Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 Metazoa_SRP.62-201ENST00000619972 268 ntBASIC9.37□□□□□ -0.91
SVIPQ8NHG7 WEE1-201ENST00000299613 3436 ntTSL 2 BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 CACNA1C-204ENST00000347598 6655 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 PTPRR-201ENST00000283228 3529 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 STAT6-205ENST00000543873 3119 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 CADM1-212ENST00000542447 4223 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 TGOLN2-202ENST00000377386 6489 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 CR1L-203ENST00000508064 1788 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 PIP4K2C-203ENST00000540759 2876 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 TNRC6C-201ENST00000301624 9632 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 OVCH2-201ENST00000533663 1921 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 GGA3-205ENST00000578348 2251 ntTSL 2 BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 DMD-209ENST00000378702 2617 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 RPS2P45-201ENST00000469997 2057 ntBASIC9.36□□□□□ -0.91
SVIPQ8NHG7 OR6M2P-202ENST00000641780 2063 ntBASIC9.36□□□□□ -0.91
SVIPQ8NHG7 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 PITX2-212ENST00000614423 1866 ntAPPRIS ALT1 TSL 5 BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 TYK2-202ENST00000524462 3456 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 RAPGEF3-219ENST00000549151 3265 ntAPPRIS P3 TSL 5 BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 AC024257.3-201ENST00000595310 3645 ntBASIC9.36□□□□□ -0.91
SVIPQ8NHG7 AMD1P4-201ENST00000299540 1345 ntBASIC9.36□□□□□ -0.91
SVIPQ8NHG7 AL137025.1-201ENST00000436932 2378 ntTSL 2 BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 MEGF11-202ENST00000395614 3423 ntTSL 5 BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 DDR1-226ENST00000376569 3783 ntAPPRIS P3 TSL 5 BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 PPARD-203ENST00000360694 3747 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 ME2P1-201ENST00000426028 1970 ntBASIC9.36□□□□□ -0.91
SVIPQ8NHG7 FPR1-203ENST00000595042 1965 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 ZSCAN31-202ENST00000396838 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 CTCFL-222ENST00000609232 3668 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 CREBRF-205ENST00000522692 2466 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 CNGA3-203ENST00000393504 3841 ntAPPRIS P3 TSL 5 BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 AC003958.1-201ENST00000435883 421 ntBASIC9.36□□□□□ -0.91
SVIPQ8NHG7 AP003171.2-201ENST00000528208 925 ntBASIC9.36□□□□□ -0.91
SVIPQ8NHG7 AC104982.2-201ENST00000584258 893 ntTSL 5 BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC9.36□□□□□ -0.91
SVIPQ8NHG7 SLC16A1-AS1-207ENST00000627431 1073 ntTSL 5 BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 FAM238C-202ENST00000639963 1787 ntTSL 2 BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 ETFDH-206ENST00000511912 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 FCRLA-213ENST00000540521 1942 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 ZNF461-204ENST00000588268 2584 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 PABPC3-201ENST00000281589 3387 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 CARF-216ENST00000444724 2854 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 AC104134.1-201ENST00000413234 1747 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 PC-204ENST00000524491 1714 ntTSL 2 BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 CLCN4-202ENST00000380833 6750 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 VDR-202ENST00000395324 4762 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 CNOT3-202ENST00000358389 4118 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 ADD2-205ENST00000413157 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SVIPQ8NHG7 PCDHA4-204ENST00000618834 10557 ntBASIC9.35□□□□□ -0.91
SVIPQ8NHG7 CARF-213ENST00000438828 3574 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SVIPQ8NHG7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SVIPQ8NHG7 AL445231.1-201ENST00000445523 1814 ntTSL 2 BASIC9.35□□□□□ -0.91
SVIPQ8NHG7 RBM10-203ENST00000377604 3747 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
SVIPQ8NHG7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC9.35□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms