Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 AC106881.1-201ENST00000605849 3329 ntBASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BLOC1S4Q9NUP1 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 AL137783.1-201ENST00000623494 1896 ntBASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 AL139094.1-201ENST00000405549 1188 ntBASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
BLOC1S4Q9NUP1 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
BLOC1S4Q9NUP1 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.02■□□□□ 0.32
BLOC1S4Q9NUP1 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
BLOC1S4Q9NUP1 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BLOC1S4Q9NUP1 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
BLOC1S4Q9NUP1 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BLOC1S4Q9NUP1 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BLOC1S4Q9NUP1 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.02■□□□□ 0.32
BLOC1S4Q9NUP1 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.02■□□□□ 0.32
BLOC1S4Q9NUP1 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.02■□□□□ 0.32
BLOC1S4Q9NUP1 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BLOC1S4Q9NUP1 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BLOC1S4Q9NUP1 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
BLOC1S4Q9NUP1 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.02■□□□□ 0.32
BLOC1S4Q9NUP1 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.02■□□□□ 0.32
BLOC1S4Q9NUP1 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BLOC1S4Q9NUP1 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BLOC1S4Q9NUP1 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.02■□□□□ 0.32
BLOC1S4Q9NUP1 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
BLOC1S4Q9NUP1 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.02■□□□□ 0.32
BLOC1S4Q9NUP1 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BLOC1S4Q9NUP1 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
BLOC1S4Q9NUP1 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
BLOC1S4Q9NUP1 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms