RNA–Protein interactions for RNA: ENST00000288513.9

SVOPL-201, Transcript of SVOP like, humanhuman

TSL 2 BASIC

Gene SVOPL, Length 1,413 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOPL-201ENST00000288513 NISCHQ9Y2I1 1504 aa34.81■■■■□ 3.16
SVOPL-201ENST00000288513 CCDC180Q9P1Z9 1646 aa30.99■■■□□ 2.55
SVOPL-201ENST00000288513 ABCC9O60706 1549 aa30.25■■■□□ 2.43
SVOPL-201ENST00000288513 RB1CC1Q8TDY2 1594 aa29.18■■■□□ 2.26
SVOPL-201ENST00000288513 NACADO15069 1562 aa29.13■■■□□ 2.25
SVOPL-201ENST00000288513 DCAF8L2P0C7V8 631 aa29.03■■■□□ 2.24
SVOPL-201ENST00000288513 ZCCHC6Q5VYS8 1495 aaKnown RBP29.02■■■□□ 2.24
SVOPL-201ENST00000288513 MYO15BQ96JP2 1530 aa28.99■■■□□ 2.23
SVOPL-201ENST00000288513 DCAF1Q9Y4B6 1507 aa28.85■■■□□ 2.21
SVOPL-201ENST00000288513 UNC13AQ9UPW8 1703 aa28.4■■■□□ 2.14
SVOPL-201ENST00000288513 PABPN1Q86U42 306 aaKnown RBP eCLIP28.23■■■□□ 2.11
SVOPL-201ENST00000288513 SCRIBQ14160 1630 aa28.23■■■□□ 2.11
SVOPL-201ENST00000288513 BICRAQ9NZM4 1560 aa28.2■■■□□ 2.1
SVOPL-201ENST00000288513 SHROOM4Q9ULL8 1493 aa28.07■■■□□ 2.08
SVOPL-201ENST00000288513 DNAJC5BQ9UF47 199 aa27.65■■■□□ 2.02
SVOPL-201ENST00000288513 EIF4G1Q04637 1599 aaKnown RBP27.51■■□□□ 1.99
SVOPL-201ENST00000288513 CC2D2AQ9P2K1 1620 aa27.37■■□□□ 1.97
SVOPL-201ENST00000288513 CECR2Q9BXF3 1484 aa27.22■■□□□ 1.95
SVOPL-201ENST00000288513 BAZ1AQ9NRL2 1556 aaPredicted RBP27.02■■□□□ 1.92
SVOPL-201ENST00000288513 SMARCA4P51532 1647 aa27.01■■□□□ 1.92
SVOPL-201ENST00000288513 SMARCA2P51531 1590 aa26.88■■□□□ 1.89
SVOPL-201ENST00000288513 NCAPD3P42695 1498 aa26.86■■□□□ 1.89
SVOPL-201ENST00000288513 ATAD2BQ9ULI0 1458 aa26.85■■□□□ 1.89
SVOPL-201ENST00000288513 MROH2BQ7Z745 1585 aa26.79■■□□□ 1.88
SVOPL-201ENST00000288513 PEG3Q9GZU2 1588 aa26.77■■□□□ 1.88
SVOPL-201ENST00000288513 HMGXB3Q12766 1538 aa26.77■■□□□ 1.88
SVOPL-201ENST00000288513 BAZ1BQ9UIG0 1483 aaKnown RBP26.68■■□□□ 1.86
SVOPL-201ENST00000288513 RSF1Q96T23 1441 aaPredicted RBP26.5■■□□□ 1.83
SVOPL-201ENST00000288513 WIZO95785 1651 aa26.49■■□□□ 1.83
SVOPL-201ENST00000288513 TOP2AP11388 1531 aaKnown RBP26.29■■□□□ 1.8
SVOPL-201ENST00000288513 LAMC3Q9Y6N6 1575 aa26.18■■□□□ 1.78
SVOPL-201ENST00000288513 NESP48681 1621 aa26.15■■□□□ 1.78
SVOPL-201ENST00000288513 ERCC6Q03468 1493 aa26.15■■□□□ 1.78
SVOPL-201ENST00000288513 CADPSQ9ULU8 1353 aa26.08■■□□□ 1.76
SVOPL-201ENST00000288513 PDS5BQ9NTI5 1447 aa26.01■■□□□ 1.75
SVOPL-201ENST00000288513 CCDC88BA6NC98 1476 aa25.92■■□□□ 1.74
SVOPL-201ENST00000288513 CFTRP13569 1480 aa25.92■■□□□ 1.74
SVOPL-201ENST00000288513 CUX2O14529 1486 aa25.88■■□□□ 1.73
SVOPL-201ENST00000288513 KIF21AQ7Z4S6 1674 aa25.86■■□□□ 1.73
SVOPL-201ENST00000288513 SUPT5HO00267 1087 aaKnown RBP25.81■■□□□ 1.72
SVOPL-201ENST00000288513 THOC2Q8NI27 1593 aaKnown RBP25.81■■□□□ 1.72
SVOPL-201ENST00000288513 FANCD2Q9BXW9 1451 aa25.78■■□□□ 1.72
SVOPL-201ENST00000288513 CEP164Q9UPV0 1460 aa25.77■■□□□ 1.72
SVOPL-201ENST00000288513 MRC2Q9UBG0 1479 aa25.73■■□□□ 1.71
SVOPL-201ENST00000288513 PRDM2Q13029 1718 aa25.73■■□□□ 1.71
SVOPL-201ENST00000288513 WDR62O43379 1518 aa25.64■■□□□ 1.7
SVOPL-201ENST00000288513 URB2Q14146 1524 aaKnown RBP25.49■■□□□ 1.67
SVOPL-201ENST00000288513 ABCC8Q09428 1581 aa25.42■■□□□ 1.66
SVOPL-201ENST00000288513 TOPBP1Q92547 1522 aa25.36■■□□□ 1.65
SVOPL-201ENST00000288513 DNMBPQ6XZF7 1577 aa25.36■■□□□ 1.65
SVOPL-201ENST00000288513 IFT140Q96RY7 1462 aa25.24■■□□□ 1.63
SVOPL-201ENST00000288513 POLA1P09884 1462 aaPredicted RBP25.14■■□□□ 1.62
SVOPL-201ENST00000288513 CUX1P39880 1505 aa25.14■■□□□ 1.62
SVOPL-201ENST00000288513 FGD5Q6ZNL6 1462 aa25.09■■□□□ 1.61
SVOPL-201ENST00000288513 TARBP1Q13395 1621 aaKnown RBP25.06■■□□□ 1.6
SVOPL-201ENST00000288513 ZNF608Q9ULD9 1512 aaPredicted RBP25.05■■□□□ 1.6
SVOPL-201ENST00000288513 SOGA1O94964 1423 aa25.03■■□□□ 1.6
SVOPL-201ENST00000288513 WRNQ14191 1432 aaPredicted RBP eCLIP25.03■■□□□ 1.6
SVOPL-201ENST00000288513 RAD54L2Q9Y4B4 1467 aa25■■□□□ 1.59
SVOPL-201ENST00000288513 EIF4G3O43432 1585 aaKnown RBP25■■□□□ 1.59
SVOPL-201ENST00000288513 DNAJC5Q9H3Z4 198 aa24.99■■□□□ 1.59
SVOPL-201ENST00000288513 TOP2BQ02880 1626 aa24.97■■□□□ 1.59
SVOPL-201ENST00000288513 WDR97A6NE52 1622 aa24.96■■□□□ 1.59
SVOPL-201ENST00000288513 BIVM-ERCC5R4GMW8 1640 aa24.96■■□□□ 1.59
SVOPL-201ENST00000288513 SYNJ1O43426 1573 aa24.92■■□□□ 1.58
SVOPL-201ENST00000288513 AQRO60306 1485 aaKnown RBP eCLIP24.9■■□□□ 1.58
SVOPL-201ENST00000288513 TDRD9Q8NDG6 1382 aaKnown RBP24.87■■□□□ 1.57
SVOPL-201ENST00000288513 ABCA10Q8WWZ4 1543 aa24.87■■□□□ 1.57
SVOPL-201ENST00000288513 GRIN2BQ13224 1484 aa24.78■■□□□ 1.56
SVOPL-201ENST00000288513 GAPVD1Q14C86 1478 aa24.76■■□□□ 1.55
SVOPL-201ENST00000288513 OSCARQ8IYS5 282 aa24.76■■□□□ 1.55
SVOPL-201ENST00000288513 ABCA5Q8WWZ7 1642 aa24.75■■□□□ 1.55
SVOPL-201ENST00000288513 SNAPC4Q5SXM2 1469 aa24.73■■□□□ 1.55
SVOPL-201ENST00000288513 MAGI1Q96QZ7 1491 aaPredicted RBP24.73■■□□□ 1.55
SVOPL-201ENST00000288513 PBRM1Q86U86 1689 aa24.7■■□□□ 1.54
SVOPL-201ENST00000288513 CHD1O14646 1710 aa24.64■■□□□ 1.54
SVOPL-201ENST00000288513 FBLN2P98095 1184 aa24.63■■□□□ 1.53
SVOPL-201ENST00000288513 SYNJ2O15056 1496 aa24.62■■□□□ 1.53
SVOPL-201ENST00000288513 CHMP7Q8WUX9 453 aaPredicted RBP24.59■■□□□ 1.53
SVOPL-201ENST00000288513 ERICH3Q5RHP9 1530 aa24.58■■□□□ 1.53
SVOPL-201ENST00000288513 ADAMTS12P58397 1594 aa24.53■■□□□ 1.52
SVOPL-201ENST00000288513 KIF27Q86VH2 1401 aa24.53■■□□□ 1.52
SVOPL-201ENST00000288513 FHAD1B1AJZ9 1412 aa24.5■■□□□ 1.51
SVOPL-201ENST00000288513 GRIN2AQ12879 1464 aa24.45■■□□□ 1.5
SVOPL-201ENST00000288513 TRIM41Q8WV44 630 aa24.43■■□□□ 1.5
SVOPL-201ENST00000288513 CLASP1Q7Z460 1538 aa24.41■■□□□ 1.5
SVOPL-201ENST00000288513 CUL7Q14999 1698 aa24.37■■□□□ 1.49
SVOPL-201ENST00000288513 ARHGEF11O15085 1522 aa24.36■■□□□ 1.49
SVOPL-201ENST00000288513 IGF1RP08069 1367 aa24.36■■□□□ 1.49
SVOPL-201ENST00000288513 RIMBP3CA6NJZ7 1639 aa24.34■■□□□ 1.49
SVOPL-201ENST00000288513 RIMBP3BA6NNM3 1639 aa24.34■■□□□ 1.49
SVOPL-201ENST00000288513 RIMBP3Q9UFD9 1639 aa24.34■■□□□ 1.49
SVOPL-201ENST00000288513 NUP160Q12769 1436 aa24.34■■□□□ 1.49
SVOPL-201ENST00000288513 CEP170Q5SW79 1584 aa24.29■■□□□ 1.48
SVOPL-201ENST00000288513 CARMIL1Q5VZK9 1371 aa24.24■■□□□ 1.47
SVOPL-201ENST00000288513 RUSC2Q8N2Y8 1516 aa24.18■■□□□ 1.46
SVOPL-201ENST00000288513 ARAP1Q96P48 1450 aa24.15■■□□□ 1.46
SVOPL-201ENST00000288513 SHROOM2Q13796 1616 aa24.14■■□□□ 1.46
SVOPL-201ENST00000288513 RAPGEF2Q9Y4G8 1499 aa24.13■■□□□ 1.45
SVOPL-201ENST00000288513 KIAA0586Q9BVV6 1533 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms