RNA–Protein interactions for RNA: ENST00000425345.1

EPDR1-203, Transcript of ependymin related 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPDR1, Length 947 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPDR1-203ENST00000425345 NISCHQ9Y2I1 1504 aa36.7■■■■□ 3.47
EPDR1-203ENST00000425345 CCDC180Q9P1Z9 1646 aa32.8■■■□□ 2.84
EPDR1-203ENST00000425345 ABCC9O60706 1549 aa32.25■■■□□ 2.75
EPDR1-203ENST00000425345 RB1CC1Q8TDY2 1594 aa31.02■■■□□ 2.56
EPDR1-203ENST00000425345 NACADO15069 1562 aa30.96■■■□□ 2.55
EPDR1-203ENST00000425345 MYO15BQ96JP2 1530 aa30.77■■■□□ 2.52
EPDR1-203ENST00000425345 DCAF8L2P0C7V8 631 aa30.65■■■□□ 2.5
EPDR1-203ENST00000425345 ZCCHC6Q5VYS8 1495 aaKnown RBP30.5■■■□□ 2.47
EPDR1-203ENST00000425345 DCAF1Q9Y4B6 1507 aa30.47■■■□□ 2.47
EPDR1-203ENST00000425345 UNC13AQ9UPW8 1703 aa30.18■■■□□ 2.42
EPDR1-203ENST00000425345 PABPN1Q86U42 306 aaKnown RBP eCLIP30.07■■■□□ 2.4
EPDR1-203ENST00000425345 BICRAQ9NZM4 1560 aa30.03■■■□□ 2.4
EPDR1-203ENST00000425345 SHROOM4Q9ULL8 1493 aa29.91■■■□□ 2.38
EPDR1-203ENST00000425345 DNAJC5BQ9UF47 199 aa29.89■■■□□ 2.38
EPDR1-203ENST00000425345 SCRIBQ14160 1630 aa29.74■■■□□ 2.35
EPDR1-203ENST00000425345 EIF4G1Q04637 1599 aaKnown RBP29.28■■■□□ 2.28
EPDR1-203ENST00000425345 CC2D2AQ9P2K1 1620 aa29.21■■■□□ 2.27
EPDR1-203ENST00000425345 CECR2Q9BXF3 1484 aa29.1■■■□□ 2.25
EPDR1-203ENST00000425345 NCAPD3P42695 1498 aa28.57■■■□□ 2.16
EPDR1-203ENST00000425345 SMARCA4P51532 1647 aa28.51■■■□□ 2.15
EPDR1-203ENST00000425345 BAZ1AQ9NRL2 1556 aaPredicted RBP28.5■■■□□ 2.15
EPDR1-203ENST00000425345 ATAD2BQ9ULI0 1458 aa28.47■■■□□ 2.15
EPDR1-203ENST00000425345 SMARCA2P51531 1590 aa28.47■■■□□ 2.15
EPDR1-203ENST00000425345 HMGXB3Q12766 1538 aa28.38■■■□□ 2.13
EPDR1-203ENST00000425345 PEG3Q9GZU2 1588 aa28.33■■■□□ 2.13
EPDR1-203ENST00000425345 BAZ1BQ9UIG0 1483 aaKnown RBP28.21■■■□□ 2.11
EPDR1-203ENST00000425345 MROH2BQ7Z745 1585 aa28.2■■■□□ 2.11
EPDR1-203ENST00000425345 ERCC6Q03468 1493 aa27.89■■■□□ 2.05
EPDR1-203ENST00000425345 LAMC3Q9Y6N6 1575 aa27.84■■■□□ 2.05
EPDR1-203ENST00000425345 WIZO95785 1651 aa27.84■■■□□ 2.05
EPDR1-203ENST00000425345 RSF1Q96T23 1441 aaPredicted RBP27.83■■■□□ 2.05
EPDR1-203ENST00000425345 CUX2O14529 1486 aa27.81■■■□□ 2.04
EPDR1-203ENST00000425345 NESP48681 1621 aa27.8■■■□□ 2.04
EPDR1-203ENST00000425345 CADPSQ9ULU8 1353 aa27.7■■■□□ 2.02
EPDR1-203ENST00000425345 PDS5BQ9NTI5 1447 aa27.69■■■□□ 2.02
EPDR1-203ENST00000425345 TOP2AP11388 1531 aaKnown RBP27.62■■■□□ 2.01
EPDR1-203ENST00000425345 THOC2Q8NI27 1593 aaKnown RBP27.51■■□□□ 1.99
EPDR1-203ENST00000425345 CFTRP13569 1480 aa27.47■■□□□ 1.99
EPDR1-203ENST00000425345 KIF21AQ7Z4S6 1674 aa27.46■■□□□ 1.99
EPDR1-203ENST00000425345 MRC2Q9UBG0 1479 aa27.36■■□□□ 1.97
EPDR1-203ENST00000425345 CEP164Q9UPV0 1460 aa27.32■■□□□ 1.96
EPDR1-203ENST00000425345 FANCD2Q9BXW9 1451 aa27.32■■□□□ 1.96
EPDR1-203ENST00000425345 DNAJC5Q9H3Z4 198 aa27.31■■□□□ 1.96
EPDR1-203ENST00000425345 WDR62O43379 1518 aa27.29■■□□□ 1.96
EPDR1-203ENST00000425345 CCDC88BA6NC98 1476 aa27.28■■□□□ 1.96
EPDR1-203ENST00000425345 PRDM2Q13029 1718 aa27.16■■□□□ 1.94
EPDR1-203ENST00000425345 URB2Q14146 1524 aaKnown RBP27.03■■□□□ 1.92
EPDR1-203ENST00000425345 ABCC8Q09428 1581 aa26.96■■□□□ 1.91
EPDR1-203ENST00000425345 TOPBP1Q92547 1522 aa26.84■■□□□ 1.89
EPDR1-203ENST00000425345 IFT140Q96RY7 1462 aa26.81■■□□□ 1.88
EPDR1-203ENST00000425345 DNMBPQ6XZF7 1577 aa26.8■■□□□ 1.88
EPDR1-203ENST00000425345 SUPT5HO00267 1087 aaKnown RBP26.74■■□□□ 1.87
EPDR1-203ENST00000425345 ZNF608Q9ULD9 1512 aaPredicted RBP26.6■■□□□ 1.85
EPDR1-203ENST00000425345 OSCARQ8IYS5 282 aa26.59■■□□□ 1.85
EPDR1-203ENST00000425345 POLA1P09884 1462 aaPredicted RBP26.59■■□□□ 1.85
EPDR1-203ENST00000425345 TARBP1Q13395 1621 aaKnown RBP26.57■■□□□ 1.84
EPDR1-203ENST00000425345 EIF4G3O43432 1585 aaKnown RBP26.5■■□□□ 1.83
EPDR1-203ENST00000425345 SOGA1O94964 1423 aa26.49■■□□□ 1.83
EPDR1-203ENST00000425345 CUX1P39880 1505 aa26.49■■□□□ 1.83
EPDR1-203ENST00000425345 WDR97A6NE52 1622 aa26.48■■□□□ 1.83
EPDR1-203ENST00000425345 FGD5Q6ZNL6 1462 aa26.45■■□□□ 1.82
EPDR1-203ENST00000425345 AQRO60306 1485 aaKnown RBP eCLIP26.42■■□□□ 1.82
EPDR1-203ENST00000425345 RAD54L2Q9Y4B4 1467 aa26.41■■□□□ 1.82
EPDR1-203ENST00000425345 TDRD9Q8NDG6 1382 aaKnown RBP26.33■■□□□ 1.8
EPDR1-203ENST00000425345 ABCA10Q8WWZ4 1543 aa26.26■■□□□ 1.79
EPDR1-203ENST00000425345 GRIN2BQ13224 1484 aa26.25■■□□□ 1.79
EPDR1-203ENST00000425345 WRNQ14191 1432 aaPredicted RBP eCLIP26.25■■□□□ 1.79
EPDR1-203ENST00000425345 MAGI1Q96QZ7 1491 aaPredicted RBP26.24■■□□□ 1.79
EPDR1-203ENST00000425345 TOP2BQ02880 1626 aa26.23■■□□□ 1.79
EPDR1-203ENST00000425345 BIVM-ERCC5R4GMW8 1640 aa26.21■■□□□ 1.79
EPDR1-203ENST00000425345 GAPVD1Q14C86 1478 aa26.19■■□□□ 1.78
EPDR1-203ENST00000425345 CHD1O14646 1710 aa26.18■■□□□ 1.78
EPDR1-203ENST00000425345 SNAPC4Q5SXM2 1469 aa26.17■■□□□ 1.78
EPDR1-203ENST00000425345 FBLN2P98095 1184 aa26.15■■□□□ 1.78
EPDR1-203ENST00000425345 ABCA5Q8WWZ7 1642 aa26.13■■□□□ 1.77
EPDR1-203ENST00000425345 SYNJ2O15056 1496 aa26.12■■□□□ 1.77
EPDR1-203ENST00000425345 CHMP7Q8WUX9 453 aaPredicted RBP26.12■■□□□ 1.77
EPDR1-203ENST00000425345 SYNJ1O43426 1573 aa26.12■■□□□ 1.77
EPDR1-203ENST00000425345 TRIM41Q8WV44 630 aa26.09■■□□□ 1.77
EPDR1-203ENST00000425345 ARHGEF11O15085 1522 aa26.08■■□□□ 1.77
EPDR1-203ENST00000425345 RIMBP3CA6NJZ7 1639 aa26.07■■□□□ 1.76
EPDR1-203ENST00000425345 RIMBP3BA6NNM3 1639 aa26.07■■□□□ 1.76
EPDR1-203ENST00000425345 RIMBP3Q9UFD9 1639 aa26.07■■□□□ 1.76
EPDR1-203ENST00000425345 PBRM1Q86U86 1689 aa26.06■■□□□ 1.76
EPDR1-203ENST00000425345 CLASP1Q7Z460 1538 aa25.98■■□□□ 1.75
EPDR1-203ENST00000425345 ERICH3Q5RHP9 1530 aa25.96■■□□□ 1.75
EPDR1-203ENST00000425345 FHAD1B1AJZ9 1412 aa25.91■■□□□ 1.74
EPDR1-203ENST00000425345 ADAMTS12P58397 1594 aa25.89■■□□□ 1.73
EPDR1-203ENST00000425345 GRIN2AQ12879 1464 aa25.88■■□□□ 1.73
EPDR1-203ENST00000425345 CYB5RLQ6IPT4 315 aa25.84■■□□□ 1.73
EPDR1-203ENST00000425345 ARAP1Q96P48 1450 aa25.83■■□□□ 1.73
EPDR1-203ENST00000425345 NUP160Q12769 1436 aa25.82■■□□□ 1.72
EPDR1-203ENST00000425345 KIF27Q86VH2 1401 aa25.77■■□□□ 1.72
EPDR1-203ENST00000425345 CEP170Q5SW79 1584 aa25.7■■□□□ 1.71
EPDR1-203ENST00000425345 IGF1RP08069 1367 aa25.69■■□□□ 1.7
EPDR1-203ENST00000425345 SHROOM2Q13796 1616 aa25.63■■□□□ 1.69
EPDR1-203ENST00000425345 CUL7Q14999 1698 aa25.62■■□□□ 1.69
EPDR1-203ENST00000425345 JPH4Q96JJ6 628 aa25.54■■□□□ 1.68
EPDR1-203ENST00000425345 CARMIL1Q5VZK9 1371 aa25.51■■□□□ 1.67
EPDR1-203ENST00000425345 RUSC2Q8N2Y8 1516 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms