.75
LINC01220-201ENST00000558575 DCAF8L2P0C7V8 631 aa32.06■■■□□ 2.72
LINC01220-201ENST00000558575 MYO15BQ96JP2 1530 aa31.81■■■□□ 2.68
LINC01220-201ENST00000558575 CC2D2AQ9P2K1 1620 aa31.71■■■□□ 2.67
LINC01220-201ENST00000558575 CECR2Q9BXF3 1484 aa31.65■■■□□ 2.66
LINC01220-201ENST00000558575 SHROOM4Q9ULL8 1493 aa31.52■■■□□ 2.64
LINC01220-201ENST00000558575 DNAJC5Q9H3Z4 198 aa31.43■■■□□ 2.62
LINC01220-201ENST00000558575 EIF4G1Q04637 1599 aaKnown RBP31.41■■■□□ 2.62
LINC01220-201ENST00000558575 SCRIBQ14160 1630 aa31.24■■■□□ 2.59
LINC01220-201ENST00000558575 ZCCHC6Q5VYS8 1495 aaKnown RBP31.14■■■□□ 2.57
LINC01220-201ENST00000558575 DCAF1Q9Y4B6 1507 aa31.13■■■□□ 2.57
LINC01220-201ENST00000558575 CUX2O14529 1486 aa30.54■■■□□ 2.48
LINC01220-201ENST00000558575 ERCC6Q03468 1493 aa30.28■■■□□ 2.44
LINC01220-201ENST00000558575 NCAPD3P42695 1498 aa30.04■■■□□ 2.4
LINC01220-201ENST00000558575 NESP48681 1621 aa29.94■■■□□ 2.38
LINC01220-201ENST00000558575 THOC2Q8NI27 1593 aaKnown RBP29.88■■■□□ 2.37
LINC01220-201ENST00000558575 ATAD2BQ9ULI0 1458 aa29.86■■■□□ 2.37
LINC01220-201ENST00000558575 HMGXB3Q12766 1538 aa29.81■■■□□ 2.36
LINC01220-201ENST00000558575 SMARCA2P51531 1590 aa29.73■■■□□ 2.35
LINC01220-201ENST00000558575 SMARCA4P51532 1647 aa29.71■■■□□ 2.35
LINC01220-201ENST00000558575 TRIM41Q8WV44 630 aa29.69■■■□□ 2.34
LINC01220-201ENST00000558575 KIF21AQ7Z4S6 1674 aa29.66■■■□□ 2.34
LINC01220-201ENST00000558575 LAMC3Q9Y6N6 1575 aa29.56■■■□□ 2.32
LINC01220-201ENST00000558575 BAZ1BQ9UIG0 1483 aaKnown RBP29.51■■■□□ 2.31
LINC01220-201ENST00000558575 PEG3Q9GZU2 1588 aa29.4■■■□□ 2.3
LINC01220-201ENST00000558575 BAZ1AQ9NRL2 1556 aaPredicted RBP29.35■■■□□ 2.29
LINC01220-201ENST00000558575 PDS5BQ9NTI5 1447 aa29.29■■■□□ 2.28
LINC01220-201ENST00000558575 WDR62O43379 1518 aa29.2■■■□□ 2.26
LINC01220-201ENST00000558575 MRC2Q9UBG0 1479 aa29.18■■■□□ 2.26
LINC01220-201ENST00000558575 MROH2BQ7Z745 1585 aa29.13■■■□□ 2.25
LINC01220-201ENST00000558575 CADPSQ9ULU8 1353 aa29.05■■■□□ 2.24
LINC01220-201ENST00000558575 OSCARQ8IYS5 282 aa28.89■■■□□ 2.22
LINC01220-201ENST00000558575 CEP164Q9UPV0 1460 aa28.89■■■□□ 2.22
LINC01220-201ENST00000558575 RIMBP3CA6NJZ7 1639 aa28.85■■■□□ 2.21
LINC01220-201ENST00000558575 RIMBP3BA6NNM3 1639 aa28.85■■■□□ 2.21
LINC01220-201ENST00000558575 RIMBP3Q9UFD9 1639 aa28.85■■■□□ 2.21
LINC01220-201ENST00000558575 WIZO95785 1651 aa28.81■■■□□ 2.2
LINC01220-201ENST00000558575 FANCD2Q9BXW9 1451 aa28.78■■■□□ 2.2
LINC01220-201ENST00000558575 URB2Q14146 1524 aaKnown RBP28.66■■■□□ 2.18
LINC01220-201ENST00000558575 ARHGEF11O15085 1522 aa28.6■■■□□ 2.17
LINC01220-201ENST00000558575 CFTRP13569 1480 aa28.59■■■□□ 2.17
LINC01220-201ENST00000558575 RSF1Q96T23 1441 aaPredicted RBP28.51■■■□□ 2.15
LINC01220-201ENST00000558575 PRDM2Q13029 1718 aa28.49■■■□□ 2.15
LINC01220-201ENST00000558575 ZNF608Q9ULD9 1512 aaPredicted RBP28.44■■■□□ 2.14
LINC01220-201ENST00000558575 CHD1O14646 1710 aa28.35■■■□□ 2.13
LINC01220-201ENST00000558575 IFT140Q96RY7 1462 aa28.32■■■□□ 2.12
LINC01220-201ENST00000558575 EIF4G3O43432 1585 aaKnown RBP28.3■■■□□ 2.12
LINC01220-201ENST00000558575 TOP2AP11388 1531 aaKnown RBP28.3■■■□□ 2.12
LINC01220-201ENST00000558575 CYB5RLQ6IPT4 315 aa28.3■■■□□ 2.12
LINC01220-201ENST00000558575 ARAP1Q96P48 1450 aa28.27■■■□□ 2.12
LINC01220-201ENST00000558575 TRHP20396 242 aaPredicted RBP28.23■■■□□ 2.11
LINC01220-201ENST00000558575 TOPBP1Q92547 1522 aa28.18■■■□□ 2.1
LINC01220-201ENST00000558575 TARBP1Q13395 1621 aaKnown RBP28.08■■■□□ 2.09
LINC01220-201ENST00000558575 DNMBPQ6XZF7 1577 aa28.02■■■□□ 2.08
LINC01220-201ENST00000558575 AQRO60306 1485 aaKnown RBP eCLIP28.02■■■□□ 2.08
LINC01220-201ENST00000558575 AEBP2Q6ZN18 517 aaPredicted RBP28■■■□□ 2.07
LINC01220-201ENST00000558575 SUPT5HO00267 1087 aaKnown RBP27.99■■■□□ 2.07
LINC01220-201ENST00000558575 ABCC8Q09428 1581 aa27.96■■■□□ 2.07
LINC01220-201ENST00000558575 CCDC88BA6NC98 1476 aa27.95■■■□□ 2.06
LINC01220-201ENST00000558575 FBLN2P98095 1184 aa27.89■■■□□ 2.06
LINC01220-201ENST00000558575 CLASP1Q7Z460 1538 aa27.88■■■□□ 2.05
LINC01220-201ENST00000558575 POLA1P09884 1462 aaPredicted RBP27.83■■■□□ 2.05
LINC01220-201ENST00000558575 RAD54L2Q9Y4B4 1467 aa27.74■■■□□ 2.03
LINC01220-201ENST00000558575 SNAPC4Q5SXM2 1469 aa27.73■■■□□ 2.03
LINC01220-201ENST00000558575 SYNJ1O43426 1573 aa27.73■■■□□ 2.03
LINC01220-201ENST00000558575 TDRD9Q8NDG6 1382 aaKnown RBP27.68■■■□□ 2.02
LINC01220-201ENST00000558575 WDR97A6NE52 1622 aa27.65■■■□□ 2.02
LINC01220-201ENST00000558575 SOGA1O94964 1423 aa27.6■■■□□ 2.01
LINC01220-201ENST00000558575 MAGI1Q96QZ7 1491 aaPredicted RBP27.59■■■□□ 2.01
LINC01220-201ENST00000558575 GAPVD1Q14C86 1478 aa27.56■■■□□ 2
LINC01220-201ENST00000558575 FGD5Q6ZNL6 1462 aa27.54■■■□□ 2
LINC01220-201ENST00000558575 PBRM1Q86U86 1689 aa27.54■■■□□ 2
LINC01220-201ENST00000558575 CHMP7Q8WUX9 453 aaPredicted RBP27.53■■■□□ 2
LINC01220-201ENST00000558575 SYNJ2O15056 1496 aa27.51■■■□□ 2
LINC01220-201ENST00000558575 GRIN2BQ13224 1484 aa27.49■■□□□ 1.99
LINC01220-201ENST00000558575 ERCC6L2Q5T890 1561 aa27.43■■□□□ 1.98
LINC01220-201ENST00000558575 KIF13AQ9H1H9 1805 aa27.42■■□□□ 1.98
LINC01220-201ENST00000558575 CUX1P39880 1505 aa27.41■■□□□ 1.98
LINC01220-201ENST00000558575 ABCA5Q8WWZ7 1642 aa27.3■■□□□ 1.96
LINC01220-201ENST00000558575 CEP170Q5SW79 1584 aa27.26■■□□□ 1.95
LINC01220-201ENST00000558575 SHROOM2Q13796 1616 aa27.2■■□□□ 1.95
LINC01220-201ENST00000558575 GRIN2AQ12879 1464 aa27.18■■□□□ 1.94
LINC01220-201ENST00000558575 ABCA10Q8WWZ4 1543 aa27.16■■□□□ 1.94
LINC01220-201ENST00000558575 ADAMTS12P58397 1594 aa27.14■■□□□ 1.93
LINC01220-201ENST00000558575 NUP160Q12769 1436 aa27.11■■□□□ 1.93
LINC01220-201ENST00000558575 ILDR1Q86SU0 546 aaPredicted RBP26.98■■□□□ 1.91
LINC01220-201ENST00000558575 DIP2BQ9P265 1576 aa26.95■■□□□ 1.9
LINC01220-201ENST00000558575 KDM4FA0A1W2PPD8 638 aa26.94■■□□□ 1.9
LINC01220-201ENST00000558575 ABCC10Q5T3U5 1492 aa26.93■■□□□ 1.9
LINC01220-201ENST00000558575 KDM6BO15054 1643 aa26.91■■□□□ 1.9
LINC01220-201ENST00000558575 TSPOAP1O95153 1857 aa26.91■■□□□ 1.9
LINC01220-201ENST00000558575 MAPKBP1O60336 1514 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms