Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.07■□□□□ 0
CSNK1G3Q9Y6M4 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 KLF2P2-201ENST00000416807 1039 ntBASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 AL603832.2-201ENST00000566195 2125 ntBASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 AC006453.4-201ENST00000636949 1252 ntBASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.06■□□□□ 0
CSNK1G3Q9Y6M4 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.05■□□□□ 0
CSNK1G3Q9Y6M4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.05■□□□□ 0
CSNK1G3Q9Y6M4 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.05■□□□□ 0
CSNK1G3Q9Y6M4 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
CSNK1G3Q9Y6M4 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CSNK1G3Q9Y6M4 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
CSNK1G3Q9Y6M4 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
CSNK1G3Q9Y6M4 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
CSNK1G3Q9Y6M4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.05■□□□□ 0
CSNK1G3Q9Y6M4 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CSNK1G3Q9Y6M4 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
CSNK1G3Q9Y6M4 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
CSNK1G3Q9Y6M4 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
CSNK1G3Q9Y6M4 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
CSNK1G3Q9Y6M4 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.05■□□□□ -0
CSNK1G3Q9Y6M4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CSNK1G3Q9Y6M4 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CSNK1G3Q9Y6M4 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
CSNK1G3Q9Y6M4 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.05■□□□□ -0
CSNK1G3Q9Y6M4 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
CSNK1G3Q9Y6M4 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.05■□□□□ -0
CSNK1G3Q9Y6M4 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CSNK1G3Q9Y6M4 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.05■□□□□ -0
CSNK1G3Q9Y6M4 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CSNK1G3Q9Y6M4 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.05■□□□□ -0
CSNK1G3Q9Y6M4 AC004066.1-201ENST00000502488 802 ntBASIC15.05■□□□□ -0
CSNK1G3Q9Y6M4 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.05■□□□□ -0
CSNK1G3Q9Y6M4 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.05■□□□□ -0
CSNK1G3Q9Y6M4 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
CSNK1G3Q9Y6M4 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.05■□□□□ -0
CSNK1G3Q9Y6M4 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms