RNA–Protein interactions for RNA: ENST00000539040.5

RIT1-205, Transcript of Ras like without CAAX 1, humanhuman

TSL 2 BASIC

Gene RIT1, Length 919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIT1-205ENST00000539040 NISCHQ9Y2I1 1504 aa37.35■■■■□ 3.57
RIT1-205ENST00000539040 CCDC180Q9P1Z9 1646 aa33.6■■■□□ 2.97
RIT1-205ENST00000539040 ABCC9O60706 1549 aa33.38■■■□□ 2.93
RIT1-205ENST00000539040 RB1CC1Q8TDY2 1594 aa31.85■■■□□ 2.69
RIT1-205ENST00000539040 NACADO15069 1562 aa31.61■■■□□ 2.65
RIT1-205ENST00000539040 DCAF8L2P0C7V8 631 aa31.36■■■□□ 2.61
RIT1-205ENST00000539040 UNC13AQ9UPW8 1703 aa31.29■■■□□ 2.6
RIT1-205ENST00000539040 MYO15BQ96JP2 1530 aa31.15■■■□□ 2.58
RIT1-205ENST00000539040 ZCCHC6Q5VYS8 1495 aaKnown RBP31.04■■■□□ 2.56
RIT1-205ENST00000539040 DNAJC5BQ9UF47 199 aa30.99■■■□□ 2.55
RIT1-205ENST00000539040 PABPN1Q86U42 306 aaKnown RBP eCLIP30.98■■■□□ 2.55
RIT1-205ENST00000539040 BICRAQ9NZM4 1560 aa30.91■■■□□ 2.54
RIT1-205ENST00000539040 DCAF1Q9Y4B6 1507 aa30.83■■■□□ 2.53
RIT1-205ENST00000539040 SCRIBQ14160 1630 aa30.65■■■□□ 2.5
RIT1-205ENST00000539040 SHROOM4Q9ULL8 1493 aa30.46■■■□□ 2.47
RIT1-205ENST00000539040 CC2D2AQ9P2K1 1620 aa30.19■■■□□ 2.42
RIT1-205ENST00000539040 EIF4G1Q04637 1599 aaKnown RBP30.15■■■□□ 2.42
RIT1-205ENST00000539040 CECR2Q9BXF3 1484 aa30.02■■■□□ 2.4
RIT1-205ENST00000539040 SMARCA4P51532 1647 aa29.2■■■□□ 2.27
RIT1-205ENST00000539040 NCAPD3P42695 1498 aa29.09■■■□□ 2.25
RIT1-205ENST00000539040 ATAD2BQ9ULI0 1458 aa29.08■■■□□ 2.25
RIT1-205ENST00000539040 SMARCA2P51531 1590 aa29.06■■■□□ 2.24
RIT1-205ENST00000539040 BAZ1AQ9NRL2 1556 aaPredicted RBP29.03■■■□□ 2.24
RIT1-205ENST00000539040 HMGXB3Q12766 1538 aa29.03■■■□□ 2.24
RIT1-205ENST00000539040 BAZ1BQ9UIG0 1483 aaKnown RBP28.87■■■□□ 2.21
RIT1-205ENST00000539040 PEG3Q9GZU2 1588 aa28.86■■■□□ 2.21
RIT1-205ENST00000539040 ERCC6Q03468 1493 aa28.83■■■□□ 2.21
RIT1-205ENST00000539040 MROH2BQ7Z745 1585 aa28.8■■■□□ 2.2
RIT1-205ENST00000539040 NESP48681 1621 aa28.71■■■□□ 2.19
RIT1-205ENST00000539040 CUX2O14529 1486 aa28.68■■■□□ 2.18
RIT1-205ENST00000539040 WIZO95785 1651 aa28.55■■■□□ 2.16
RIT1-205ENST00000539040 LAMC3Q9Y6N6 1575 aa28.54■■■□□ 2.16
RIT1-205ENST00000539040 THOC2Q8NI27 1593 aaKnown RBP28.5■■■□□ 2.15
RIT1-205ENST00000539040 KIF21AQ7Z4S6 1674 aa28.49■■■□□ 2.15
RIT1-205ENST00000539040 DNAJC5Q9H3Z4 198 aa28.33■■■□□ 2.13
RIT1-205ENST00000539040 PDS5BQ9NTI5 1447 aa28.27■■■□□ 2.12
RIT1-205ENST00000539040 CADPSQ9ULU8 1353 aa28.21■■■□□ 2.11
RIT1-205ENST00000539040 RSF1Q96T23 1441 aaPredicted RBP28.18■■■□□ 2.1
RIT1-205ENST00000539040 TOP2AP11388 1531 aaKnown RBP28.18■■■□□ 2.1
RIT1-205ENST00000539040 MRC2Q9UBG0 1479 aa28.11■■■□□ 2.09
RIT1-205ENST00000539040 WDR62O43379 1518 aa28.07■■■□□ 2.08
RIT1-205ENST00000539040 CEP164Q9UPV0 1460 aa28.04■■■□□ 2.08
RIT1-205ENST00000539040 FANCD2Q9BXW9 1451 aa27.99■■■□□ 2.07
RIT1-205ENST00000539040 PRDM2Q13029 1718 aa27.98■■■□□ 2.07
RIT1-205ENST00000539040 CFTRP13569 1480 aa27.96■■■□□ 2.07
RIT1-205ENST00000539040 URB2Q14146 1524 aaKnown RBP27.77■■■□□ 2.04
RIT1-205ENST00000539040 CCDC88BA6NC98 1476 aa27.75■■■□□ 2.03
RIT1-205ENST00000539040 TOPBP1Q92547 1522 aa27.49■■□□□ 1.99
RIT1-205ENST00000539040 DNMBPQ6XZF7 1577 aa27.44■■□□□ 1.98
RIT1-205ENST00000539040 IFT140Q96RY7 1462 aa27.42■■□□□ 1.98
RIT1-205ENST00000539040 ZNF608Q9ULD9 1512 aaPredicted RBP27.39■■□□□ 1.98
RIT1-205ENST00000539040 EIF4G3O43432 1585 aaKnown RBP27.38■■□□□ 1.97
RIT1-205ENST00000539040 ABCC8Q09428 1581 aa27.35■■□□□ 1.97
RIT1-205ENST00000539040 TRIM41Q8WV44 630 aa27.28■■□□□ 1.96
RIT1-205ENST00000539040 TARBP1Q13395 1621 aaKnown RBP27.27■■□□□ 1.96
RIT1-205ENST00000539040 OSCARQ8IYS5 282 aa27.23■■□□□ 1.95
RIT1-205ENST00000539040 POLA1P09884 1462 aaPredicted RBP27.21■■□□□ 1.95
RIT1-205ENST00000539040 CHD1O14646 1710 aa27.19■■□□□ 1.94
RIT1-205ENST00000539040 RIMBP3CA6NJZ7 1639 aa27.12■■□□□ 1.93
RIT1-205ENST00000539040 RIMBP3BA6NNM3 1639 aa27.12■■□□□ 1.93
RIT1-205ENST00000539040 RIMBP3Q9UFD9 1639 aa27.12■■□□□ 1.93
RIT1-205ENST00000539040 AQRO60306 1485 aaKnown RBP eCLIP27.11■■□□□ 1.935e-6■■□□□ 14.3
RIT1-205ENST00000539040 RAD54L2Q9Y4B4 1467 aa27.09■■□□□ 1.93
RIT1-205ENST00000539040 FGD5Q6ZNL6 1462 aa27.08■■□□□ 1.93
RIT1-205ENST00000539040 CUX1P39880 1505 aa27.08■■□□□ 1.93
RIT1-205ENST00000539040 SUPT5HO00267 1087 aaKnown RBP27.02■■□□□ 1.92
RIT1-205ENST00000539040 WDR97A6NE52 1622 aa27.01■■□□□ 1.92
RIT1-205ENST00000539040 SOGA1O94964 1423 aa27■■□□□ 1.91
RIT1-205ENST00000539040 ARHGEF11O15085 1522 aa27■■□□□ 1.91
RIT1-205ENST00000539040 TDRD9Q8NDG6 1382 aaKnown RBP26.94■■□□□ 1.9
RIT1-205ENST00000539040 SNAPC4Q5SXM2 1469 aa26.93■■□□□ 1.9
RIT1-205ENST00000539040 PBRM1Q86U86 1689 aa26.92■■□□□ 1.9
RIT1-205ENST00000539040 FBLN2P98095 1184 aa26.87■■□□□ 1.89
RIT1-205ENST00000539040 MAGI1Q96QZ7 1491 aaPredicted RBP26.81■■□□□ 1.88
RIT1-205ENST00000539040 GRIN2BQ13224 1484 aa26.81■■□□□ 1.88
RIT1-205ENST00000539040 ABCA5Q8WWZ7 1642 aa26.8■■□□□ 1.88
RIT1-205ENST00000539040 SYNJ1O43426 1573 aa26.77■■□□□ 1.88
RIT1-205ENST00000539040 CLASP1Q7Z460 1538 aa26.76■■□□□ 1.87
RIT1-205ENST00000539040 BIVM-ERCC5R4GMW8 1640 aa26.76■■□□□ 1.87
RIT1-205ENST00000539040 ABCA10Q8WWZ4 1543 aa26.74■■□□□ 1.87
RIT1-205ENST00000539040 GAPVD1Q14C86 1478 aa26.74■■□□□ 1.87
RIT1-205ENST00000539040 ARAP1Q96P48 1450 aa26.74■■□□□ 1.87
RIT1-205ENST00000539040 SYNJ2O15056 1496 aa26.72■■□□□ 1.87
RIT1-205ENST00000539040 TOP2BQ02880 1626 aa26.71■■□□□ 1.87
RIT1-205ENST00000539040 CHMP7Q8WUX9 453 aaPredicted RBP26.66■■□□□ 1.86
RIT1-205ENST00000539040 CYB5RLQ6IPT4 315 aa26.63■■□□□ 1.85
RIT1-205ENST00000539040 WRNQ14191 1432 aaPredicted RBP eCLIP26.63■■□□□ 1.85
RIT1-205ENST00000539040 ADAMTS12P58397 1594 aa26.61■■□□□ 1.85
RIT1-205ENST00000539040 GRIN2AQ12879 1464 aa26.5■■□□□ 1.83
RIT1-205ENST00000539040 CEP170Q5SW79 1584 aa26.46■■□□□ 1.83
RIT1-205ENST00000539040 ERICH3Q5RHP9 1530 aa26.43■■□□□ 1.82
RIT1-205ENST00000539040 FHAD1B1AJZ9 1412 aa26.38■■□□□ 1.81
RIT1-205ENST00000539040 ERCC6L2Q5T890 1561 aa26.37■■□□□ 1.81
RIT1-205ENST00000539040 NUP160Q12769 1436 aa26.36■■□□□ 1.81
RIT1-205ENST00000539040 SHROOM2Q13796 1616 aa26.33■■□□□ 1.81
RIT1-205ENST00000539040 TRHP20396 242 aaPredicted RBP26.33■■□□□ 1.81
RIT1-205ENST00000539040 RUSC2Q8N2Y8 1516 aa26.24■■□□□ 1.79
RIT1-205ENST00000539040 CUL7Q14999 1698 aa26.17■■□□□ 1.78
RIT1-205ENST00000539040 KIF27Q86VH2 1401 aa26.09■■□□□ 1.77
RIT1-205ENST00000539040 PRG4Q92954 1404 aaPredicted RBP26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms