RNA–Protein interactions for RNA: ENST00000453937.2

LAMA4-209, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-209ENST00000453937 NISCHQ9Y2I1 1504 aa34.86■■■■□ 3.17
LAMA4-209ENST00000453937 CCDC180Q9P1Z9 1646 aa30.8■■■□□ 2.52
LAMA4-209ENST00000453937 ABCC9O60706 1549 aa29.66■■■□□ 2.34
LAMA4-209ENST00000453937 ZCCHC6Q5VYS8 1495 aaKnown RBP29.15■■■□□ 2.26
LAMA4-209ENST00000453937 DCAF1Q9Y4B6 1507 aa28.9■■■□□ 2.22
LAMA4-209ENST00000453937 MYO15BQ96JP2 1530 aa28.86■■■□□ 2.21
LAMA4-209ENST00000453937 NACADO15069 1562 aa28.83■■■□□ 2.21
LAMA4-209ENST00000453937 DCAF8L2P0C7V8 631 aa28.74■■■□□ 2.19
LAMA4-209ENST00000453937 RB1CC1Q8TDY2 1594 aa28.73■■■□□ 2.19
LAMA4-209ENST00000453937 UNC13AQ9UPW8 1703 aa28.17■■■□□ 2.1
LAMA4-209ENST00000453937 SCRIBQ14160 1630 aa28.08■■■□□ 2.09
LAMA4-209ENST00000453937 BICRAQ9NZM4 1560 aa27.96■■■□□ 2.07
LAMA4-209ENST00000453937 PABPN1Q86U42 306 aaKnown RBP eCLIP27.76■■■□□ 2.03
LAMA4-209ENST00000453937 DNAJC5BQ9UF47 199 aa27.7■■■□□ 2.02
LAMA4-209ENST00000453937 SHROOM4Q9ULL8 1493 aa27.68■■■□□ 2.02
LAMA4-209ENST00000453937 CECR2Q9BXF3 1484 aa27.13■■□□□ 1.93
LAMA4-209ENST00000453937 EIF4G1Q04637 1599 aaKnown RBP27.1■■□□□ 1.93
LAMA4-209ENST00000453937 SMARCA4P51532 1647 aa26.95■■□□□ 1.91
LAMA4-209ENST00000453937 BAZ1AQ9NRL2 1556 aaPredicted RBP26.95■■□□□ 1.9
LAMA4-209ENST00000453937 MROH2BQ7Z745 1585 aa26.88■■□□□ 1.89
LAMA4-209ENST00000453937 CC2D2AQ9P2K1 1620 aa26.88■■□□□ 1.89
LAMA4-209ENST00000453937 PEG3Q9GZU2 1588 aa26.73■■□□□ 1.87
LAMA4-209ENST00000453937 RSF1Q96T23 1441 aaPredicted RBP26.73■■□□□ 1.87
LAMA4-209ENST00000453937 ATAD2BQ9ULI0 1458 aa26.69■■□□□ 1.86
LAMA4-209ENST00000453937 SMARCA2P51531 1590 aa26.64■■□□□ 1.86
LAMA4-209ENST00000453937 NCAPD3P42695 1498 aa26.62■■□□□ 1.85
LAMA4-209ENST00000453937 WIZO95785 1651 aa26.6■■□□□ 1.85
LAMA4-209ENST00000453937 HMGXB3Q12766 1538 aa26.53■■□□□ 1.84
LAMA4-209ENST00000453937 BAZ1BQ9UIG0 1483 aaKnown RBP26.43■■□□□ 1.82
LAMA4-209ENST00000453937 TOP2AP11388 1531 aaKnown RBP26.34■■□□□ 1.81
LAMA4-209ENST00000453937 SUPT5HO00267 1087 aaKnown RBP26.23■■□□□ 1.79
LAMA4-209ENST00000453937 CCDC88BA6NC98 1476 aa26.03■■□□□ 1.76
LAMA4-209ENST00000453937 NESP48681 1621 aa25.84■■□□□ 1.73
LAMA4-209ENST00000453937 CADPSQ9ULU8 1353 aa25.83■■□□□ 1.73
LAMA4-209ENST00000453937 LAMC3Q9Y6N6 1575 aa25.82■■□□□ 1.72
LAMA4-209ENST00000453937 CFTRP13569 1480 aa25.8■■□□□ 1.72
LAMA4-209ENST00000453937 PRDM2Q13029 1718 aa25.64■■□□□ 1.7
LAMA4-209ENST00000453937 DNAJC5Q9H3Z4 198 aa25.59■■□□□ 1.69
LAMA4-209ENST00000453937 PDS5BQ9NTI5 1447 aa25.58■■□□□ 1.69
LAMA4-209ENST00000453937 KIF21AQ7Z4S6 1674 aa25.55■■□□□ 1.68
LAMA4-209ENST00000453937 FANCD2Q9BXW9 1451 aa25.53■■□□□ 1.68
LAMA4-209ENST00000453937 ERCC6Q03468 1493 aa25.45■■□□□ 1.66
LAMA4-209ENST00000453937 CEP164Q9UPV0 1460 aa25.43■■□□□ 1.66
LAMA4-209ENST00000453937 THOC2Q8NI27 1593 aaKnown RBP25.38■■□□□ 1.65
LAMA4-209ENST00000453937 MRC2Q9UBG0 1479 aa25.33■■□□□ 1.65
LAMA4-209ENST00000453937 URB2Q14146 1524 aaKnown RBP25.3■■□□□ 1.64
LAMA4-209ENST00000453937 WDR62O43379 1518 aa25.27■■□□□ 1.64
LAMA4-209ENST00000453937 ABCC8Q09428 1581 aa25.19■■□□□ 1.62
LAMA4-209ENST00000453937 DNMBPQ6XZF7 1577 aa25.19■■□□□ 1.62
LAMA4-209ENST00000453937 CUX1P39880 1505 aa25.19■■□□□ 1.62
LAMA4-209ENST00000453937 TOPBP1Q92547 1522 aa25.19■■□□□ 1.62
LAMA4-209ENST00000453937 WRNQ14191 1432 aaPredicted RBP eCLIP25.13■■□□□ 1.61
LAMA4-209ENST00000453937 CUX2O14529 1486 aa25.11■■□□□ 1.61
LAMA4-209ENST00000453937 SYNJ1O43426 1573 aa25.1■■□□□ 1.61
LAMA4-209ENST00000453937 BIVM-ERCC5R4GMW8 1640 aa25.08■■□□□ 1.61
LAMA4-209ENST00000453937 TOP2BQ02880 1626 aa25.08■■□□□ 1.6
LAMA4-209ENST00000453937 POLA1P09884 1462 aaPredicted RBP25.01■■□□□ 1.59
LAMA4-209ENST00000453937 FGD5Q6ZNL6 1462 aa24.99■■□□□ 1.59
LAMA4-209ENST00000453937 TARBP1Q13395 1621 aaKnown RBP24.93■■□□□ 1.58
LAMA4-209ENST00000453937 IFT140Q96RY7 1462 aa24.89■■□□□ 1.58
LAMA4-209ENST00000453937 RAD54L2Q9Y4B4 1467 aa24.89■■□□□ 1.57
LAMA4-209ENST00000453937 SOGA1O94964 1423 aa24.87■■□□□ 1.57
LAMA4-209ENST00000453937 CHIC1Q5VXU3 224 aa24.84■■□□□ 1.57
LAMA4-209ENST00000453937 WDR97A6NE52 1622 aa24.83■■□□□ 1.57
LAMA4-209ENST00000453937 ABCA10Q8WWZ4 1543 aa24.8■■□□□ 1.56
LAMA4-209ENST00000453937 ZNF608Q9ULD9 1512 aaPredicted RBP24.79■■□□□ 1.56
LAMA4-209ENST00000453937 TRIM41Q8WV44 630 aa24.75■■□□□ 1.55
LAMA4-209ENST00000453937 EIF4G3O43432 1585 aaKnown RBP24.69■■□□□ 1.54
LAMA4-209ENST00000453937 TDRD9Q8NDG6 1382 aaKnown RBP24.68■■□□□ 1.54
LAMA4-209ENST00000453937 ABCA5Q8WWZ7 1642 aa24.68■■□□□ 1.54
LAMA4-209ENST00000453937 AQRO60306 1485 aaKnown RBP eCLIP24.67■■□□□ 1.54
LAMA4-209ENST00000453937 GAPVD1Q14C86 1478 aa24.6■■□□□ 1.53
LAMA4-209ENST00000453937 KIF27Q86VH2 1401 aa24.54■■□□□ 1.52
LAMA4-209ENST00000453937 PBRM1Q86U86 1689 aa24.54■■□□□ 1.52
LAMA4-209ENST00000453937 GRIN2BQ13224 1484 aa24.54■■□□□ 1.52
LAMA4-209ENST00000453937 RUSC2Q8N2Y8 1516 aa24.54■■□□□ 1.52
LAMA4-209ENST00000453937 ERICH3Q5RHP9 1530 aa24.5■■□□□ 1.51
LAMA4-209ENST00000453937 IGF1RP08069 1367 aa24.46■■□□□ 1.51
LAMA4-209ENST00000453937 SNAPC4Q5SXM2 1469 aa24.45■■□□□ 1.5
LAMA4-209ENST00000453937 MAGI1Q96QZ7 1491 aaPredicted RBP24.44■■□□□ 1.5
LAMA4-209ENST00000453937 ADAMTS12P58397 1594 aa24.39■■□□□ 1.5
LAMA4-209ENST00000453937 EEA1Q15075 1411 aa24.38■■□□□ 1.49
LAMA4-209ENST00000453937 CUL7Q14999 1698 aa24.34■■□□□ 1.49
LAMA4-209ENST00000453937 FHAD1B1AJZ9 1412 aa24.34■■□□□ 1.49
LAMA4-209ENST00000453937 SYNJ2O15056 1496 aa24.33■■□□□ 1.49
LAMA4-209ENST00000453937 CHD1O14646 1710 aa24.3■■□□□ 1.48
LAMA4-209ENST00000453937 CARMIL1Q5VZK9 1371 aa24.29■■□□□ 1.48
LAMA4-209ENST00000453937 CSRNP3Q8WYN3 585 aa24.27■■□□□ 1.48
LAMA4-209ENST00000453937 PRXQ9BXM0 1461 aa24.26■■□□□ 1.47
LAMA4-209ENST00000453937 GRIN2AQ12879 1464 aa24.24■■□□□ 1.47
LAMA4-209ENST00000453937 FAM9AQ8IZU1 332 aaPredicted RBP24.21■■□□□ 1.47
LAMA4-209ENST00000453937 CHMP7Q8WUX9 453 aaPredicted RBP24.2■■□□□ 1.46
LAMA4-209ENST00000453937 RAPGEF2Q9Y4G8 1499 aa24.19■■□□□ 1.46
LAMA4-209ENST00000453937 FBLN2P98095 1184 aa24.16■■□□□ 1.46
LAMA4-209ENST00000453937 NUP160Q12769 1436 aa24.15■■□□□ 1.46
LAMA4-209ENST00000453937 KIF21BO75037 1637 aa24.13■■□□□ 1.45
LAMA4-209ENST00000453937 CEP170Q5SW79 1584 aa24.13■■□□□ 1.45
LAMA4-209ENST00000453937 OSCARQ8IYS5 282 aa24.1■■□□□ 1.45
LAMA4-209ENST00000453937 CLASP1Q7Z460 1538 aa24.09■■□□□ 1.45
LAMA4-209ENST00000453937 KIAA0586Q9BVV6 1533 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms