Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
CGREF1Q99674 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CGREF1Q99674 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CGREF1Q99674 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.69□□□□□ -0.06
CGREF1Q99674 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CGREF1Q99674 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CGREF1Q99674 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CGREF1Q99674 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CGREF1Q99674 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CGREF1Q99674 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.69□□□□□ -0.06
CGREF1Q99674 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CGREF1Q99674 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.69□□□□□ -0.06
CGREF1Q99674 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.69□□□□□ -0.06
CGREF1Q99674 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CGREF1Q99674 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CGREF1Q99674 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CGREF1Q99674 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.69□□□□□ -0.06
CGREF1Q99674 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.69□□□□□ -0.06
CGREF1Q99674 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CGREF1Q99674 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CGREF1Q99674 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CGREF1Q99674 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CGREF1Q99674 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CGREF1Q99674 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CGREF1Q99674 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CGREF1Q99674 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CGREF1Q99674 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.68□□□□□ -0.06
CGREF1Q99674 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.68□□□□□ -0.06
CGREF1Q99674 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.68□□□□□ -0.06
CGREF1Q99674 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CGREF1Q99674 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CGREF1Q99674 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CGREF1Q99674 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
CGREF1Q99674 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CGREF1Q99674 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CGREF1Q99674 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CGREF1Q99674 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CGREF1Q99674 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CGREF1Q99674 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.68□□□□□ -0.06
CGREF1Q99674 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.68□□□□□ -0.06
CGREF1Q99674 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.68□□□□□ -0.06
CGREF1Q99674 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.68□□□□□ -0.06
CGREF1Q99674 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.68□□□□□ -0.06
CGREF1Q99674 BX640515.1-201ENST00000617215 977 ntBASIC14.68□□□□□ -0.06
CGREF1Q99674 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.68□□□□□ -0.06
CGREF1Q99674 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CGREF1Q99674 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CGREF1Q99674 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.68□□□□□ -0.06
CGREF1Q99674 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
CGREF1Q99674 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CGREF1Q99674 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CGREF1Q99674 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CGREF1Q99674 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CGREF1Q99674 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.68□□□□□ -0.06
CGREF1Q99674 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CGREF1Q99674 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CGREF1Q99674 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CGREF1Q99674 AC018529.2-202ENST00000611482 3087 ntBASIC14.67□□□□□ -0.06
CGREF1Q99674 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
CGREF1Q99674 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CGREF1Q99674 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CGREF1Q99674 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CGREF1Q99674 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.67□□□□□ -0.06
CGREF1Q99674 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CGREF1Q99674 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CGREF1Q99674 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.67□□□□□ -0.06
CGREF1Q99674 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
CGREF1Q99674 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CGREF1Q99674 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CGREF1Q99674 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
CGREF1Q99674 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CGREF1Q99674 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CGREF1Q99674 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CGREF1Q99674 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.67□□□□□ -0.06
CGREF1Q99674 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CGREF1Q99674 MCCD1P2-201ENST00000423228 335 ntBASIC14.67□□□□□ -0.06
CGREF1Q99674 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.67□□□□□ -0.06
CGREF1Q99674 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.67□□□□□ -0.06
CGREF1Q99674 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.67□□□□□ -0.06
CGREF1Q99674 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.67□□□□□ -0.06
CGREF1Q99674 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.67□□□□□ -0.06
CGREF1Q99674 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CGREF1Q99674 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CGREF1Q99674 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CGREF1Q99674 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CGREF1Q99674 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CGREF1Q99674 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.67□□□□□ -0.06
CGREF1Q99674 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CGREF1Q99674 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CGREF1Q99674 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CGREF1Q99674 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CGREF1Q99674 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.67□□□□□ -0.06
CGREF1Q99674 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CGREF1Q99674 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CGREF1Q99674 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CGREF1Q99674 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.66□□□□□ -0.06
CGREF1Q99674 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CGREF1Q99674 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CGREF1Q99674 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CGREF1Q99674 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms