RNA–Protein interactions for RNA: ENST00000390625.3

IGHV3-49-201, Transcript of immunoglobulin heavy variable 3-49, humanhuman

APPRIS P1 BASIC

Gene IGHV3-49, Length 439 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-49-201ENST00000390625 NISCHQ9Y2I1 1504 aa35.06■■■■□ 3.2
IGHV3-49-201ENST00000390625 ABCC9O60706 1549 aa32.06■■■□□ 2.72
IGHV3-49-201ENST00000390625 CCDC180Q9P1Z9 1646 aa31.53■■■□□ 2.64
IGHV3-49-201ENST00000390625 DNAJC5BQ9UF47 199 aa30.52■■■□□ 2.48
IGHV3-49-201ENST00000390625 RB1CC1Q8TDY2 1594 aa30.18■■■□□ 2.42
IGHV3-49-201ENST00000390625 NACADO15069 1562 aa29.86■■■□□ 2.37
IGHV3-49-201ENST00000390625 PABPN1Q86U42 306 aaKnown RBP eCLIP29.84■■■□□ 2.37
IGHV3-49-201ENST00000390625 DCAF8L2P0C7V8 631 aa29.82■■■□□ 2.36
IGHV3-49-201ENST00000390625 UNC13AQ9UPW8 1703 aa29.74■■■□□ 2.35
IGHV3-49-201ENST00000390625 BICRAQ9NZM4 1560 aa29.52■■■□□ 2.32
IGHV3-49-201ENST00000390625 MYO15BQ96JP2 1530 aa29.25■■■□□ 2.27
IGHV3-49-201ENST00000390625 ZCCHC6Q5VYS8 1495 aaKnown RBP28.98■■■□□ 2.23
IGHV3-49-201ENST00000390625 CC2D2AQ9P2K1 1620 aa28.91■■■□□ 2.22
IGHV3-49-201ENST00000390625 SCRIBQ14160 1630 aa28.89■■■□□ 2.22
IGHV3-49-201ENST00000390625 CECR2Q9BXF3 1484 aa28.83■■■□□ 2.21
IGHV3-49-201ENST00000390625 DCAF1Q9Y4B6 1507 aa28.8■■■□□ 2.2
IGHV3-49-201ENST00000390625 EIF4G1Q04637 1599 aaKnown RBP28.72■■■□□ 2.19
IGHV3-49-201ENST00000390625 SHROOM4Q9ULL8 1493 aa28.72■■■□□ 2.19
IGHV3-49-201ENST00000390625 DNAJC5Q9H3Z4 198 aa28.06■■■□□ 2.08
IGHV3-49-201ENST00000390625 NCAPD3P42695 1498 aa27.62■■■□□ 2.01
IGHV3-49-201ENST00000390625 CUX2O14529 1486 aa27.57■■■□□ 2
IGHV3-49-201ENST00000390625 ERCC6Q03468 1493 aa27.57■■■□□ 2
IGHV3-49-201ENST00000390625 ATAD2BQ9ULI0 1458 aa27.55■■■□□ 2
IGHV3-49-201ENST00000390625 NESP48681 1621 aa27.51■■□□□ 1.99
IGHV3-49-201ENST00000390625 SMARCA4P51532 1647 aa27.45■■□□□ 1.99
IGHV3-49-201ENST00000390625 HMGXB3Q12766 1538 aa27.36■■□□□ 1.97
IGHV3-49-201ENST00000390625 SMARCA2P51531 1590 aa27.35■■□□□ 1.97
IGHV3-49-201ENST00000390625 BAZ1BQ9UIG0 1483 aaKnown RBP27.22■■□□□ 1.95
IGHV3-49-201ENST00000390625 THOC2Q8NI27 1593 aaKnown RBP27.21■■□□□ 1.95
IGHV3-49-201ENST00000390625 BAZ1AQ9NRL2 1556 aaPredicted RBP27.15■■□□□ 1.94
IGHV3-49-201ENST00000390625 MROH2BQ7Z745 1585 aa27.12■■□□□ 1.93
IGHV3-49-201ENST00000390625 KIF21AQ7Z4S6 1674 aa27.11■■□□□ 1.93
IGHV3-49-201ENST00000390625 PEG3Q9GZU2 1588 aa27.1■■□□□ 1.93
IGHV3-49-201ENST00000390625 LAMC3Q9Y6N6 1575 aa27.03■■□□□ 1.92
IGHV3-49-201ENST00000390625 PDS5BQ9NTI5 1447 aa26.83■■□□□ 1.89
IGHV3-49-201ENST00000390625 WIZO95785 1651 aa26.8■■□□□ 1.88
IGHV3-49-201ENST00000390625 TRIM41Q8WV44 630 aa26.78■■□□□ 1.88
IGHV3-49-201ENST00000390625 CADPSQ9ULU8 1353 aa26.77■■□□□ 1.88
IGHV3-49-201ENST00000390625 MRC2Q9UBG0 1479 aa26.72■■□□□ 1.87
IGHV3-49-201ENST00000390625 WDR62O43379 1518 aa26.68■■□□□ 1.86
IGHV3-49-201ENST00000390625 CEP164Q9UPV0 1460 aa26.53■■□□□ 1.84
IGHV3-49-201ENST00000390625 FANCD2Q9BXW9 1451 aa26.51■■□□□ 1.83
IGHV3-49-201ENST00000390625 CFTRP13569 1480 aa26.4■■□□□ 1.82
IGHV3-49-201ENST00000390625 URB2Q14146 1524 aaKnown RBP26.39■■□□□ 1.82
IGHV3-49-201ENST00000390625 RSF1Q96T23 1441 aaPredicted RBP26.37■■□□□ 1.81
IGHV3-49-201ENST00000390625 TOP2AP11388 1531 aaKnown RBP26.29■■□□□ 1.8
IGHV3-49-201ENST00000390625 OSCARQ8IYS5 282 aa26.28■■□□□ 1.8
IGHV3-49-201ENST00000390625 ZNF608Q9ULD9 1512 aaPredicted RBP26.17■■□□□ 1.78
IGHV3-49-201ENST00000390625 PRDM2Q13029 1718 aa26.14■■□□□ 1.78
IGHV3-49-201ENST00000390625 RIMBP3CA6NJZ7 1639 aa26.13■■□□□ 1.77
IGHV3-49-201ENST00000390625 RIMBP3BA6NNM3 1639 aa26.13■■□□□ 1.77
IGHV3-49-201ENST00000390625 RIMBP3Q9UFD9 1639 aa26.13■■□□□ 1.77
IGHV3-49-201ENST00000390625 CCDC88BA6NC98 1476 aa26.07■■□□□ 1.76
IGHV3-49-201ENST00000390625 TOPBP1Q92547 1522 aa25.99■■□□□ 1.75
IGHV3-49-201ENST00000390625 IFT140Q96RY7 1462 aa25.98■■□□□ 1.75
IGHV3-49-201ENST00000390625 ARHGEF11O15085 1522 aa25.96■■□□□ 1.75
IGHV3-49-201ENST00000390625 EIF4G3O43432 1585 aaKnown RBP25.93■■□□□ 1.74
IGHV3-49-201ENST00000390625 CHD1O14646 1710 aa25.87■■□□□ 1.73
IGHV3-49-201ENST00000390625 AQRO60306 1485 aaKnown RBP eCLIP25.85■■□□□ 1.73
IGHV3-49-201ENST00000390625 DNMBPQ6XZF7 1577 aa25.82■■□□□ 1.72
IGHV3-49-201ENST00000390625 TARBP1Q13395 1621 aaKnown RBP25.82■■□□□ 1.72
IGHV3-49-201ENST00000390625 CYB5RLQ6IPT4 315 aa25.81■■□□□ 1.72
IGHV3-49-201ENST00000390625 ARAP1Q96P48 1450 aa25.73■■□□□ 1.71
IGHV3-49-201ENST00000390625 ABCC8Q09428 1581 aa25.71■■□□□ 1.71
IGHV3-49-201ENST00000390625 POLA1P09884 1462 aaPredicted RBP25.71■■□□□ 1.71
IGHV3-49-201ENST00000390625 RAD54L2Q9Y4B4 1467 aa25.71■■□□□ 1.71
IGHV3-49-201ENST00000390625 FBLN2P98095 1184 aa25.69■■□□□ 1.7
IGHV3-49-201ENST00000390625 TDRD9Q8NDG6 1382 aaKnown RBP25.63■■□□□ 1.69
IGHV3-49-201ENST00000390625 TRHP20396 242 aaPredicted RBP25.59■■□□□ 1.69
IGHV3-49-201ENST00000390625 SOGA1O94964 1423 aa25.54■■□□□ 1.68
IGHV3-49-201ENST00000390625 SNAPC4Q5SXM2 1469 aa25.53■■□□□ 1.68
IGHV3-49-201ENST00000390625 FGD5Q6ZNL6 1462 aa25.51■■□□□ 1.67
IGHV3-49-201ENST00000390625 CLASP1Q7Z460 1538 aa25.49■■□□□ 1.67
IGHV3-49-201ENST00000390625 CUX1P39880 1505 aa25.48■■□□□ 1.67
IGHV3-49-201ENST00000390625 WDR97A6NE52 1622 aa25.37■■□□□ 1.65
IGHV3-49-201ENST00000390625 CHMP7Q8WUX9 453 aaPredicted RBP25.36■■□□□ 1.65
IGHV3-49-201ENST00000390625 SYNJ1O43426 1573 aa25.33■■□□□ 1.65
IGHV3-49-201ENST00000390625 MAGI1Q96QZ7 1491 aaPredicted RBP25.33■■□□□ 1.65
IGHV3-49-201ENST00000390625 GRIN2BQ13224 1484 aa25.32■■□□□ 1.64
IGHV3-49-201ENST00000390625 PBRM1Q86U86 1689 aa25.31■■□□□ 1.64
IGHV3-49-201ENST00000390625 SYNJ2O15056 1496 aa25.28■■□□□ 1.64
IGHV3-49-201ENST00000390625 ERCC6L2Q5T890 1561 aa25.22■■□□□ 1.63
IGHV3-49-201ENST00000390625 GAPVD1Q14C86 1478 aa25.22■■□□□ 1.63
IGHV3-49-201ENST00000390625 ABCA5Q8WWZ7 1642 aa25.19■■□□□ 1.62
IGHV3-49-201ENST00000390625 ABCA10Q8WWZ4 1543 aa25.13■■□□□ 1.61
IGHV3-49-201ENST00000390625 CEP170Q5SW79 1584 aa25.06■■□□□ 1.6
IGHV3-49-201ENST00000390625 GRIN2AQ12879 1464 aa25.04■■□□□ 1.6
IGHV3-49-201ENST00000390625 ADAMTS12P58397 1594 aa25.02■■□□□ 1.6
IGHV3-49-201ENST00000390625 AEBP2Q6ZN18 517 aaPredicted RBP25.01■■□□□ 1.59
IGHV3-49-201ENST00000390625 SUPT5HO00267 1087 aaKnown RBP25■■□□□ 1.59
IGHV3-49-201ENST00000390625 NUP160Q12769 1436 aa24.96■■□□□ 1.59
IGHV3-49-201ENST00000390625 SHROOM2Q13796 1616 aa24.92■■□□□ 1.58
IGHV3-49-201ENST00000390625 BIVM-ERCC5R4GMW8 1640 aa24.91■■□□□ 1.58
IGHV3-49-201ENST00000390625 WRNQ14191 1432 aaPredicted RBP eCLIP24.91■■□□□ 1.58
IGHV3-49-201ENST00000390625 TOP2BQ02880 1626 aa24.89■■□□□ 1.57
IGHV3-49-201ENST00000390625 KIF13AQ9H1H9 1805 aa24.88■■□□□ 1.57
IGHV3-49-201ENST00000390625 FHAD1B1AJZ9 1412 aa24.85■■□□□ 1.57
IGHV3-49-201ENST00000390625 PRG4Q92954 1404 aaPredicted RBP24.78■■□□□ 1.56
IGHV3-49-201ENST00000390625 ERICH3Q5RHP9 1530 aa24.76■■□□□ 1.55
IGHV3-49-201ENST00000390625 JPH4Q96JJ6 628 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms