Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC18.7■□□□□ 0.58
SCN7AQ01118 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC18.7■□□□□ 0.58
SCN7AQ01118 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCN7AQ01118 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC18.7■□□□□ 0.58
SCN7AQ01118 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SCN7AQ01118 AC136759.1-202ENST00000530858 2194 ntBASIC18.7■□□□□ 0.58
SCN7AQ01118 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCN7AQ01118 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCN7AQ01118 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCN7AQ01118 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SCN7AQ01118 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC18.7■□□□□ 0.58
SCN7AQ01118 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SCN7AQ01118 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SCN7AQ01118 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCN7AQ01118 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCN7AQ01118 SOD2-202ENST00000367054 815 ntTSL 2 BASIC18.69■□□□□ 0.58
SCN7AQ01118 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCN7AQ01118 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC18.69■□□□□ 0.58
SCN7AQ01118 SKA2-202ENST00000437036 625 ntTSL 2 BASIC18.69■□□□□ 0.58
SCN7AQ01118 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCN7AQ01118 TMCO5B-205ENST00000530020 894 ntBASIC18.69■□□□□ 0.58
SCN7AQ01118 CMC2-224ENST00000630396 481 ntTSL 5 BASIC18.69■□□□□ 0.58
SCN7AQ01118 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC18.69■□□□□ 0.58
SCN7AQ01118 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.69■□□□□ 0.58
SCN7AQ01118 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCN7AQ01118 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.69■□□□□ 0.58
SCN7AQ01118 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCN7AQ01118 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC18.69■□□□□ 0.58
SCN7AQ01118 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.69■□□□□ 0.58
SCN7AQ01118 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCN7AQ01118 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.69■□□□□ 0.58
SCN7AQ01118 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC18.69■□□□□ 0.58
SCN7AQ01118 AC239868.1-201ENST00000369385 493 ntBASIC18.69■□□□□ 0.58
SCN7AQ01118 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SCN7AQ01118 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC18.69■□□□□ 0.58
SCN7AQ01118 PTPA-215ENST00000432124 567 ntTSL 4 BASIC18.69■□□□□ 0.58
SCN7AQ01118 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCN7AQ01118 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCN7AQ01118 IGHV3-37-201ENST00000518544 340 ntBASIC18.69■□□□□ 0.58
SCN7AQ01118 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC18.69■□□□□ 0.58
SCN7AQ01118 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCN7AQ01118 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC18.69■□□□□ 0.58
SCN7AQ01118 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SCN7AQ01118 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC18.69■□□□□ 0.58
SCN7AQ01118 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SCN7AQ01118 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.69■□□□□ 0.58
SCN7AQ01118 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCN7AQ01118 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SCN7AQ01118 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCN7AQ01118 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCN7AQ01118 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.68■□□□□ 0.58
SCN7AQ01118 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCN7AQ01118 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SCN7AQ01118 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
SCN7AQ01118 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.68■□□□□ 0.58
SCN7AQ01118 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC18.68■□□□□ 0.58
SCN7AQ01118 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SCN7AQ01118 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCN7AQ01118 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCN7AQ01118 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCN7AQ01118 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SCN7AQ01118 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.68■□□□□ 0.58
SCN7AQ01118 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SCN7AQ01118 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC18.68■□□□□ 0.58
SCN7AQ01118 RN7SL258P-201ENST00000478664 300 ntBASIC18.68■□□□□ 0.58
SCN7AQ01118 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC18.68■□□□□ 0.58
SCN7AQ01118 RBM8B-201ENST00000555532 525 ntBASIC18.68■□□□□ 0.58
SCN7AQ01118 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC18.68■□□□□ 0.58
SCN7AQ01118 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SCN7AQ01118 AC103691.2-201ENST00000618824 433 ntBASIC18.68■□□□□ 0.58
SCN7AQ01118 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SCN7AQ01118 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCN7AQ01118 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.68■□□□□ 0.58
SCN7AQ01118 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC18.68■□□□□ 0.58
SCN7AQ01118 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SCN7AQ01118 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCN7AQ01118 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.68■□□□□ 0.58
SCN7AQ01118 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.68■□□□□ 0.58
SCN7AQ01118 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SCN7AQ01118 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
SCN7AQ01118 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC18.68■□□□□ 0.58
SCN7AQ01118 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.68■□□□□ 0.58
SCN7AQ01118 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCN7AQ01118 AC087481.3-201ENST00000602886 1894 ntBASIC18.68■□□□□ 0.58
SCN7AQ01118 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SCN7AQ01118 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.67■□□□□ 0.58
SCN7AQ01118 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCN7AQ01118 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SCN7AQ01118 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.67■□□□□ 0.58
SCN7AQ01118 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCN7AQ01118 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC18.67■□□□□ 0.58
SCN7AQ01118 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCN7AQ01118 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC18.67■□□□□ 0.58
SCN7AQ01118 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SCN7AQ01118 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SCN7AQ01118 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SCN7AQ01118 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC18.67■□□□□ 0.58
SCN7AQ01118 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCN7AQ01118 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SCN7AQ01118 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms